Basic Information

Insect: Gymnocheta viridis
Gene Symbol: zfh1
Assembly: GCA_956483585.1
Location: OY101440.1:109329294-109337339[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00016 0.017 16.7 0.7 1 23 198 220 198 220 0.95

2 15 0.054 5.8 8.7 1.2 3 23 228 248 226 248 0.95

3 15 0.00029 0.031 15.9 0.5 1 23 418 440 418 440 0.98

4 15 0.0007 0.075 14.7 0.3 1 23 446 468 446 468 0.98

5 15 0.00083 0.088 14.5 4.4 1 21 500 520 500 522 0.94

6 15 0.014 1.5 10.6 0.3 1 23 543 565 543 565 0.94

7 15 0.014 1.5 10.6 0.8 1 23 571 594 571 594 0.97

8 15 0.44 47 5.9 0.4 5 19 605 619 602 620 0.91

9 15 0.00026 0.028 16.0 5.6 1 23 629 651 629 651 0.97

10 15 0.059 6.3 8.6 1.7 2 23 657 678 656 678 0.97

11 15 8.3e-05 0.0088 17.6 0.2 1 23 687 709 687 709 0.98

12 15 0.0078 0.83 11.4 0.2 3 23 717 737 715 737 0.97

13 15 9.4e-05 0.01 17.4 0.5 1 23 743 765 743 766 0.95

14 15 0.00075 0.08 14.6 0.1 1 23 776 798 776 798 0.97

15 15 0.075 8 8.3 0.0 1 20 1375 1394 1375 1397 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00016	0.017	16.7	0.7	1	23	198	220	198	220	0.95
2	15	0.054	5.8	8.7	1.2	3	23	228	248	226	248	0.95
3	15	0.00029	0.031	15.9	0.5	1	23	418	440	418	440	0.98
4	15	0.0007	0.075	14.7	0.3	1	23	446	468	446	468	0.98
5	15	0.00083	0.088	14.5	4.4	1	21	500	520	500	522	0.94
6	15	0.014	1.5	10.6	0.3	1	23	543	565	543	565	0.94
7	15	0.014	1.5	10.6	0.8	1	23	571	594	571	594	0.97
8	15	0.44	47	5.9	0.4	5	19	605	619	602	620	0.91
9	15	0.00026	0.028	16.0	5.6	1	23	629	651	629	651	0.97
10	15	0.059	6.3	8.6	1.7	2	23	657	678	656	678	0.97
11	15	8.3e-05	0.0088	17.6	0.2	1	23	687	709	687	709	0.98
12	15	0.0078	0.83	11.4	0.2	3	23	717	737	715	737	0.97
13	15	9.4e-05	0.01	17.4	0.5	1	23	743	765	743	766	0.95
14	15	0.00075	0.08	14.6	0.1	1	23	776	798	776	798	0.97
15	15	0.075	8	8.3	0.0	1	20	1375	1394	1375	1397	0.93

Sequence Information

Coding Sequence: ATGGATAATCATGGATATTGCGGCATACAGTGGATACAACACCACACAAGTAATATATCCTCCCATGTAGGAGACATGAAAACTGCTGGTCAGTTGCTTATTGATCCTCAGCCACCGCGTGAAGAGGACCTCATGGCCAGTGCTAATTCTTCATCGGACTTTATGGTTACCGAAGATGACAACGATTCGACAACCACAGCCCAAATTGCTGCAGAAAATCTTATCTTTATGGCACGCGATGGTCAAATGATGACAGAAATAATAAGTCATGCTACGCACGATACAAATGGTACTGTAGTTATGGCTGCAAGTGACGGCGAACAAATTGACTGCGATACAATTATGGAACAGGCTGCCTTAATACAACAGCATGAAGATACGGGAGGAGGAGTTTATAGCGTGGATAATTTTACCGATAATACACCACAAATGGTTACAGAAGAGGTCATCACTGATGACTGGGTGCAACATCAAGGTGAAGAAAgagtGGAAATACCCGCGGAACAGATTATTGGTTCGAGTTCTCAAGTACTATTAGACATTGAAGTTCCCTTGCCAACTGTTCAAGATGAATACACTGCCCTACGACCGTACCCCTGTGACTTTTGTAGCCGCCGTTTTCGTAAGAAAGCTAGTCTAATGAATCATATGGTAGCCCATCAAACAGATAGGCCACATTTGTGCAAATTATGCGGTGCAAGATTTTTAAGGAGGCAAGATCTTATTAATCATCTCAAGGGGCACGCTGAAGAACCAACAGAGCAACCACACATCGATGATAGTGATTTTATGCATTTCGTTGGCGACACTACGTCCCCTACACAACGTACTTCCAATGATCACTATTATGAGCAGGATTGGAGTGTACCCGAAGATTCGGTAACCATACCAACAAAATCTAGTCGCAAACAACAATACACTACCTCCACATCTAATCAACAAATAAGAATGGATACTATAATATCTTCTGCACCGGATGTGCTAACAACAGCTCACTCTGCAACGGCACCTCCAAGAGGACGTATAAGTCGTCTTAAGCCTAAAGAGGACACTTCCTATATAGTGGAAATGCCCAATAATTGTACGTCAAGTGAAATGATTATTTCGTCGGCCTACAGCATTGTAGGATGTGATACTTTGTCTGCCAATACGGCATCAGTTAAACTGTCTCAAGACAATACACCCGCTCTGCCAGAAAATGACGAAGTACAAAACGTTTTTCATTACCCTATAATTGACGATAGTAAACCATTTGTTTGTCAACAATGTGGTTTAGCCTTTTCAAGGGAAAAAGCTATGCTTTCACATACAAAGACCCATCGCAATGATTCTCCGTATGAGTGCCCCCAATGTAACGAATTGTTTTGGGATCAAAGTAGTTTACAAGACCATCAAAAATCACATCAGTTTGAGGAGAGTAATTCAGAATATGATCCAAATGAGGGTGAAGATGAAACACTAACGGAATCAGAGTCCGAACAACAGTTGTATGGTGAATATTACTGTAGCGAATGCGGCATGTCGTTTCATCGCCAGGATCTCTTAAGACGTCATGCAAAATGTCATGCCAAAGGAATCGTGGATTCGGGCCAGTCTAATAATAATGGTATTGAAAGTAGAGATCAACATTGCTGCAATACCTGTGGTGAGACCTTCGCTGAGGCGTTAGACTTACTGGCCCATGCTGAAATACATGCGCGTTACCCGCCTTTTAAATGTGTCTTATGTGGTGAATCTTTCTTCGAGGAAAATACCATAAAAAAACATCTGCAGTCACAGCACTCTAATGAACTTACTGAAAACTCTTGTATTTTATGTGGTAAAGAGTGTCGCGACCGCAAAGCTTTGATGAAACATGCCTGGGATCATTCACGAGAAAAATGTCACTCCTGTTCAAAGTGCGGGAAAAATTTCCACAACAAAGCTCGACTTAAACGTCACATGGCCTCGCATCGTGATAAATCCGTACAATGCGATGTTTGCCATGAAGAATTTCCGGATGGTCGAACTCTTTCTAATCACCGCCATTCACATAGTGCCACTTCGGCGGGTAAATTATTTCCCTGCCTGGAATGTGGAAAGACTTTTGGATCTCGAAGTTCTCAACAAATTCATGTTCGCATACATACTGGGGAAAGGCCATACGGCTGTCGTTTTTGTTGGAAAGCTTTTGCCGATGGTGGTACTCTGCGAAAACATGAACGTATACACACAGGTGAAAAGCCATATGCATGTTCCGTTTGTCCGCGTGCTTTCAATCAACGTGTTGTGCTTAGAGAACATATACGGTCACATCATTCGGGTTTGGATGTAAAGAGAGGTATTTATTATTGTACTGTTTGTGGAGCTGAACTATCGTCATCGAGTGATTTAATACAACATTTAATACAACACAGTGATATGAATACAGCTATGCAAAGGCAACCAGTGACTGGCCCTCGTAAATATAAACGTCGACGCAAATTAAAACCTCATGAACTTGCACGCCTTAAGCGTGAAGTAAAGCTCAATGGTGGCACAGGTAGTGACATTGATTTGTCCGATTTTGATATTGACAACGTCGACGATTTGCTAAGCATGGCAACGGAGAGCCACATTGTCCCTGAAGCAAATGCCGGTACTCAGGAGCCATCAACAATATTACAAGGAAAATCTACAAAAAGAAAGCAAGTTCCTTCTACTACACAGGCCGAAAgcagtaataataaaaataaatccgCTCAAAACATATCTGAATCTAACATTTTAACAGATCAAGATGATTTTGATTTAGATGTTGGTATAGATGATGATACACTTAAAAAACAACGTTACAACTCTACCAGTAGCGATAAAAATTGGCCAACAAAACAAACTGAAGACTCCTACAAGTCTTTGCTATCGAATTTAGAAACGACTCTTCAAAATATAGATACTCTCGTAGTAGGACCATCAACCAAAACCACGAATATTGTAGAAAACAGATTGCCAGAGCCACAGCATCGCCAAACAAGACGTAAACTAAAACATGGAACAAAATCTACGGCCCAGAGAACACAACAGGTGCAATTAACCAGAACAGATAAAGAATCAACATCATCGGCTAATGGGAGATGTCGTAAGGGTAAAACTGGTGCCGCAAAACAGGCCAAAGGTCCACAAATGATTCatacagaaaaattttctattacaaCGAATGACATTGCTAGCGGGTTAGGAGTTTCGATTGGGAGAAAGAAAAGATCAAATAAAACTCGAATTACAAATGTGGAAAAAACTTCGACCATAGTGGATGATTACGATATAATTTCCCCCGCCTTGCAGCCACCTAAACAAATTAGTTCCAGCcctttacatataaaacaagAACAAGACAATCACCACTATCAACATCagcaacagaaacaacagcatCATCTTATGAAAAATCCTCCAAATTCAAACCACAACACTTCTGCCCGTACGCAGTCAACTACCCGCCATATGAACGCAAATGATCTCTATGATGCCCACTTATTGCTAGAAGCCTCTTGTTTGCGTAACGATCTAGATGAATTTCTTAGATCTCCTTCAAAATCTGACAAATCAAGACAACGTTTTACCAGTGAATCATCTTCCACTCAATTTTTAGCTGAACAATCAGAAGAAGAACAACACATGATAAAAATAGAACCAACATCACCTGATTtaagagaaatagttaatggTGCGATCAATACTGCTTCCGCTCAAACAGACTTGGATTTAGAAGAAAAGTCtatcaaaaaacataaaaatcagaAATCTTCCCGAAGACAAAGGACATTAAGTTCGAATCGCAAGTATTTAGAGTTTGGGAATGATACCAGCAGTACCGAAACCACAAACCTCAATAAAAAGCATTCATCGAAATCACTAACATCGAAGTCTTCGAAATCTACTAGAACTAAATCCGACAAAAGTTCAAAGTCTGTTCAAAATACTACAGCCACAAACTCATATTTAGATTATACCATGGTGGATACTTTCAATGCGGTTACAAGTTCCTCAACAAATAATAACTCCTTCGCTTCTATCTCTGCGGTAGTTTCAGCAGCCGATGCTTCTGCAGCGGCCCAACAAAATAGCTCAACTGCTGCCGGTCTTCGTAAACCTCAACGATATTTTGAATGCGAAATGTGTAGCGCAATTTTTCCAGATCGTGCTCAGCTGTTGGACCATGTGcccatacatatataa
Protein Sequence: MDNHGYCGIQWIQHHTSNISSHVGDMKTAGQLLIDPQPPREEDLMASANSSSDFMVTEDDNDSTTTAQIAAENLIFMARDGQMMTEIISHATHDTNGTVVMAASDGEQIDCDTIMEQAALIQQHEDTGGGVYSVDNFTDNTPQMVTEEVITDDWVQHQGEERVEIPAEQIIGSSSQVLLDIEVPLPTVQDEYTALRPYPCDFCSRRFRKKASLMNHMVAHQTDRPHLCKLCGARFLRRQDLINHLKGHAEEPTEQPHIDDSDFMHFVGDTTSPTQRTSNDHYYEQDWSVPEDSVTIPTKSSRKQQYTTSTSNQQIRMDTIISSAPDVLTTAHSATAPPRGRISRLKPKEDTSYIVEMPNNCTSSEMIISSAYSIVGCDTLSANTASVKLSQDNTPALPENDEVQNVFHYPIIDDSKPFVCQQCGLAFSREKAMLSHTKTHRNDSPYECPQCNELFWDQSSLQDHQKSHQFEESNSEYDPNEGEDETLTESESEQQLYGEYYCSECGMSFHRQDLLRRHAKCHAKGIVDSGQSNNNGIESRDQHCCNTCGETFAEALDLLAHAEIHARYPPFKCVLCGESFFEENTIKKHLQSQHSNELTENSCILCGKECRDRKALMKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVQCDVCHEEFPDGRTLSNHRHSHSATSAGKLFPCLECGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDVKRGIYYCTVCGAELSSSSDLIQHLIQHSDMNTAMQRQPVTGPRKYKRRRKLKPHELARLKREVKLNGGTGSDIDLSDFDIDNVDDLLSMATESHIVPEANAGTQEPSTILQGKSTKRKQVPSTTQAESSNNKNKSAQNISESNILTDQDDFDLDVGIDDDTLKKQRYNSTSSDKNWPTKQTEDSYKSLLSNLETTLQNIDTLVVGPSTKTTNIVENRLPEPQHRQTRRKLKHGTKSTAQRTQQVQLTRTDKESTSSANGRCRKGKTGAAKQAKGPQMIHTEKFSITTNDIASGLGVSIGRKKRSNKTRITNVEKTSTIVDDYDIISPALQPPKQISSSPLHIKQEQDNHHYQHQQQKQQHHLMKNPPNSNHNTSARTQSTTRHMNANDLYDAHLLLEASCLRNDLDEFLRSPSKSDKSRQRFTSESSSTQFLAEQSEEEQHMIKIEPTSPDLREIVNGAINTASAQTDLDLEEKSIKKHKNQKSSRRQRTLSSNRKYLEFGNDTSSTETTNLNKKHSSKSLTSKSSKSTRTKSDKSSKSVQNTTATNSYLDYTMVDTFNAVTSSSTNNNSFASISAVVSAADASAAAQQNSSTAAGLRKPQRYFECEMCSAIFPDRAQLLDHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00259964;
90% Identity: -
80% Identity: -