Basic Information

Insect: Halictus rubicundus
Gene Symbol: SNAPC4
Assembly: GCA_028454235.1
Location: CM052179.1:309750-312485[+]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 2 1.9e+03 -1.0 0.0 3 18 165 180 164 181 0.92

2 6 0.23 2.2e+02 2.0 0.0 6 43 217 256 214 259 0.71

3 6 5.8e-11 5.6e-08 32.7 0.5 1 45 265 311 265 312 0.96

4 6 7.4e-08 7.1e-05 22.8 0.5 4 43 322 365 321 368 0.96

5 6 4.8e-14 4.6e-11 42.6 0.0 1 45 374 419 374 420 0.97

6 6 9.9e-10 9.6e-07 28.8 0.2 3 40 429 466 428 468 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	2	1.9e+03	-1.0	0.0	3	18	165	180	164	181	0.92
2	6	0.23	2.2e+02	2.0	0.0	6	43	217	256	214	259	0.71
3	6	5.8e-11	5.6e-08	32.7	0.5	1	45	265	311	265	312	0.96
4	6	7.4e-08	7.1e-05	22.8	0.5	4	43	322	365	321	368	0.96
5	6	4.8e-14	4.6e-11	42.6	0.0	1	45	374	419	374	420	0.97
6	6	9.9e-10	9.6e-07	28.8	0.2	3	40	429	466	428	468	0.86

Sequence Information

Coding Sequence: ATGGATGAGCTAATGGACAACGATGATTTGGAGAAACTCCTATTGTTAGAAAACGTGTCTGCCAGAGGAAAAAGCCAGCACGATTTTCCATGTATTTCTTCGTTGGAAAAATCAGTAATGGTTGGTAAGTCGCAAGTGTTTTCAAAAGATTCTACGTTCCGAAAGAAATCAGAATATCAAAACGAAAATATGCGTTCGGAATGTAATATCAACGACTGCAACAATTTATTGAGTTTCAACAAGCAGATCATATCTTTTTTGCTCGATTTAAAAAACCACATAACCTATGCTCTTGAAAAATGTGAAACGAAGTTGACAGTAATAGAGTCGAGCCTTGAAAAACATGTAACCGGAGATACAAGAGCTTTAATTTGCAATGCCGGTATGCCATATTTTAAGGATAGGTATCATTTTTTTGCTCCTAAAAACGACGACGAAATATTGAAAGAAAATTGTAAAGAATTACATTTGAGGAATCTTCCTAAAGTAGCTCCTTGGACGATCAAAGAAAGGAATATGTTATTTAATGCAATACAGGAAGAAATTGTCGTAGCTTCTAACAAGATTAAGAGTATCGGACTTGACGAGTCGAAGCACGAGCCTCCGTGGAAACTCGAAGAAAATATGAAAGCCGGAAAGACATTAACGGCCGATGAATATGACAAACTGGTTGACCAGCTACAAGGAAAAGATTTGGATTGGTTCAAGATATCGTCTGAACATTTCGAGGATGTACACTCACCGCTCGATTGTCGAGTCATGTGGAACGTTTTCCTTCATCCTCGGATTAATAAAAACTCCTGGACAAAGTTGGAAGATGTCAAATTAAAAGAAATTACAAAGAGGTACAAATTTCAGAACTGGGACAGAATCGCGGCACAGTTAAATACAAATCGTTCCGCTTACCAGTGTTTCATCAGATATAATACAATAAGGAAATTGCCGAAAGTTAGAAATTTCATATGGAAGCACAGAGAGGACGATAAACTTTTAAAATTAGTAAAAATTTTTCAGATCGGTGACTTCATTCCTTGGGGCGAAGTAGCCAGTTGGATGCAGAATAGAACCAAACAACAAGTGTATTTTCGATGGACTTATAGTTTAGCGCCGTATCTAACTAAAGGCAGATTTAGCAAATCCGAGGATAATATTTTAAGAGATGCAGTCGCTAAATACGGTACAAATTTTCGTAAAATCTCAGCCGCACTAATGCCCAACAGGTCAACGGTCCAACTGCACGACCGCTATCAAACACTGGTTAACAGTCAAATGAAAAATTGGAATGTATGGTCGCTAGAAGAAGATTCGAAACTGTTGGAACTTTTCGAACGTTTCGGTCCAAATTGGTCCAGAATTGCTAAAACGTTTACCTGTAAAACAAGAACAAAGTTAAGACACCGGCATGCCGCTTTGCAAAAGTATATTAATAAAGGTGTATCCATTCATGATTTGCACAGAGATTACTTTAAAGATAAGAACGAAATAAACCAGGAGAAGAGAAACAAAGAATCCGATCGATCGGATCGAATACATTACTTTAATAGAGGCGTGTCGAAGAAGGACCATAAAGACTGTAACGACGATATTGATAAGGAATTGATCAAGTATTTCCATACAGAACAAACGATAGAAAAATCGCTTGATCATAGACAACGGTCTTATACGTCAGATGAACTTGAGCGCGATGTGAACAAATTGTATAATATTTTGCGGCAATTAAATGCTCAACTTTCTATTCCTGATGATGTATTTAATAATTCAATGTTACACGACAGGCACAGACAGCTTCTATGTTCGTTAAAGGAATATACAGATGTGAAAAACAACAAGAACAAACAACGTATGGTAATAGATGAGTATAGTTCGCTTATGTTTGGTGTAAATCACAGCAACTTTGTGGAAAGAGCTTCTGGCGATAAATCATCGTGCTATTTTCAATCGAAGATGAAATTCGAATGTCCAAATAAAACAAGATGCATAGACTATCCTGTAAACACAAAGAGTATCTTTTTAGTCGAGGAAACGAGAGTCTTTCACACTCCAGACGTTGTGGTTTCTCATATCGGCGGCAAAGAGCAGGAATTAGAATTTGAGAAGCTCGCTCGTTTGCTTGTGCAGAGTAGTAGTTCAAAAGATAAACAGTTCGTGCGAACGATTAAAGATAAAGGCTTTTACGCATTTCCGTCTGGGATGTCTTTGAATCAAAACTACTTGGCTACCAACAGCAGGGACAACGGCAATAGAAGCAGCTTGAATGTTCCTGGTCGTATAAATCGTGCAACGTCGTGTTCGCAACGCGAAAATACGATAAGAAATATTATGTTGTTTAACGCGTTCGAAACAACACACGAGTTTACATCTGCCACCTCCGTGGAAACACCGAGAGACCAATACATACCCCCGATCGAAACGACACACTCAACTTTATTCAGTTTTAAACGTTTACTCGGTTTGAAACCGAGTTTCACCGAAGAACATAATAATCCACAGAAATTTCACACAATATCGAAGAGTTGTCAACGATCGTTAAATTTATTGGAAACGCGTTTAGAACAATTATTTAAATACCCGATCGGTCTGTCGAGGACCACGTTACCCGAAGTTTATGTTATGGATACTTTTTCGTACGACGACGTTAAATCGAAAAGAAAAGCTTCCGAACCACCGACGATACCAAAACCATGTAAAACAAGAAAGCTTCAAATAATCGGTAAGAATAGAAAAGATGATAACTAG
Protein Sequence: MDELMDNDDLEKLLLLENVSARGKSQHDFPCISSLEKSVMVGKSQVFSKDSTFRKKSEYQNENMRSECNINDCNNLLSFNKQIISFLLDLKNHITYALEKCETKLTVIESSLEKHVTGDTRALICNAGMPYFKDRYHFFAPKNDDEILKENCKELHLRNLPKVAPWTIKERNMLFNAIQEEIVVASNKIKSIGLDESKHEPPWKLEENMKAGKTLTADEYDKLVDQLQGKDLDWFKISSEHFEDVHSPLDCRVMWNVFLHPRINKNSWTKLEDVKLKEITKRYKFQNWDRIAAQLNTNRSAYQCFIRYNTIRKLPKVRNFIWKHREDDKLLKLVKIFQIGDFIPWGEVASWMQNRTKQQVYFRWTYSLAPYLTKGRFSKSEDNILRDAVAKYGTNFRKISAALMPNRSTVQLHDRYQTLVNSQMKNWNVWSLEEDSKLLELFERFGPNWSRIAKTFTCKTRTKLRHRHAALQKYINKGVSIHDLHRDYFKDKNEINQEKRNKESDRSDRIHYFNRGVSKKDHKDCNDDIDKELIKYFHTEQTIEKSLDHRQRSYTSDELERDVNKLYNILRQLNAQLSIPDDVFNNSMLHDRHRQLLCSLKEYTDVKNNKNKQRMVIDEYSSLMFGVNHSNFVERASGDKSSCYFQSKMKFECPNKTRCIDYPVNTKSIFLVEETRVFHTPDVVVSHIGGKEQELEFEKLARLLVQSSSSKDKQFVRTIKDKGFYAFPSGMSLNQNYLATNSRDNGNRSSLNVPGRINRATSCSQRENTIRNIMLFNAFETTHEFTSATSVETPRDQYIPPIETTHSTLFSFKRLLGLKPSFTEEHNNPQKFHTISKSCQRSLNLLETRLEQLFKYPIGLSRTTLPEVYVMDTFSYDDVKSKRKASEPPTIPKPCKTRKLQIIGKNRKDDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00762479;
90% Identity: iTF_00762479;
80% Identity: -