Basic Information

Insect: Habropoda laboriosa
Gene Symbol: -
Assembly: GCA_001263275.1
Location: NW:897011-900397[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00033 0.019 14.6 1.2 1 23 97 120 97 120 0.94

2 13 0.0073 0.42 10.3 4.6 2 23 248 270 248 270 0.91

3 13 0.0033 0.19 11.4 2.2 3 23 315 336 314 336 0.96

4 13 4.1 2.3e+02 1.7 7.6 3 23 422 443 421 443 0.95

5 13 0.53 30 4.5 1.2 1 23 494 517 494 517 0.93

6 13 0.00047 0.027 14.1 0.1 2 23 565 587 564 587 0.96

7 13 0.00021 0.012 15.2 0.1 3 23 611 632 610 632 0.91

8 13 0.0054 0.3 10.8 3.6 2 23 674 696 673 696 0.96

9 13 0.073 4.1 7.2 4.2 3 23 711 732 709 732 0.92

10 13 0.00018 0.01 15.4 0.1 2 23 777 799 777 799 0.94

11 13 0.034 1.9 8.3 1.6 1 23 878 900 878 900 0.98

12 13 0.027 1.5 8.6 0.8 1 23 913 936 913 936 0.92

13 13 0.0048 0.27 10.9 0.8 1 23 1010 1033 1010 1033 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00033	0.019	14.6	1.2	1	23	97	120	97	120	0.94
2	13	0.0073	0.42	10.3	4.6	2	23	248	270	248	270	0.91
3	13	0.0033	0.19	11.4	2.2	3	23	315	336	314	336	0.96
4	13	4.1	2.3e+02	1.7	7.6	3	23	422	443	421	443	0.95
5	13	0.53	30	4.5	1.2	1	23	494	517	494	517	0.93
6	13	0.00047	0.027	14.1	0.1	2	23	565	587	564	587	0.96
7	13	0.00021	0.012	15.2	0.1	3	23	611	632	610	632	0.91
8	13	0.0054	0.3	10.8	3.6	2	23	674	696	673	696	0.96
9	13	0.073	4.1	7.2	4.2	3	23	711	732	709	732	0.92
10	13	0.00018	0.01	15.4	0.1	2	23	777	799	777	799	0.94
11	13	0.034	1.9	8.3	1.6	1	23	878	900	878	900	0.98
12	13	0.027	1.5	8.6	0.8	1	23	913	936	913	936	0.92
13	13	0.0048	0.27	10.9	0.8	1	23	1010	1033	1010	1033	0.98

Sequence Information

Coding Sequence: ATGGCGCACGAGACGACTGTACCGGAGCTGACGGAATTGGACAGCGACGGATCGAGTTGCGGCGAACGCGACGCGAGGAAACGTCTCCGTTTCGACACGGACTCGCAAGGGCCGAAAAAGAGACGGAAACAAACGACCCCTGTTAGATTCTCCTCGACGTTGATGACCGGTGTACACGAGGAGTCGAACGAGgaggacgacgaggacgaggacaGCGAAGGTAAGCTGTCGTCGCAGTCACCTATACCGAGTCAATCGTCGATAAGGGACGAGAACCTGAATAACGAATTCCGTTGCCAGTATTGTAGTCAGTTTTTCGATAGCAAGGAAACGTTGAACGTACACCTCGATAACGAACACGGTACCGCGAATCAAACGTCGCAACAGTGTCACAATAGTAGGCCATCGAGCGCCGCGATCAAGCAGGAACCGTCACAGCAACTGGACCAATCCGAGAATCCCGTGAATCTGCTTAGCGTAAAGAATTTCGCGATCAACTGGTTAGCCACCGGGCAACACGTGCAATCGCACGCGCAGATGCAGACGCAGAACGAGGAATCCTGGCCCGGGCCAGCGTCTAGCCAAATTCCCACCTTACCCAATCACCTACAGGTCCTCTCCGGTTTTCCTGGCGCTTTGGCGCAATATTTACCCATGCCAACGTTCCCTCTGACAGATTCCAGTCCTATCCCTAGACCGTCTTTAGGACCGACACCGATGAGAATCTTCAATCCTGACGCGTACTGCGACCTGTGCAATAAAGAGTTCTGCAACAAGTATTTCCTCAAGACGCACAAAGCGAACAAGCACGGTATCTACGCGGATTCACCTGGGCCCAGCTCCATGGACAACAACATCCCCGGACCGTTGTACCCAGGGAACTTTCCTGGGAACATGATCAAATTGGAACCACCGGCGACGCCGCCGACGCCGAGCGTCGCCTGCGATCTCTGTCAGAAGCGTTTCAAGAACGACGAATCGATGCGCAAACACAAGCAAAAGATGCACACGGAGTTGCCGGATCAGTCGCAGGAGCAATCACAGATAGGGCTGTCGCAGAACGAGGAGGACAGGGACACGTCTAGAGACAGTCTCGGAGGAATGGAGACGCTGTTCAAGCAAGAGTACGGCGTGGAACAGGAGGACGCGTCGTTTGTACCGGCACCGAGACACCTATCGCCCCAATCGATTCAGCAAGCACGAGACTCCGGGTTTAACGTCGATCGGCTTCGCCGTTTAGGTGTCATAAATCCGGACGCGTTCTGCGAGATATGCTGTAAAGAGTACTGTAACAAGTACTTCCTGCGAACGCATAAAATGAAGAGGCACGGTATCGTGATTCAGGACAACGAGAGGTCACCGGGTAATCCGGGATCGGTGGCGCCCACTTGGCATCAAGTGCAGACGAGCCCTTTGAATTTGATCGTGACCGAGAACGCCGGTAGCGGGACCGAGTCGAACGAACGTGCCGGAGAGGATTACGAGTGCAAACCGTGCGGAATACGATTTCAAACGATTGGCCTGTATCAGGCGCACTGCCGGAAGATGCACGAAAGCGAGGAACAACAGTCGCCTAAGCAAGAGTGCGAGTTCGAGACGCCCGACCAACCAAACGACTCGATCTCCGAGGATCTACAGAAGTTGCAGACGATGCTGTTACAGTTGAACGGTTTGAAGTCTGGCAAAGGATTGTCGTGCAACGTGTGCGGAAAAGAGTACGAGAACGGCGCGTCTTTGCATATTCATATGGCGACGGAGCACACAGCGATCGGCGAAGATTCGACGTCCTCGCCGCATGACAAATCACCGTTAACTGTTACGACCGCGTTTTGCAGCATGTGCGGCAAGGATTACGCGAGTCAGGACGCTCTGAGGAGACACGTCGCCGAGGAACATCAGCCGACTATCTCGAGTACCGTTCCTCACACTCCTACCACTGCTGCGACCACCACCAACACGAATTCAACCAGCCAAACACCGACAGAGAGAAAGGTGACGTCGATGACGCCTACGTCGAGCTACTGTGAGATATGCAACAAGGAATTGTGCAACAAGTATTTCATGAAGACGCACATGCAGAGGATGCACGGGATCGAGATCGAGAACGGCGCGCAGATCGGGGGCGTGATATGCAACATCTGCAACAAAGAGTTGTGCAGCAAATACTTTCTGCGCGTGCACAAGCACAACACGCACGGTATCGTCGACGAGAATACTTCGAGTTCGGTGAAGCAGGAGGCACACGAGGCGACGAACACCGACGACGCGGCATTGAAGCCGGAACAACTCGGCGATCTCAGTCACAGATATTTCACACACTTCACGGAGGTGTGTCCGATTTGCAGCAGAAGGTTCCGCAGTATAAAGTGGCTGAAAGCGCATCTGATGGGCGACCACGGGAAAATTGGTATCGACAAATGGCGCGAAATGGAGCAACAGTATCAGACAACGGCGAAATCGGGGAACAGAGCGGGGAATATGATGCCGAAGAGTGTTCAACCTGGCTCGAATTTGAAGATACCGAACGGATTCGAAATTTCGCAACAATTGAAATCCGATTATCCGGTTTTGGGAAACCAAGTGTTGTCCAATTTACTAGGGTCGTCGTCGGAAGATCAACAAATGAAAAGCTACCGTTGCTCCTACTGCAATTTCACAACCACGGTGCTGCCGTTCCTCTTTCTTCACGAGAGATCTCACGTGAACTCCCGCGAGAGCGCAGAGGGGGAGAAATCGTTTCAATGTCCAATCTGTTCGCAAGGCTTTCATCAACCGGAGATCCTGCATCAACATCTACTCGCGTCCCATCAGTTTCCCACGTTGCTGTCTCAGTTTCAACCCCCGGTGCTTAATAATTTAGGTGTGGACGCGGAGAAATTGAACGAGGTCAAAGAGAAGCTGGATCTCGAGGTGAAGGAGGATCGCATGGGGGACAGCCCTCAAGTCACTGCCAATCAAACGATCCCCGAGCCGATGAGAAATCAACGACAAGACGACACAGCGGTCCAAGTTACTCCTCAGGGTGTGTACAAGTGCGCACAGTGCGGTTACGCGACAACCAATTTGAATAGGATTAAGAAACACGTGAGGAAGGATCACAAAACGATCGGCGATCCAACGGACAGCGTGATCGCTGAACTGAGCAGAACGTTGAAAGACGTTGCCAACAGACACAAAGTGCCAGCTTGTTACGCGATGCCGCAAGACATGAATTCCAATCCTGACAAGACTATAATGCAGCCGTTTTTGATAGAGGAACAGGATACGATGCAGGTAGGCGAGGAATCCAGTTCAGAGAAACGATTCGCACCGGCGTTAGTTTATCTACCGGTGAAATCGCGAATCAACAACGCGCTCACCGCGTCCTTCACCCTTAGCCCCGCTTGA
Protein Sequence: MAHETTVPELTELDSDGSSCGERDARKRLRFDTDSQGPKKRRKQTTPVRFSSTLMTGVHEESNEEDDEDEDSEGKLSSQSPIPSQSSIRDENLNNEFRCQYCSQFFDSKETLNVHLDNEHGTANQTSQQCHNSRPSSAAIKQEPSQQLDQSENPVNLLSVKNFAINWLATGQHVQSHAQMQTQNEESWPGPASSQIPTLPNHLQVLSGFPGALAQYLPMPTFPLTDSSPIPRPSLGPTPMRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYADSPGPSSMDNNIPGPLYPGNFPGNMIKLEPPATPPTPSVACDLCQKRFKNDESMRKHKQKMHTELPDQSQEQSQIGLSQNEEDRDTSRDSLGGMETLFKQEYGVEQEDASFVPAPRHLSPQSIQQARDSGFNVDRLRRLGVINPDAFCEICCKEYCNKYFLRTHKMKRHGIVIQDNERSPGNPGSVAPTWHQVQTSPLNLIVTENAGSGTESNERAGEDYECKPCGIRFQTIGLYQAHCRKMHESEEQQSPKQECEFETPDQPNDSISEDLQKLQTMLLQLNGLKSGKGLSCNVCGKEYENGASLHIHMATEHTAIGEDSTSSPHDKSPLTVTTAFCSMCGKDYASQDALRRHVAEEHQPTISSTVPHTPTTAATTTNTNSTSQTPTERKVTSMTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICNICNKELCSKYFLRVHKHNTHGIVDENTSSSVKQEAHEATNTDDAALKPEQLGDLSHRYFTHFTEVCPICSRRFRSIKWLKAHLMGDHGKIGIDKWREMEQQYQTTAKSGNRAGNMMPKSVQPGSNLKIPNGFEISQQLKSDYPVLGNQVLSNLLGSSSEDQQMKSYRCSYCNFTTTVLPFLFLHERSHVNSRESAEGEKSFQCPICSQGFHQPEILHQHLLASHQFPTLLSQFQPPVLNNLGVDAEKLNEVKEKLDLEVKEDRMGDSPQVTANQTIPEPMRNQRQDDTAVQVTPQGVYKCAQCGYATTNLNRIKKHVRKDHKTIGDPTDSVIAELSRTLKDVANRHKVPACYAMPQDMNSNPDKTIMQPFLIEEQDTMQVGEESSSEKRFAPALVYLPVKSRINNALTASFTLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00224784;
90% Identity: iTF_00118237;
80% Identity: -