Hpyr023289.1
Basic Information
- Insect
- Habrosyne pyritoides
- Gene Symbol
- -
- Assembly
- GCA_907165245.1
- Location
- OU015610.1:8325897-8329147[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.031 2.3 9.3 2.1 1 23 279 302 279 302 0.95 2 18 9.6e-07 7.1e-05 23.5 2.2 1 23 307 329 307 329 0.99 3 18 0.0011 0.079 13.9 0.5 3 23 361 382 359 382 0.96 4 18 0.00096 0.071 14.0 0.3 2 23 443 465 442 465 0.96 5 18 6.7e-05 0.0049 17.7 1.3 1 23 471 494 471 494 0.93 6 18 0.31 23 6.1 0.5 2 21 499 518 498 519 0.93 7 18 0.59 44 5.2 0.1 3 23 529 550 527 550 0.91 8 18 0.0099 0.73 10.8 1.1 1 23 555 578 555 578 0.95 9 18 0.0075 0.55 11.2 0.1 2 23 591 612 590 612 0.95 10 18 0.0067 0.5 11.4 2.2 1 23 618 640 618 640 0.98 11 18 3.2 2.4e+02 2.9 0.1 2 10 646 654 645 658 0.86 12 18 0.00014 0.01 16.7 0.6 1 23 677 699 677 699 0.97 13 18 2.4 1.8e+02 3.3 1.0 3 23 705 725 704 725 0.91 14 18 0.029 2.1 9.4 2.2 2 23 740 762 739 762 0.96 15 18 0.0035 0.26 12.3 3.7 1 23 768 790 768 790 0.98 16 18 0.0019 0.14 13.1 6.0 2 23 797 818 796 818 0.96 17 18 0.001 0.075 13.9 1.3 1 23 824 847 824 847 0.96 18 18 8.1 6e+02 1.7 2.9 3 23 854 875 852 875 0.94
Sequence Information
- Coding Sequence
- ATGAGTATCAAAGACGATACAGAACATGAAGAAATCTACGCTATTCACGTTACAAACGAGGAGAACAATATAGAATGGCTGAAACAGAGGCTCAACAAAGTGTGGAGCTGTCCAAAGTTCTGCGGGGTTTGTTTAGAAGATAGCGGTAACCTCTATTCCCTTGAAATGGAGTTCATTTTCGGACGACAGACGACAGCCAAATCATTGCAATACCTCGTTAATTATCTATTTAATGGTGATTTCGAAGACGTCATGTCGAGCTCACACATCTGCGAGCAGTGCGCAGAAAGAACAATACAATCATACCAATTCATACACAGCACAAAACAAACCGCAAAAGTTATTAACAACTGTGTTAACGACGTACTATCAAAAGTTATAGATATTGATGACAAATTACAGGAGTCCACAAGTTATGAAAACGCCAATGTGATGATAGTTCTTGAAACTGATTCGGAAATAAACGAGTATATCGACGATATTACAACATATATCACTGAAATCATACCAAAAGAAAAGAATAATATAACGAAAACTATAGAAATTCCCAAAGATATACTAAAGGTTTTCGAACAAGATAAACGTCCTGAAGTTAATGTAACAAAATCGTCCTTAGAAACTCAAGCTACACCACCACAAAGGGAACCTAAATCATCACAAGAAACGGTTAGTGGGGAATTTAAAAAACCGAAACCAATAATACGACAAATACCAGTAAATAAAAAACCAGCCAAAGATCACGGCACGCCCAACATTACCCTGAAGGAGGGGAAGATAATTATAAAGCCTTTAACTTCATTGAACGGCCCAAACTTGACTCCAATATTTAACACGTACAGATGTACGCGATGTCCTGATATATTCACAACATATAAATCACTGAAGGATCATGAAAAACAAAAACATATGACGTTTGTGTACAGATGTAATATTTGCAATAAATCATATAATACTCAACAATACTTAAATGTACATCTAAAGACGCACGACAAAGCCAGGTGCAAGATTTGCCGAATAATTTTACCCGAAGGAGATTTCCTCCAACATTTGAGAAATAAACACGAAAAGGTTGTTCAAATATGCAAATTCTGCGATCAAGTTTATTATTCTCCAGAATCATTGGAGACACATTTCAAAACGACACACTTGGTAAACGATATTAGGTCGCAGTCGCAATGCATCATGTGTCTCAGGAATTTTAACGAAGATGAAATAAACAAACATAGATGCAAATTCTTCTGTCCAGAATGTACCGTAATGCCTTGCATACATCACAGCTTCCTAATGTCTTATAGGGAACAAATTCTAAACCATGTGTCTAAAGTGAAATGCGTGGAATGTGATTATAGCACTCGCAGAAAGGAATATTTGATCAGTCATGCTAATCGAGAGCATTTAGGTCATCATCCATTCACCTGTGACGATTGTGGTCAGCAGTTCTACACAAAAATGAGTTTAAAAACTCACATAGTGCAATTCCATCAAGATCTATGTATTTGCGAGTATTGTGATAGTGTACTTAAAGATAAAAACAAGTTAGACGCTCATAGGAAAGCTTGCAAAGTGGTTATAAGGTCTTACGGTTGCGATACGTGTGTAGCTTCATTTGATACTGAACAAGAATACGAGAAGCATGTAGATTTGAGACATAATGACGGGGTATATCCTTGCAAATTATGCAAAAGGGAATTTACGACGCTCATAAAGCTCGATGAGCATCATGCTAGAGTGCACAGTGGTATACAATGCAAGAAGAGGCGAAAGTTCATCGAGTGCACATTATGTGATACAAGATTTAATGATATAAGAGAATTGGTTCAACATGAACAACTACACGGCCCAAATGTGAAGTATCCCTGTAAAGTTTGCACGAAAGAATACAATAGTTTGAAGAAGCTTTATTTGCATAAGCAGAGGCATTACACCGAGAGATTGCGGTGTCCTACATGTAATAAAACAGTTACAGCAAATTTCTACCCTCAACACGCAATCCGCTGCGCTTACAAATCCACATCAACGTCTAAAAGTCATATTTGTGAAACATGTGGCAAAATTTTCCAAGCTGAATCGATGCTGAAGATTCACCAGAGAATACACTTGAAACCGGAGCCTTGCACGTTATGTAATAAGTTGGTTAAACCGACATATTTCAAAAAGCATATGGATCAATTTCATAGTGACACGAAACCGCCGACGGCTACCAAGATAAAGGGTATATATTGTGATCTCTGTGGTCATGCGATGAGGAAGAAGTGCGATTTAGAAGCTCACATGAACAGATATCATCTGAAAATCAAACCCTTCGTCTGTCATATCTGCAGTAAAGATTTTTGTGGAAAAATGAGACTTAAAGAGCACTTAGCGACCCACACGAGCGACAATAGTTGTTTCTGTTCAGTTTGCGGGAAGAAGTTCGCTAATCGCGTATGCTTGAAGATGCATTTTCGTATGCACACTGGCGAGAATCCGTATTCCTGTGACATATGTGGAGAGAAATTCAGATCCTCGAGCATAATGAAGACGCATCGTTTGAAAAAGCATCTTGAAAAGACTGTCTGCTGTCCACTTTGCGACAGTATGTTTTATATTGTTAGGGATATGAGACACCACTTCAAGAAAGTTCATTGGAAGTTTAAAGATAGGCCTTTTAATCCCACAGAAGTTAAGGAGTTAGATGAGAAGTATTACCACTTGTTTGAGGATGGTAGATTGCCTAGGTTAGATGCAGATTCATAA
- Protein Sequence
- MSIKDDTEHEEIYAIHVTNEENNIEWLKQRLNKVWSCPKFCGVCLEDSGNLYSLEMEFIFGRQTTAKSLQYLVNYLFNGDFEDVMSSSHICEQCAERTIQSYQFIHSTKQTAKVINNCVNDVLSKVIDIDDKLQESTSYENANVMIVLETDSEINEYIDDITTYITEIIPKEKNNITKTIEIPKDILKVFEQDKRPEVNVTKSSLETQATPPQREPKSSQETVSGEFKKPKPIIRQIPVNKKPAKDHGTPNITLKEGKIIIKPLTSLNGPNLTPIFNTYRCTRCPDIFTTYKSLKDHEKQKHMTFVYRCNICNKSYNTQQYLNVHLKTHDKARCKICRIILPEGDFLQHLRNKHEKVVQICKFCDQVYYSPESLETHFKTTHLVNDIRSQSQCIMCLRNFNEDEINKHRCKFFCPECTVMPCIHHSFLMSYREQILNHVSKVKCVECDYSTRRKEYLISHANREHLGHHPFTCDDCGQQFYTKMSLKTHIVQFHQDLCICEYCDSVLKDKNKLDAHRKACKVVIRSYGCDTCVASFDTEQEYEKHVDLRHNDGVYPCKLCKREFTTLIKLDEHHARVHSGIQCKKRRKFIECTLCDTRFNDIRELVQHEQLHGPNVKYPCKVCTKEYNSLKKLYLHKQRHYTERLRCPTCNKTVTANFYPQHAIRCAYKSTSTSKSHICETCGKIFQAESMLKIHQRIHLKPEPCTLCNKLVKPTYFKKHMDQFHSDTKPPTATKIKGIYCDLCGHAMRKKCDLEAHMNRYHLKIKPFVCHICSKDFCGKMRLKEHLATHTSDNSCFCSVCGKKFANRVCLKMHFRMHTGENPYSCDICGEKFRSSSIMKTHRLKKHLEKTVCCPLCDSMFYIVRDMRHHFKKVHWKFKDRPFNPTEVKELDEKYYHLFEDGRLPRLDADS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01417127;
- 90% Identity
- -
- 80% Identity
- -