Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_003667255.1
Location
RCWM01000508.1:385750-405699[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.4 2.3e+04 -1.7 0.0 8 25 23 40 21 43 0.79
2 3 0.00029 2.9 10.8 0.0 2 40 292 333 291 339 0.84
3 3 1.7e-11 1.7e-07 34.0 0.1 2 44 379 426 378 427 0.89

Sequence Information

Coding Sequence
ATGCCAAAGTTCTTCATATTCAttgtaggttttatttttattgaaactatATGTGCTTGGGATTCAGACGATCTTGAAATTTTCGATTTAGTTGAAGAGGTTGGGCAGAGTTTCTATGAAGTTCTTGAAATTCCAGAGAATGCTGATGGATTAGTGATTAAGAAAGCATTTAGGAAGCTCTCGCTAGCCTTACATCCAGACAAAAATGATGCACCAGATGCTAATGTCAAGTTTAGACAGCTCGTTTCAATTTATGACATCCTTCGGGACTCTACCAAAAGAGCCAAATACGATGATGTCCTCCTCAATGGTCTTCCCGACTGGAAAGAGGCTGTGTATTATTATAGGAAGGTTCGAAAGATGGGCTTGATAGAAATGTCCATCATACTGTTCATCATTATTACTATAGGTCAATACTTAGTTGCCTGGGCAGCCTACTTTGAAAAGAAATATGCGATTgaAGAATTCGTAAATCTCAAAAGTAAGAAGTTACAAAAGAAACAGAAGAAGGGTAAAGCAGTGGATCTGGAAACTGTTCAGATACTTCCAGAATTAGTCTCAACACTGCCTAAGCCGACGGTTTCTTGTACCTTACCAGTTCAGATTTGCAAGTTATGCTGGTTCCTTGTCATGGATTTCCCCCCGCTTACTTACCGCTGGGTACTAAGAGTCATTGAAGAGAGGAGAAACGCTAAGGAACAGGATGTGGAAGAGGAGTCTTCTGAAGAAGAAGTTATCCCTGTGAGGGAGAGGGGGCCGAGGAGAAGAAAAGGTTTCACTGCACCTGAGATTAAGGATGATAAAAAACCTACGCAAGATGCTAACGTCAAGGCCGAGGCGAAGGCGCAGGAGTCTGCTAAAATTGTCTGTGGCGGCCTGTGGACAGATGACGATTTCGCTGATCTTATTAGGCTCATGAAGAAATACCCTCAGGGCACTCAGGAAAGGTGGGAAAAAATTGGACAGGCGATGAGGAGGCCAACTCATGAGGTCGCTCATATGGCCCACAAGATGAAGGATGACGGTTTTAAGCCTATTGCAAAACAGGAAGAAGATAACAAAGATATTGGAGATGAACCAAAGAAGACCAAGACAAAGGGAGGCAAGACAGGGAACATAGAAGAGATACCGGATAATCCGTGGAGCCAGGCACAGCAGAAGGCCTTCGAGCAAGCTTTGGCATCTTATCCTAAGGGAACAGTCGGCGATCGATGGGAAAAAATTTCTAAGTGCGTACCGGGGAAGAGCAaggaGGAGTGTATGCTGAGGTATAAGAACATTAGTTAA
Protein Sequence
MPKFFIFIVGFIFIETICAWDSDDLEIFDLVEEVGQSFYEVLEIPENADGLVIKKAFRKLSLALHPDKNDAPDANVKFRQLVSIYDILRDSTKRAKYDDVLLNGLPDWKEAVYYYRKVRKMGLIEMSIILFIIITIGQYLVAWAAYFEKKYAIEEFVNLKSKKLQKKQKKGKAVDLETVQILPELVSTLPKPTVSCTLPVQICKLCWFLVMDFPPLTYRWVLRVIEERRNAKEQDVEEESSEEEVIPVRERGPRRRKGFTAPEIKDDKKPTQDANVKAEAKAQESAKIVCGGLWTDDDFADLIRLMKKYPQGTQERWEKIGQAMRRPTHEVAHMAHKMKDDGFKPIAKQEEDNKDIGDEPKKTKTKGGKTGNIEEIPDNPWSQAQQKAFEQALASYPKGTVGDRWEKISKCVPGKSKEECMLRYKNIS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00763799; iTF_01298307;
80% Identity
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