Hrub005860.1
Basic Information
- Insect
- Halictus rubicundus
- Gene Symbol
- MYT1L_1
- Assembly
- GCA_028454235.1
- Location
- CM052170.1:12677137-12680546[-]
Transcription Factor Domain
- TF Family
- zf-C2HC
- Domain
- zf-C2HC domain
- PFAM
- PF01530
- TF Group
- Zinc-Coordinating Group
- Description
- This is a DNA binding zinc finger domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.045 1.6e+02 2.4 0.0 23 29 15 21 13 21 0.87 2 5 2.4e-18 8.3e-15 54.5 6.9 1 29 34 62 34 62 0.98 3 5 2.6e-16 9.1e-13 48.0 7.7 1 28 79 106 79 107 0.96 4 5 9.7e-20 3.4e-16 58.9 5.0 1 29 140 168 140 168 0.97 5 5 0.092 3.2e+02 1.4 0.0 1 11 206 216 206 219 0.79
Sequence Information
- Coding Sequence
- ATGAAACAATTGGCAATTGACGAGTTTCACTGGGGTCAGGTCCTGTCCGGTTGCCCGCGGGCCGATCGTTCGCAGATCCAGGCACATTCCCAGGAGCTGAAGTGCCCTACGCCAAACTGCGACGGATCTGGCCACGTGACTGGCAACTATTCCTCCCACAGAAGTTTATCCGGATGTCCTCGTGCCAATAAACCGAAGAGCAAGCCGCGGGATGGACAGGACTCTGaacctctaagATGTCCAATCCCCGGTTGCGACGGGTCTGGCCATGCTACTGGCAAATTCTTGTCCCATCGCAGCGCGTCCGGCTGCCCTCACGCGAACAGGAATAAACCACGACTGTTGGAGTCAGGGGGCACCGTGGAGCAGCACAAAGCAGCAGTAGCTGCAGCAACGGCGATGAAGTTCGAGGGTGTAAATTGTCCGACACCGGGCTGCGACGGAATGGGGCACATAAACGGATCGTTTGCGACCCACAGGTCCGCTTCTGGTTGTCCCCTGGCCGGTTACGGAGCGAAGAAGCCGAAGTACGAAGACATGTCGGCCATGTTCAGCAAAGGAATCCCCGGTGAGGATCAAGCTGCTTCTGACGTGATGATCGATGTGACCGATTATCAATGCCCGACCGCTGATGATCGAGGAATGGGAGTGATAAAGTTGACGGGCCGGCTCTGCGTGAAGCGAGTCGTCGATGAGAATTATGTTGTTGTCCGATTATCGAGCTCCTGCACGCGGATCGAGGACGCGGTTCACGCCGAGTGA
- Protein Sequence
- MKQLAIDEFHWGQVLSGCPRADRSQIQAHSQELKCPTPNCDGSGHVTGNYSSHRSLSGCPRANKPKSKPRDGQDSEPLRCPIPGCDGSGHATGKFLSHRSASGCPHANRNKPRLLESGGTVEQHKAAVAAATAMKFEGVNCPTPGCDGMGHINGSFATHRSASGCPLAGYGAKKPKYEDMSAMFSKGIPGEDQAASDVMIDVTDYQCPTADDRGMGVIKLTGRLCVKRVVDENYVVVRLSSSCTRIEDAVHAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00024933;
- 90% Identity
- iTF_00024933;
- 80% Identity
- -