Hrub013703.1
Basic Information
- Insect
- Halictus rubicundus
- Gene Symbol
- dsx
- Assembly
- GCA_028454235.1
- Location
- CM052174.1:13691723-13697670[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-24 7.8e-21 73.6 14.0 2 47 29 74 28 74 0.98 2 2 1.3 4.4e+03 -2.4 0.1 20 26 164 170 162 172 0.77
Sequence Information
- Coding Sequence
- ATGGATAACAGTGACGAGGTCCTTTCTACGCGGACGGAAACGAACGCATCCTCGTCGTCGACGACAGCCTCGAGTCCACGGACACCGCCTAGTTGCGCGCGATGCCGCAATCACCGATTTCAAATCCTCCTTAAGGGCCACAAGAGGTACTGCAAGTACCGCAACTGCACGTGCCATAAGTGCAAGCTGACCGCGGAGAGACAACGGGTGATGGCGAAGCAGACCATGCTGAGAAGAAACCTGGCGCAGGACGAGAAAAAGATCAGGGCTGCCGATGAGGTGGATCCGCCGCCGTTCGAGATAGAGGCTGATCGACTTTCCGTTCTTCAGCCGGCCAGGAGCTTGGAAGGCAGCTACGACAATAGCAGCGGCGATTCCCCGATCAGCAATCATGGCGGAAACGGTCTGCACACTGGCCTAGGCGGTGCCATCACGATCCCAACCTCGAGGAAAGTGACATCGTCGCATCCGCACACTGGAGCACCCAGCCATTTACAGCAGTGCCAGTTCGGTAAGCGACAATTGCATTTTTCCCCTTTGTTCTTCCTTCGACATTCGCGCTACGACTAA
- Protein Sequence
- MDNSDEVLSTRTETNASSSSTTASSPRTPPSCARCRNHRFQILLKGHKRYCKYRNCTCHKCKLTAERQRVMAKQTMLRRNLAQDEKKIRAADEVDPPPFEIEADRLSVLQPARSLEGSYDNSSGDSPISNHGGNGLHTGLGGAITIPTSRKVTSSHPHTGAPSHLQQCQFGKRQLHFSPLFFLRHSRYD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00762577;
- 90% Identity
- iTF_00762577;
- 80% Identity
- -