Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_000696795.2
Location
NW:18265-43479[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.3 5.3e+03 -2.9 0.0 8 20 23 35 21 38 0.82
2 3 0.0011 0.8 9.4 0.0 2 40 294 335 293 341 0.83
3 3 5.8e-12 4.3e-09 35.8 0.1 2 45 382 430 381 431 0.89

Sequence Information

Coding Sequence
ATGCCAAAGttcttcaaatttattgtagtttttattttgattgaaactgtaCGTGCTTGGGATTCAGACGATCttgaaatttttgatttagtCGAAGAGATTGGTCAGAGTTTCTATGAAGCTCTAGAAGTTCCAGAGaaCGCTGATGCGTCAGTGATAAAGAAAGCATTTAGGAAACTCTCGCTTGCATTACATCCGGACAAAAATGCTGCTCCAGATGCTAACGTCAAATTCAGAcagCTCGTTGCGATACATGACGTCCTCAGAGACTCCACCAAAAGAGCCAAATATGACGATGTCCTCCTCAATGGTCTTCCCGACTGGAAAGAGGCTGTGTATTATTATAGGAAGGTTCGAAAGATGGGTTTGATGGAAATGTCCATCATACTCTTTATTATCATCACTATTGGCCAATACTTAGTTGCTTGGGCTGCTTACTTCGAGAAGAAATATGCTATTGAGGAATTTGTGAATCTCAAAAGTAAGAAATTACAGAAAAAGCAGAAGAAGGGTAAAGCAGTGGATATGGAAACTGCTCAAATACTTCCAGAATTAGTATCTACGCTGCCAAAGCCAACGGTTTCTTGTACCTTACCAGTTCAGATTTGCAAGTTGTGCTATTTTCTTGTCAAGGATTTCCCAGTACTTTTTTACCGTTGGGTACAAAGAGTCATCGAAGAGAGGAGAACTGCGAAGGAACAGGATGTGGAGGAAGAGTCTTCCGAAGAAGAAGTTATGCCTGTGAGGGAGAGGGGGCCAAGGCGAAGAAAAGGCTTCACTGCTCCAGAAATTAAGGACAGCGAGAAAAAACCTACGCAAGATGCAAATGTCAAAACTGAAACTAATAAGACGCAAGAGTCAGTAAAAATTATCAGCGGTGGATTGTGGACAGATGACGATTTCGCTGACCTCATAAggcttatgaaaaaatatcccCCAGGCACTCAGGAAagATGGGAAAAAATTGGACAGACGATGAGAAGGCCTACACACGAGGTGGCGCACATGGCCCATAAAATGAAGGATGATGGCTTCAAGCCTATCGCAAAACAGGAAGAAGAGACCAAAGATATTGTAGCAGACGAGCCAAAGAAGACCAAGACGAAGGGTGGTAAGACAGGAAACATTGAGGAGATACCGGAAACTCCATGGAGTCAGTCACAGCAGAAGGCTTTCGAGCAAGCTTTGGCTTCCTATCCGAAGGGAACAGTTGGTGATCGATgggaaaaaatttctaaatgtgTACCGGGAAAGACTAAGgaGGAGTGTATGCTGAGGTATAAGAACATAgtagacataataaaaaagaagaaagagaaaccagataataatgataataaactgTCTGAGAGTTAG
Protein Sequence
MPKFFKFIVVFILIETVRAWDSDDLEIFDLVEEIGQSFYEALEVPENADASVIKKAFRKLSLALHPDKNAAPDANVKFRQLVAIHDVLRDSTKRAKYDDVLLNGLPDWKEAVYYYRKVRKMGLMEMSIILFIIITIGQYLVAWAAYFEKKYAIEEFVNLKSKKLQKKQKKGKAVDMETAQILPELVSTLPKPTVSCTLPVQICKLCYFLVKDFPVLFYRWVQRVIEERRTAKEQDVEEESSEEEVMPVRERGPRRRKGFTAPEIKDSEKKPTQDANVKTETNKTQESVKIISGGLWTDDDFADLIRLMKKYPPGTQERWEKIGQTMRRPTHEVAHMAHKMKDDGFKPIAKQEEETKDIVADEPKKTKTKGGKTGNIEEIPETPWSQSQQKAFEQALASYPKGTVGDRWEKISKCVPGKTKEECMLRYKNIVDIIKKKKEKPDNNDNKLSES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00715069;
90% Identity
iTF_00715069;
80% Identity
-