Avir003051.1
Basic Information
- Insect
- Agapostemon virescens
- Gene Symbol
- MYT1L
- Assembly
- GCA_028453745.1
- Location
- CM052090.1:4789555-4793028[+]
Transcription Factor Domain
- TF Family
- zf-C2HC
- Domain
- zf-C2HC domain
- PFAM
- PF01530
- TF Group
- Zinc-Coordinating Group
- Description
- This is a DNA binding zinc finger domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.054 2.7e+02 2.4 0.0 23 29 15 21 13 21 0.87 2 5 2.3e-19 1.2e-15 58.0 8.3 1 29 34 62 34 62 0.98 3 5 1.3e-17 6.3e-14 52.4 5.2 1 29 79 107 79 107 0.97 4 5 1.9e-19 9.7e-16 58.2 5.6 1 29 140 168 140 168 0.97 5 5 0.14 7.2e+02 1.1 0.1 1 11 206 216 206 219 0.79
Sequence Information
- Coding Sequence
- ATGAAACAATTGGCAATTGACGAGTTTCACTGGGGTCAGGTCTTGTCCGGTTGTCCGCGGGCTGATCGTTCGCAGATCCAGGCGCATTCCCAGGAACTGAAGTGCCCGACGCCGGGTTGCGACGGATCAGGACACGTCACCGGGAACTACTCCTCCCACAGGAGTTTATCCGGATGTCCTCGGGCCAATAAACCGAAGAGCAAGCCGCGGGATGGACAGGACTCTGAACCTTTGAGATGTCCAATCCCCGGTTGCGACGGGTCTGGCCATGCTACTGGCAAATTCTTGTCCCATCGCAGCGCGTCCGGCTGCCCGATCGCGAACAGGAATAAGTCGCGACTGTTGGAGTCAGGGGGCACCGTGGAGCAGCACAAAGCGGCAGTAGCTGCGGCGACGGCGATGAAGTTCGAGGGTGTCAATTGTCCGACACCTGGCTGCGACGGGATGGGGCACGTAAACGGCTCGTTCTCGACCCACAGGTCCCTCTCTGGTTGTCCCCTGGCCGGTTACGGGGCGAAGAAGCCGAAGTTCGAAGACATGTCGAGCATGTACAGCAAAGGAATCCCCGGTGAGGATCAAGCTGCTTCTGACGCGATGATCGATGTCTCCGATCATCGATGCCCGACCGCTGATGATCGAGGAACGGGAGTGATTACGTTGACGGGCCGACTCTGCGTGAAGCGAGTCGTCGATGCGAACCGCGTTGTTGTACGATCGTCGAGCTCGTGCACGCGAATCGAGGACTCCATTCACGCCGAGTGA
- Protein Sequence
- MKQLAIDEFHWGQVLSGCPRADRSQIQAHSQELKCPTPGCDGSGHVTGNYSSHRSLSGCPRANKPKSKPRDGQDSEPLRCPIPGCDGSGHATGKFLSHRSASGCPIANRNKSRLLESGGTVEQHKAAVAAATAMKFEGVNCPTPGCDGMGHVNGSFSTHRSLSGCPLAGYGAKKPKFEDMSSMYSKGIPGEDQAASDAMIDVSDHRCPTADDRGTGVITLTGRLCVKRVVDANRVVVRSSSSCTRIEDSIHAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00864297; iTF_00862220; iTF_00862934; iTF_00763549;
- 90% Identity
- iTF_00862220; iTF_00763549; iTF_00862934; iTF_00866362; iTF_00865665; iTF_00863617; iTF_00864297; iTF_00860778; iTF_00860779; iTF_00864982; iTF_00867044;
- 80% Identity
- -