Basic Information

Insect: Halyomorpha halys
Gene Symbol: -
Assembly: GCA_000696795.2
Location: NW:130444-141351[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 6.8e-05 0.0027 17.6 0.5 1 23 160 183 160 183 0.97

2 18 2.9e-06 0.00011 21.9 0.2 2 23 188 209 188 209 0.97

3 18 6.4 2.5e+02 1.9 0.3 2 13 244 255 243 257 0.87

4 18 0.37 15 5.8 1.0 2 21 326 344 325 345 0.92

5 18 0.074 3 8.0 0.3 2 20 374 392 373 397 0.91

6 18 0.00042 0.017 15.1 0.0 2 21 473 492 472 493 0.94

7 18 0.0081 0.32 11.0 0.7 2 21 497 516 496 520 0.89

8 18 0.0061 0.25 11.4 6.4 1 23 539 561 539 561 0.98

9 18 2.1 84 3.4 0.1 3 23 570 591 569 591 0.92

10 18 0.022 0.88 9.7 4.3 1 23 596 618 596 618 0.95

11 18 0.0011 0.042 13.8 0.8 1 23 622 645 622 645 0.95

12 18 7.4e-05 0.0029 17.5 0.4 2 23 651 672 651 672 0.97

13 18 1.8e-05 0.00074 19.3 1.3 2 23 679 700 678 700 0.96

14 18 0.0047 0.19 11.8 0.4 2 23 707 728 707 728 0.96

15 18 6.6e-06 0.00026 20.7 1.1 1 23 734 756 734 756 0.99

16 18 1.8e-06 7.3e-05 22.5 0.8 1 23 760 782 760 782 0.99

17 18 8.8e-07 3.5e-05 23.5 1.8 1 23 788 810 788 810 0.98

18 18 1.9 76 3.6 6.3 1 23 816 839 816 839 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	6.8e-05	0.0027	17.6	0.5	1	23	160	183	160	183	0.97
2	18	2.9e-06	0.00011	21.9	0.2	2	23	188	209	188	209	0.97
3	18	6.4	2.5e+02	1.9	0.3	2	13	244	255	243	257	0.87
4	18	0.37	15	5.8	1.0	2	21	326	344	325	345	0.92
5	18	0.074	3	8.0	0.3	2	20	374	392	373	397	0.91
6	18	0.00042	0.017	15.1	0.0	2	21	473	492	472	493	0.94
7	18	0.0081	0.32	11.0	0.7	2	21	497	516	496	520	0.89
8	18	0.0061	0.25	11.4	6.4	1	23	539	561	539	561	0.98
9	18	2.1	84	3.4	0.1	3	23	570	591	569	591	0.92
10	18	0.022	0.88	9.7	4.3	1	23	596	618	596	618	0.95
11	18	0.0011	0.042	13.8	0.8	1	23	622	645	622	645	0.95
12	18	7.4e-05	0.0029	17.5	0.4	2	23	651	672	651	672	0.97
13	18	1.8e-05	0.00074	19.3	1.3	2	23	679	700	678	700	0.96
14	18	0.0047	0.19	11.8	0.4	2	23	707	728	707	728	0.96
15	18	6.6e-06	0.00026	20.7	1.1	1	23	734	756	734	756	0.99
16	18	1.8e-06	7.3e-05	22.5	0.8	1	23	760	782	760	782	0.99
17	18	8.8e-07	3.5e-05	23.5	1.8	1	23	788	810	788	810	0.98
18	18	1.9	76	3.6	6.3	1	23	816	839	816	839	0.97

Sequence Information

Coding Sequence: atgaagagaaaagtgaaatatttagaCATGGAGAACCTTGCATCTAAGCAATTTAGTTGCTTTGTTTGTACAGAGAAGTCGAAAGAAAAAGGAATATCCTTATTACAGTCCCAAACTGCATTTTCGCGGATATCTTTAGGTCAAAAGCTTCAAGAAATTCTGGGCACCAAGTATGTGGTTCTTGTTACTTACAGAGATTCAATATGTTGGGATTGTGCCAGCTATATAAATTGGGTTGATCGTTGTGAACATAAAGTGGATTTAGTGAAAGAATACATAGTTAATCaagttagtttaaaatataggaAGATCGAAGTAACACTTCaagaaaatgttgaaaattctGAGCCAATGCAAGAAACAGTTCTCAAACAGAAACCAACTACTCCACCTTTACCAGCAGTTATGCCTATCCAGCATACTgaAACAAAAGAGATTAAAGAAGATCCTCCTCCTaaggctagaaaaaaaaaagaatactcaTGTAAATACTGTGGTAAAGGCTATGTTAGCTTGATGTCATTGAGTATGCACATTCAAAGGCTGCATGGCGGTAAAGAGGTTTGCGAAGATTGTGGTGCCAGATTTGAGACATTGGCACAACTTAAAAGACACATGAAGAGTCATATTTCTGCAGATAAACAACTAACCTGTGTCTCATGTGGTTTTCATACAACAAATACTGAGGTTTATTGTCGACATGTTTGTAATTCAAGCATTGTTTCATTAACATGCGTTACTTGCAATAAAagGTATGTCGATTCCAACTTCAAAAATGATTCCAGTTCTGGTACTTATCAATGTCAATCTTGTACTGCAGATGAAACAACGAGAATTGAGCAAGATCAACCTCCCCAGgaAGAAAATACTGGTGCTGAACTAGCCACAGAAATGCCCGAGTTTTTTAAGGATCCTGAAAACAATAATGAAGTCAGAACTTTAGAAAGGAGTGAAGAAGAATGTATATCTTACTTACGATGTGAAGGTTGTGAGGAGCAATTTAAACTTGGTGATTTAACAAAACATCTGTGTTTTATTAGGGGGGACACAGTGGAGTTCGTTGAAGTGGAGGCGCCTACCTTTCAAGGAAAGAAGAGCCAACCTACTTCTGTTCCTTTATATTGCAAAGATTGTGGTGATCAATTTGTGAATATTGAAGACTTACGGAATCATTGGGATCATACTGGCCATTTAAGACAGGTAAGCACTACAGCTGTTGAACTCAATAAAATTAGAGACAAGTATAAGAAAACAGAAGCTACTTTTAAAGTCGTTAAACAGAATTTTAATATTCGTGCCATAATACCTGGTCAAAATGAAGAGGCACTACGTTCTGCTGATGATTATAAGGATATGTTTGTTAAGGTTAGCAGAAATACTGATTCTATTGAAGATTTTGTAAGGAAAGATGGCAAAGAGTGTGAAACATGTGGTATTGTTTTTGCTAATAAAGAGCTTCTAGAAGAACATCAACAAATGGATTGCCTCACATGTGTTACTTGCTCTGTTTCGTTCTATGATAACAAACTACTCAAAAGACATTATCTTTACACAGGGCATGCTAATAGGATCATTCAGCCACCTCAATCGGTGGCAGATAAAGAACCTATGGGATTCAAATGCCATCGCTGTGTTAAGACATTTCAATCTAGATTTCTACTGAAAAAACACTTTCAGGTTCATTACCGAGGTACAAATAAAGGTGCTTGTCAATTTTGTCTTctagaatttgaaaataaaaatgatatccaGCAGCATGTTCTTGAAGTACATGGTGCACATTTATATAAATGCAGTCATTGCGATCGTACATTTATGTCAGAAACATTTAGGAATAGACACGAAGCAAAACATAAGGGTCCCTTTGAATGTCAGATAtgcaacataaaatttattagtaaaaaatcacTACTATTGCATAATGAAACATATCACCAAGGAGAATCAGGTTCCTGTACTCTGTGTGGAAAAGTTTTTGAAGATCTTTTAGCTCTTAGGAAACATGAAAGACgtcattattttgagaaacagtTAAATTGTGATGTGTGTAAGAAgagatttagaaataaaactcTTCTAATCACTCATTTGAAAATACATGGAGATAAAATCAAAGCTAAATGTGATGTTTGTCAGCTTGGCTTCACTACTGAGGAAGcgttaaaagaacataaattttcTCATATGAAGCCTGGAAGATACAAATGTCCAAGATGTAATCTTTCTTTTGCAAACAAAGCAAATTTTTGGATGCATACAAAGACACATGAAGCATGCTATGTTTGTACAGTTTGTAATAGAAGTTTTAGAGATACATCTTTGTTAGCTGTACACCGAAGAAAACATTGGCGTGTTAGGCCTTACCAATGTCCACATTGTCCTCGCACATTTTCTGTACCTGCAACTTTAAGGAGACATCTGCATGTACATACTCGTATTTATCCGCATAAATGTGGTCTTTGTAAAAGAGGTTTCCTCACGAGACATGCTTACCATAGGCATACTGAAACAGTGCATGGTGTTTCTCACAACTTCCCCCAAAGGAGGCCTAATATCCCTTCGTTGCCATTGAATGCAACTGATGAAGATATCTTCCAAGCTGCTGATACTCTTATTGCTGATGattcattaatgtttaatgaTTATCAAAATAAAGAGATTGAGCAGGTTTCATCATCTGATCTTATTACCAATGAAGTAGTTGTTGAAACAACTGagttatttgatgaaattttgcATTGA
Protein Sequence: MKRKVKYLDMENLASKQFSCFVCTEKSKEKGISLLQSQTAFSRISLGQKLQEILGTKYVVLVTYRDSICWDCASYINWVDRCEHKVDLVKEYIVNQVSLKYRKIEVTLQENVENSEPMQETVLKQKPTTPPLPAVMPIQHTETKEIKEDPPPKARKKKEYSCKYCGKGYVSLMSLSMHIQRLHGGKEVCEDCGARFETLAQLKRHMKSHISADKQLTCVSCGFHTTNTEVYCRHVCNSSIVSLTCVTCNKRYVDSNFKNDSSSGTYQCQSCTADETTRIEQDQPPQEENTGAELATEMPEFFKDPENNNEVRTLERSEEECISYLRCEGCEEQFKLGDLTKHLCFIRGDTVEFVEVEAPTFQGKKSQPTSVPLYCKDCGDQFVNIEDLRNHWDHTGHLRQVSTTAVELNKIRDKYKKTEATFKVVKQNFNIRAIIPGQNEEALRSADDYKDMFVKVSRNTDSIEDFVRKDGKECETCGIVFANKELLEEHQQMDCLTCVTCSVSFYDNKLLKRHYLYTGHANRIIQPPQSVADKEPMGFKCHRCVKTFQSRFLLKKHFQVHYRGTNKGACQFCLLEFENKNDIQQHVLEVHGAHLYKCSHCDRTFMSETFRNRHEAKHKGPFECQICNIKFISKKSLLLHNETYHQGESGSCTLCGKVFEDLLALRKHERRHYFEKQLNCDVCKKRFRNKTLLITHLKIHGDKIKAKCDVCQLGFTTEEALKEHKFSHMKPGRYKCPRCNLSFANKANFWMHTKTHEACYVCTVCNRSFRDTSLLAVHRRKHWRVRPYQCPHCPRTFSVPATLRRHLHVHTRIYPHKCGLCKRGFLTRHAYHRHTETVHGVSHNFPQRRPNIPSLPLNATDEDIFQAADTLIADDSLMFNDYQNKEIEQVSSSDLITNEVVVETTELFDEILH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01298613;
90% Identity: iTF_01298613;
80% Identity: -