Basic Information

Insect: Halyomorpha halys
Gene Symbol: -
Assembly: GCA_000696795.2
Location: NW:20475-40531[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.026 1 9.5 0.1 2 23 133 154 132 155 0.94

2 24 0.00013 0.0051 16.7 0.6 1 23 160 183 160 183 0.98

3 24 0.0013 0.054 13.5 4.2 1 23 218 241 218 241 0.96

4 24 3.6e-05 0.0014 18.4 1.5 1 23 247 270 247 270 0.97

5 24 2.9e-05 0.0011 18.7 2.7 1 23 276 299 276 299 0.97

6 24 0.00024 0.0094 15.9 3.6 1 23 305 328 305 328 0.97

7 24 4.6e-06 0.00018 21.3 0.4 1 23 334 357 334 357 0.98

8 24 9.9e-05 0.0039 17.0 2.5 1 23 363 386 363 386 0.97

9 24 0.00011 0.0043 16.9 5.4 1 23 392 415 392 415 0.97

10 24 0.0018 0.072 13.1 8.1 1 23 421 443 421 444 0.96

11 24 0.00014 0.0055 16.6 4.7 1 23 450 473 450 473 0.95

12 24 0.00087 0.035 14.1 2.7 1 23 479 502 479 502 0.97

13 24 0.00059 0.024 14.6 0.9 2 23 509 531 508 531 0.93

14 24 0.00058 0.023 14.6 3.5 1 23 537 560 537 560 0.97

15 24 0.011 0.44 10.6 3.7 1 23 566 588 566 589 0.95

16 24 7.5e-05 0.003 17.4 4.9 1 23 595 618 595 618 0.97

17 24 5.9e-05 0.0023 17.8 1.4 2 23 625 647 624 647 0.97

18 24 0.026 1 9.4 4.1 1 23 653 676 653 676 0.97

19 24 0.00033 0.013 15.4 2.8 1 23 682 705 682 705 0.96

20 24 0.00066 0.026 14.5 2.0 1 23 711 734 711 734 0.97

21 24 0.00034 0.014 15.3 5.4 1 23 740 762 740 763 0.95

22 24 0.00079 0.032 14.2 2.0 1 23 769 792 769 792 0.97

23 24 0.02 0.79 9.8 0.2 1 23 798 821 798 821 0.96

24 24 6.2e-05 0.0025 17.7 3.5 1 23 827 849 827 849 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.026	1	9.5	0.1	2	23	133	154	132	155	0.94
2	24	0.00013	0.0051	16.7	0.6	1	23	160	183	160	183	0.98
3	24	0.0013	0.054	13.5	4.2	1	23	218	241	218	241	0.96
4	24	3.6e-05	0.0014	18.4	1.5	1	23	247	270	247	270	0.97
5	24	2.9e-05	0.0011	18.7	2.7	1	23	276	299	276	299	0.97
6	24	0.00024	0.0094	15.9	3.6	1	23	305	328	305	328	0.97
7	24	4.6e-06	0.00018	21.3	0.4	1	23	334	357	334	357	0.98
8	24	9.9e-05	0.0039	17.0	2.5	1	23	363	386	363	386	0.97
9	24	0.00011	0.0043	16.9	5.4	1	23	392	415	392	415	0.97
10	24	0.0018	0.072	13.1	8.1	1	23	421	443	421	444	0.96
11	24	0.00014	0.0055	16.6	4.7	1	23	450	473	450	473	0.95
12	24	0.00087	0.035	14.1	2.7	1	23	479	502	479	502	0.97
13	24	0.00059	0.024	14.6	0.9	2	23	509	531	508	531	0.93
14	24	0.00058	0.023	14.6	3.5	1	23	537	560	537	560	0.97
15	24	0.011	0.44	10.6	3.7	1	23	566	588	566	589	0.95
16	24	7.5e-05	0.003	17.4	4.9	1	23	595	618	595	618	0.97
17	24	5.9e-05	0.0023	17.8	1.4	2	23	625	647	624	647	0.97
18	24	0.026	1	9.4	4.1	1	23	653	676	653	676	0.97
19	24	0.00033	0.013	15.4	2.8	1	23	682	705	682	705	0.96
20	24	0.00066	0.026	14.5	2.0	1	23	711	734	711	734	0.97
21	24	0.00034	0.014	15.3	5.4	1	23	740	762	740	763	0.95
22	24	0.00079	0.032	14.2	2.0	1	23	769	792	769	792	0.97
23	24	0.02	0.79	9.8	0.2	1	23	798	821	798	821	0.96
24	24	6.2e-05	0.0025	17.7	3.5	1	23	827	849	827	849	0.97

Sequence Information

Coding Sequence: ATGGATCGAATGGGTATATATAATTGTGTttctataaaagaagaaatacaaGATGAAACTGTGCCAAATTGTATAAGCAACTCTGGCATTTcagttaaagaagaaataactgACTCGAATGAACTCTTTCTTCCCTTGACTGATATTAAAGAAGAGGAAACACTGGAAATCTATgatgATATAAGTAACCCTGGTATTtcaattaaagaagaaataagtgATGAAACTGATCCCTCCGtttctCTTACTGATATTACTGAAAAGGAAATACCAGAAATCTCTAATGgaaccAATGACTATCTATGCCAGACAAAGAAGATGAAACAGTATGGTTTGGAATCTGCAGTCATCAATTTGAAGGAATTTAAAATGTCTAATATAACTGAGAAGCCTCTTGAATGTCCTTATTGTGAATTTACAGTTGTAGAAAAAAGTCTTATAGTAAGACATATAATGGCTCATCATACAACTAAGAAGTACaagtgtcctcattgtgaatatgtAGCAACAGTATCTACTAacttaaaacttcatattattaccAATCATACAAATAACAATCTCTATCAATGTcatcattgtgaatataaagcagtaaaaaaatgcattattaagCAACACCTAATATCACTTCATAGTGGTGATAGGCATCATAAGTGTCCCCATTGTCCCTATAAAGCAACCCGAATTGCTCATTTGAAAAGACATATTACGTCCCTTCATACTGATGCGAAGCCTCATAAGTGTCCTTATTGTGACTATAGAGCAACACAAAGTGGTAATATGAAAAGACATATTATGTCCCTTCATATTGGtgatagaccttataattgtcctcattgtgattataaagcaACCCAAAGTGCTCATTTAAAAAGACACATAATGTCACTGCATACTGATGAGAAGCCTCAtaagtgtcctcattgtgactaTAAAGCAACACAATACAGTACtttaaaaacacatattatAACCCTTCATACTGATGAGAGGCCTTATAAGTGTCCACTTTGTGACTATAAAGCAACCCAAAGTGGTAATTTGAAAAGACATATAATGTCCCTTCATACTGAAGAGAGGTCTCATAAGTGTCCTTATTGTCATTATGAAGCAACACAAAGTGGCAATTTGAAGACACATATAATGTCCCTTCATACTGATGCGAAGCCTCAtaagtgtcctcattgtgattataaagcgACACAAAGTAGTCATTTGAAAAGTCATATAATGTCCCTTCACACATATGAGAGGCCTCAtaagtgtcctcattgtgattataaagggacacaaattcataatttaaaaaaacatataatgtccCATCATACTAATGAAAGACCTCATAAATGTCCTCATTGTAACTATAAAGCAACACAAAGTGACCATTTGAAAAGACATATAATGGCCCTTCATACTGGTGATAGGCCTCataaatgtcctcattgtgattataaagcaACACAACTTGGTACTTTGAAATCACATTTAATGTCCCTCCATAGTAATGAAAAGCCTCTtaaatgtcctcattgtgattacaAAGCATCTCAAATTCGTAATCTGAAAAGACATTTATTGGCACTTCATTCTGGCGAGGAGGCTCATAAATGTCCATATTGTGATTATAAAGCAAAACAAAGTGCTTGtttgaaaaatcatattatgTCCCTTCATACTGGAGATAGACCTCAtaagtgtcctcattgtgattataaagcaAACAAAGCTGCTACTTTGAAGACACATGTAATGGCACACCACACTGGTGATAGGCCACAtaagtgtcctcattgtgactaTAAAGCAACCCAAAGTGCTCATTTGAAAAGACATATAATGTCCCTTCATACTAATGAAAAACCTCTtaagtgtcctcattgtgattataaagcaTCACAAATTCGTAACTTGAAGAGACATATAATGACCCTCCATACTGTAGAGAAACCTCATAAGTGTTCTCATTGTGActtcaaaacaaaactaattcgtaatttgaaaatacatataataaccCTTCATgctggtgagaagcctcataaTTGTccttattgtgattataaagcAAAACAGAGtgttcatttgaaaaatcatataatgtcTCTTCATACTGGTGAGAGGCCTCATaaatgtcctcactgtgattacAAAGCAACACAAGTCGCTAGTTTGAAAACTCATATAATGTCCCTTCATACTGGTGAAAGGCCTCAtaagtgtcctcattgtgattacaAAGCAACACAAAGtggttatttgaaaaaacatataatatctcATCATACACATGAGAAGCCTCATAAGTGTCCTTATTGCGATTATAATGCAACTCAAATTCGTcatttgaaaattcatataatgtCCATTCATACTGGTGATAGACCTTATAAATGCTCTCAGTGTGCTTATGAAGCAACTCAAACTGCTCtattgaaaaaacatataatggccATGCATACTGGAGATAGGCCTCATATATGTccttattgtgattataaagcAACACAAAGTGCTCATTTGAAAAAACATATGTCTCGTCATACTGTTGATAGACCacatttctaa
Protein Sequence: MDRMGIYNCVSIKEEIQDETVPNCISNSGISVKEEITDSNELFLPLTDIKEEETLEIYDDISNPGISIKEEISDETDPSVSLTDITEKEIPEISNGTNDYLCQTKKMKQYGLESAVINLKEFKMSNITEKPLECPYCEFTVVEKSLIVRHIMAHHTTKKYKCPHCEYVATVSTNLKLHIITNHTNNNLYQCHHCEYKAVKKCIIKQHLISLHSGDRHHKCPHCPYKATRIAHLKRHITSLHTDAKPHKCPYCDYRATQSGNMKRHIMSLHIGDRPYNCPHCDYKATQSAHLKRHIMSLHTDEKPHKCPHCDYKATQYSTLKTHIITLHTDERPYKCPLCDYKATQSGNLKRHIMSLHTEERSHKCPYCHYEATQSGNLKTHIMSLHTDAKPHKCPHCDYKATQSSHLKSHIMSLHTYERPHKCPHCDYKGTQIHNLKKHIMSHHTNERPHKCPHCNYKATQSDHLKRHIMALHTGDRPHKCPHCDYKATQLGTLKSHLMSLHSNEKPLKCPHCDYKASQIRNLKRHLLALHSGEEAHKCPYCDYKAKQSACLKNHIMSLHTGDRPHKCPHCDYKANKAATLKTHVMAHHTGDRPHKCPHCDYKATQSAHLKRHIMSLHTNEKPLKCPHCDYKASQIRNLKRHIMTLHTVEKPHKCSHCDFKTKLIRNLKIHIITLHAGEKPHNCPYCDYKAKQSVHLKNHIMSLHTGERPHKCPHCDYKATQVASLKTHIMSLHTGERPHKCPHCDYKATQSGYLKKHIISHHTHEKPHKCPYCDYNATQIRHLKIHIMSIHTGDRPYKCSQCAYEATQTALLKKHIMAMHTGDRPHICPYCDYKATQSAHLKKHMSRHTVDRPHF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00764328;
90% Identity: iTF_00764328;
80% Identity: iTF_00764328;