Basic Information

Insect: Halyomorpha halys
Gene Symbol: -
Assembly: GCA_000696795.2
Location: NW:108019-136160[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.0041 0.16 12.0 0.4 2 23 11 32 10 33 0.95

2 27 0.023 0.92 9.6 4.1 1 23 66 89 66 89 0.96

3 27 0.0001 0.0041 17.0 3.0 1 23 95 118 95 118 0.95

4 27 0.26 10 6.3 9.6 1 23 124 147 124 147 0.96

5 27 2.4e-05 0.00096 19.0 1.8 1 23 153 176 153 176 0.97

6 27 0.0014 0.057 13.4 4.5 1 23 182 204 182 205 0.95

7 27 0.0039 0.15 12.0 6.4 1 23 211 234 211 234 0.96

8 27 0.00015 0.0059 16.5 2.8 1 23 240 263 240 263 0.96

9 27 9.4e-05 0.0038 17.1 4.9 1 23 269 292 269 292 0.96

10 27 0.00039 0.016 15.2 2.7 1 23 298 321 298 321 0.94

11 27 0.0017 0.07 13.1 2.1 1 23 327 350 327 350 0.97

12 27 0.00076 0.03 14.3 3.4 1 23 356 378 356 378 0.98

13 27 0.00026 0.01 15.7 3.2 1 23 384 407 384 407 0.97

14 27 7.6e-05 0.003 17.4 2.9 1 23 413 436 413 436 0.98

15 27 0.084 3.3 7.8 2.5 2 23 552 573 551 574 0.92

16 27 0.00059 0.024 14.6 3.6 1 23 580 603 580 603 0.95

17 27 0.00029 0.011 15.6 4.1 1 23 609 632 609 632 0.95

18 27 0.014 0.56 10.3 3.9 1 23 638 661 638 661 0.95

19 27 0.0031 0.12 12.3 3.5 1 23 667 690 667 690 0.95

20 27 0.0056 0.22 11.5 5.3 1 23 696 719 696 719 0.97

21 27 0.00047 0.019 14.9 0.7 1 23 725 748 725 748 0.94

22 27 0.0029 0.12 12.4 1.9 1 23 754 777 754 777 0.95

23 27 0.00097 0.039 13.9 4.8 1 23 783 806 783 806 0.98

24 27 0.0045 0.18 11.8 3.0 1 23 812 835 812 835 0.97

25 27 0.0075 0.3 11.1 4.5 1 23 841 863 841 864 0.95

26 27 8.9e-05 0.0036 17.2 2.3 1 23 870 893 870 893 0.95

27 27 0.0015 0.061 13.3 0.6 3 23 901 922 900 922 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.0041	0.16	12.0	0.4	2	23	11	32	10	33	0.95
2	27	0.023	0.92	9.6	4.1	1	23	66	89	66	89	0.96
3	27	0.0001	0.0041	17.0	3.0	1	23	95	118	95	118	0.95
4	27	0.26	10	6.3	9.6	1	23	124	147	124	147	0.96
5	27	2.4e-05	0.00096	19.0	1.8	1	23	153	176	153	176	0.97
6	27	0.0014	0.057	13.4	4.5	1	23	182	204	182	205	0.95
7	27	0.0039	0.15	12.0	6.4	1	23	211	234	211	234	0.96
8	27	0.00015	0.0059	16.5	2.8	1	23	240	263	240	263	0.96
9	27	9.4e-05	0.0038	17.1	4.9	1	23	269	292	269	292	0.96
10	27	0.00039	0.016	15.2	2.7	1	23	298	321	298	321	0.94
11	27	0.0017	0.07	13.1	2.1	1	23	327	350	327	350	0.97
12	27	0.00076	0.03	14.3	3.4	1	23	356	378	356	378	0.98
13	27	0.00026	0.01	15.7	3.2	1	23	384	407	384	407	0.97
14	27	7.6e-05	0.003	17.4	2.9	1	23	413	436	413	436	0.98
15	27	0.084	3.3	7.8	2.5	2	23	552	573	551	574	0.92
16	27	0.00059	0.024	14.6	3.6	1	23	580	603	580	603	0.95
17	27	0.00029	0.011	15.6	4.1	1	23	609	632	609	632	0.95
18	27	0.014	0.56	10.3	3.9	1	23	638	661	638	661	0.95
19	27	0.0031	0.12	12.3	3.5	1	23	667	690	667	690	0.95
20	27	0.0056	0.22	11.5	5.3	1	23	696	719	696	719	0.97
21	27	0.00047	0.019	14.9	0.7	1	23	725	748	725	748	0.94
22	27	0.0029	0.12	12.4	1.9	1	23	754	777	754	777	0.95
23	27	0.00097	0.039	13.9	4.8	1	23	783	806	783	806	0.98
24	27	0.0045	0.18	11.8	3.0	1	23	812	835	812	835	0.97
25	27	0.0075	0.3	11.1	4.5	1	23	841	863	841	864	0.95
26	27	8.9e-05	0.0036	17.2	2.3	1	23	870	893	870	893	0.95
27	27	0.0015	0.061	13.3	0.6	3	23	901	922	900	922	0.95

Sequence Information

Coding Sequence: ATGATGTCTAATAGAGCTGAGAACACTCTTAAATGTCcttattgtgaatataaagttgtagaaaaaagtcttatcataaaacatataatggTACATCATTCAATTCAGAAGAGGAAGTGTCctctttataaatatgaaacagtgcctactaatttaaaacatcataaaattagCTGTCATGCAGATgagaagttctatcaatgtcattactgttattatagagcagtaaaaaaaagtcatgtaaaGCAACATATAATGGCTCTTCATACTGGTGATAAGCCTCATAAGTGCccttattgtgattataaagcAACACAAAGTGTACATTTGAAAAGACATATAATGGCCTAtcatactggtgagaagcctcataaGTGTCCTCATTGCGATTATGAAGCAACCCAAATTTGTCATTTGAAAAAGCATATTATGCACcgtcatacaggtgagaagcctTATAAGTGCCCTCATTGTGACTATAAAGCCACTCAAAGTGATACTTTGAAAAGACATGTAATGTCCCTTCATATAGAGGAGAAGCCTCataaatgtcctcattgtgactaTAAAGCAGCACAAAGTGGTTATTTGAAAACACATATAATGCAACATCATACTTATGAGAAGCCTCATAAGTGTCCgcattgtgattataaaacaACTCAAATTGGTTATTTGAAAAAGCATATAATGCACCGCCATAtaggtgagaagcctcataaatgtcctcattgtgactaTAAAGCCACACAACGGGCTACTTTGAAAAGACATATAATATCTCTTCATACAGAAGAGAAGCCTTATAAGTGTCCTTATTGTGACTATAAATCAACACAAAGTGGTCATTTGAAAACACATATAATGCACCGTCATACATGTGAGAAGCCTCATAAGTGCCCTAATTGTGACtataaaacaacacaaataagcaaTTTGAAACACCATGTAATGGCTCTtcatactggtgagaagcctcataagtgtcctcattgtgattataaagcaACACAAATCGGTACTTTGAAAACACACATCCTGTCCCTTCATACAGATGAGAAGCCTCATAAGTGTCCTCATTGCGATTATAAAACATCACTAATTGGTAATTTGAAAACTCACATAATGCGTCATACAGGTGAGAAACCTCATAAGTGTCCTTATTGTGACTTTAGAGCAACACAAAGTTTTAGTTTGAAAAGACATATAATGTCCTTtcatactggtgagaagcctcataagtgtcctcattgtgattacaAAGCAACACAAATTGGTAGTTTGAAAAGACATATGATGACCCTTCACACAGATGATAAGCCTCATGAAATTGCATTGTGTGACATTTCTTTTAGAAGAATGGATCAAATTGATATAAGTAACActggtattttaattaaagaagaaattactGTGAAGATGGAGCCCTGCATGTCCATGAATGATATTAAAGAAGAGGAAATACAAGAGTTCGATTGTGaTGAAAATAACTCtgatatttcaattaaagaagaaataactgATAAGACCAATTCCTCTGgggCCATAGATTCTGTTTACCAGACAAAGAAGATCAAACAATATGATTTGGTATCTACCTTCAACATCAATTCGAAGAAAGGTAGTAGGTCTAATACAGTTGAGAACCCTAATAAATGTCCTTATTGTGACCATAAAGCATTACAAATTGGTAATTTGAAAAGACATATCATGAACCACCATtcaggtgagaagcctcataaatgtcctcattgtgacttTAATACAGCAACCAAACGTaatttgaaaatacatataatgtTCCTACATACTGGTGAGAGGCCTCAtaagtgtcctcattgtgactaTAGTGCAGTTACTAAAAGTTGtttaaacaaacatataatGGCCCTTCATACTGGGGAGAAGCCTCATAAGTGTTCTTATTGTGACTATAAAGCAACACAGATTTGTcaattgaaaaaacatataatggcccttcatactggtgagaagcctcacAAGTGTTCTCATTGTGACTATAGAGCAACACAAATGGGTTCTTTGAAAAATCATATGATGGCCTTTCATACAGATGAGAAGCCTCAtaagtgtcctcattgtgaccATAGAACTAAACTAAGTATTCTTTTGaaaagacatataatgtctCTTCACTCTGGTGAGAAACCTCATATTTGTCCTTATTGCGATTATAAAGCAACACAAATTGGCAATTTGAAAAGACATATCATTTATCGTCATACAAGTGACAAGCCTCATAAGTGTTATCATTGCGATTATAAAACAGCTACAGTGGGTAATTTAAAGGAACATATAATGGCCCTTCAcactggtgagaagcctcataaGTGTCCCCATTGTGAATACAAAGCTACACGAAATGGTGCTCTGAGAAATCATATAATGACTTGTCATACTGATGATAAACCTCataaatgtcctcattgtgactaTAGAGCTAAACTAAGTGGTCGTCTGAAAAGACATATAATGTCCCTTCACACTAATGAGAAGCCTCAtaagtgtcctcattgtgattataaagctACACGGattgattatttgaaaacacATGTAATGGCTCACCATATAGGCGAGAGACCTCATAAGTGTCCccattgtgattataaagcaACACAAATTAGTAATTTGAAAAAGCATATAATGGCTCTTCATACAGGTAAGAAGGCTCGTAATTGTCCTCATTGTGACTTTAATACAGCAACAGTAAGTAATTTAAAGGAACACATAAAGGCCCTCCACAAAGATGAGAAGTCTTATAAGGGCCCTTCACAAAGGTGA
Protein Sequence: MMSNRAENTLKCPYCEYKVVEKSLIIKHIMVHHSIQKRKCPLYKYETVPTNLKHHKISCHADEKFYQCHYCYYRAVKKSHVKQHIMALHTGDKPHKCPYCDYKATQSVHLKRHIMAYHTGEKPHKCPHCDYEATQICHLKKHIMHRHTGEKPYKCPHCDYKATQSDTLKRHVMSLHIEEKPHKCPHCDYKAAQSGYLKTHIMQHHTYEKPHKCPHCDYKTTQIGYLKKHIMHRHIGEKPHKCPHCDYKATQRATLKRHIISLHTEEKPYKCPYCDYKSTQSGHLKTHIMHRHTCEKPHKCPNCDYKTTQISNLKHHVMALHTGEKPHKCPHCDYKATQIGTLKTHILSLHTDEKPHKCPHCDYKTSLIGNLKTHIMRHTGEKPHKCPYCDFRATQSFSLKRHIMSFHTGEKPHKCPHCDYKATQIGSLKRHMMTLHTDDKPHEIALCDISFRRMDQIDISNTGILIKEEITVKMEPCMSMNDIKEEEIQEFDCDENNSDISIKEEITDKTNSSGAIDSVYQTKKIKQYDLVSTFNINSKKGSRSNTVENPNKCPYCDHKALQIGNLKRHIMNHHSGEKPHKCPHCDFNTATKRNLKIHIMFLHTGERPHKCPHCDYSAVTKSCLNKHIMALHTGEKPHKCSYCDYKATQICQLKKHIMALHTGEKPHKCSHCDYRATQMGSLKNHMMAFHTDEKPHKCPHCDHRTKLSILLKRHIMSLHSGEKPHICPYCDYKATQIGNLKRHIIYRHTSDKPHKCYHCDYKTATVGNLKEHIMALHTGEKPHKCPHCEYKATRNGALRNHIMTCHTDDKPHKCPHCDYRAKLSGRLKRHIMSLHTNEKPHKCPHCDYKATRIDYLKTHVMAHHIGERPHKCPHCDYKATQISNLKKHIMALHTGKKARNCPHCDFNTATVSNLKEHIKALHKDEKSYKGPSQR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00764330;
90% Identity: iTF_00764330;
80% Identity: iTF_00764330;