Basic Information

Insect: Halictus quadricinctus
Gene Symbol: SNAPC4
Assembly: GCA_028454245.1
Location: CM052124.1:305739-308501[+]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 2.3 2.1e+03 -1.0 0.0 3 18 165 180 164 181 0.92

2 6 0.38 3.5e+02 1.5 0.0 15 43 223 256 216 259 0.75

3 6 8.5e-11 7.7e-08 32.4 0.5 1 45 265 311 265 312 0.96

4 6 1.6e-07 0.00014 21.9 0.3 4 43 322 365 321 368 0.96

5 6 5.7e-14 5.2e-11 42.6 0.0 1 45 374 419 374 420 0.97

6 6 1.2e-09 1.1e-06 28.8 0.2 3 40 429 466 428 468 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	2.3	2.1e+03	-1.0	0.0	3	18	165	180	164	181	0.92
2	6	0.38	3.5e+02	1.5	0.0	15	43	223	256	216	259	0.75
3	6	8.5e-11	7.7e-08	32.4	0.5	1	45	265	311	265	312	0.96
4	6	1.6e-07	0.00014	21.9	0.3	4	43	322	365	321	368	0.96
5	6	5.7e-14	5.2e-11	42.6	0.0	1	45	374	419	374	420	0.97
6	6	1.2e-09	1.1e-06	28.8	0.2	3	40	429	466	428	468	0.86

Sequence Information

Coding Sequence: ATGGATAAACCAATGGACAACGATGATTTGGAGAAACTCCTATTGTTAGAAAACGTGTCTGCCAGAGGAAAAAGCCAGCACGATTTTCCATGTATTCCTTCGTTGGAAAAATCAGTAATGGTTGGTAAGTCGCAAGTGTTTTCAAAAGATTCTACGTTCCGAAAGAAATCAGAATATCAAAACGAAAATATGCGTTCGGAATGTAATATCAACGACTGCAACAATTTATTGAGTTTCAACAAGCAGATCATATCTTTTTTGCTCGATTTAAAAAACCACATAACCTATGCTCTTGAAAAATGTGAAACGAAGTTGACAGTAATAGAGTCGAGCCTTGAAAAACATGTAACCGGAGATACAAGAGCTTTAATTTGCAATGCCGGTATGCCATATTTTAAGGATAGGTATCATTTTTTTGCTCCTAAAAACGACGACGAAATGTTGAAAGAAAATTGTAAAGAATTACATCTGAGGAATCTTCCTAAAGTAGCTCCTTGGACGATCAAAGAAAGGAATATGTTATTTAATGCAATACAGGAAGAAATTGTCGTAGCTTCTAACAAGATTAAGCGTATTGGACTTGACGAGTCGAAGCACGAGCCTCCGTGGAAACTCGAAGAAAATATGAAAGCCGGAAAGATATTAACAGCCGATGACTACGACAAACTGGTTGACCAGCTACAAGGAAAAGATTTGGATTGGTTCAAGATATCGTCTAAACATTTCGAGGATGTACACTCGCCGCTCGATTGTCGAGTCATGTGGAACGTTTTCCTTCATCCTCGGATTAATAAAAACTCCTGGACAAAGTTGGAAGATGTCAAATTAAAAGAAATTACAAAGAGGTACAAATTTCAGAACTGGGACAGAATCGCGGCAGAGTTAAATACAAATCGTTCCGCTTACCAGTGTTTCATCAGATATAATACAATAAGGAAATTGCAGAAAGTTAGAAATTTCATATGGAAGCACGGAGAGGACGATAAACTTTTAAAATTAGTAAAAATTTTTCAGATCGGTGACTTCATTCCTTGGGGCGAAGTAGCCAGTTGGATGCAGAATAGAACCAAACAACAAGTGTACTTTCGATGGACTTATAGTTTAGCGCCGTATCTAACTAAAGGCAGATTTAGCAAATCCGAGGATAATATTTTAAGAGATGCAGTCGCTAAATACGGTACAAATTTTCGTAAAATCTCAGCCGCACTAATGCCTAACAGGTCAACGGTTCAACTGCACGACCGCTATCAAACACTGGTTAACAGTCAAATGAAAAATTGGAATGTATGGTCGCTAGAAGAAGATTCGAAACTGTTGGAACTTTTCGAACGTTTCGGTCCAAATTGGTCCAGAATAGCTAAAACGTTTACCTGTAAAACAAGAACAAAGTTAAGACACCGGCATGCCGCTTTGCAAAAGTATATTAATAAAGGTGTATCCATTCATGATTTGCACACAGATTACTTTAAGGATAAAAACGAATCCGATCGATCGGATCGAATACGTTACTTTAATAGAGGCGTGTCGAAGAAGGACCATAAAGACTGTAACGACGATATTGATAAGGAATTGATCAAGTATTTCCATACAGAACAAACGATAGAAAAATTGCTTGATCATAGACAACGGTCTTATACGTCAGATGAACTTAAGCGCGATGTGAACAAATTGTATAATATTTTGCGGCAATTAAATGCTCAACTTTCTATTCCTGATGATGTATTTAACAAGTCAATGTTACACTACAGGCACAGACAGCTTCTATGTTCGTTAAAGGAATATACAGATGTGAAAAACAACAAGAACAAACAACATATGGTAATAGATGAGTATAGTTCGCTTATGTTTGGTGTAAATCACAGCAACATTGTGGAAAGAGCTTCTGACGATAAATCATCATGCTCTTTTCAATCGAAGATGAAATTCGAATTTCCAAATAAAACAAGATGCATAGACTATCCTGTAAACACAAAGAGTACCTTCTTAGTCGAGGAAACGAGAGTCTTTCACACTCCAGACGTTGTGGTTTCTTATATCGGCGGCAAAGAGCAGGAATTAGAATTTGAGAAGCTCGCTCGTTTGCTTGTGCAGAGTAGTAGTTCAAAAGATAAACAGTTCGTGCGAACCATTAAAGATAAAGGCTTTTACGCATTTCCGTCTGGGATGTCTCTGAATCAAAACTACTCGGCTACCAACAGCAGGGACAACGGCAATAGAAGCAGCTTGAACGTTCATTCAAAAGAATCAAAAAACGACGAAAACGTTTTGTTCGTTCGAACCAATGTTCCTGGTCGTATAAATCGTTCAACGTCGTGTTCGCAAAGCGAAAATACGATAAGAAATATTATGTTGTTTAACGCGTTCGAAACGACACACGAGTTTACATCTGCCACCTCCGTGGAAACACCGAGAGACCAATACGTACCCCCCATCGAAACGACACACTCAACTTTATTCAGTTTTAAACGTTTACTCGGTTTGAAACCGAGTTTCACCGAAGAACATAATAATCCACAGAAATTTCACACAATATCGAAGAGTTGTCAACGATCGTTAAATTTATTGGAAACGCGTTTAGAACAATTATTTAAATACCCGATCGGTCTGTCGAGGACCACGTTACCCGAAGTTTATGTTATGGATACTTTTTCGTACGACGACGTTAAATCGAAAAGAAAAGCTTCCGAACCACCGACGATATCAAAACCATGTAAAACAAGAAAGCTTCAAATAATCGGTAAGAATAGAAAAGATAATAACTAG
Protein Sequence: MDKPMDNDDLEKLLLLENVSARGKSQHDFPCIPSLEKSVMVGKSQVFSKDSTFRKKSEYQNENMRSECNINDCNNLLSFNKQIISFLLDLKNHITYALEKCETKLTVIESSLEKHVTGDTRALICNAGMPYFKDRYHFFAPKNDDEMLKENCKELHLRNLPKVAPWTIKERNMLFNAIQEEIVVASNKIKRIGLDESKHEPPWKLEENMKAGKILTADDYDKLVDQLQGKDLDWFKISSKHFEDVHSPLDCRVMWNVFLHPRINKNSWTKLEDVKLKEITKRYKFQNWDRIAAELNTNRSAYQCFIRYNTIRKLQKVRNFIWKHGEDDKLLKLVKIFQIGDFIPWGEVASWMQNRTKQQVYFRWTYSLAPYLTKGRFSKSEDNILRDAVAKYGTNFRKISAALMPNRSTVQLHDRYQTLVNSQMKNWNVWSLEEDSKLLELFERFGPNWSRIAKTFTCKTRTKLRHRHAALQKYINKGVSIHDLHTDYFKDKNESDRSDRIRYFNRGVSKKDHKDCNDDIDKELIKYFHTEQTIEKLLDHRQRSYTSDELKRDVNKLYNILRQLNAQLSIPDDVFNKSMLHYRHRQLLCSLKEYTDVKNNKNKQHMVIDEYSSLMFGVNHSNIVERASDDKSSCSFQSKMKFEFPNKTRCIDYPVNTKSTFLVEETRVFHTPDVVVSYIGGKEQELEFEKLARLLVQSSSSKDKQFVRTIKDKGFYAFPSGMSLNQNYSATNSRDNGNRSSLNVHSKESKNDENVLFVRTNVPGRINRSTSCSQSENTIRNIMLFNAFETTHEFTSATSVETPRDQYVPPIETTHSTLFSFKRLLGLKPSFTEEHNNPQKFHTISKSCQRSLNLLETRLEQLFKYPIGLSRTTLPEVYVMDTFSYDDVKSKRKASEPPTISKPCKTRKLQIIGKNRKDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00763159;
90% Identity: iTF_00763159;
80% Identity: -