Basic Information

Insect: Gymnocheta viridis
Gene Symbol: Hr39
Assembly: GCA_956483585.1
Location: OY101444.1:25084460-25091920[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.22 4.5e+03 -2.1 0.5 98 161 140 203 96 224 0.57

2 3 1.3 2.7e+04 -4.7 7.6 49 134 276 351 231 427 0.41

3 3 1.1e-90 2.3e-86 292.0 20.0 1 408 498 897 498 897 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.22	4.5e+03	-2.1	0.5	98	161	140	203	96	224	0.57
2	3	1.3	2.7e+04	-4.7	7.6	49	134	276	351	231	427	0.41
3	3	1.1e-90	2.3e-86	292.0	20.0	1	408	498	897	498	897	0.85

Sequence Information

Coding Sequence: atgtctacCATTAAAACCGAAAATGGAACAGGAGGAGCAGTGGTCACTAACACAGCAGCAAATGGAACTTCTTTTCAATTGCCCCTAAATATGAGCAATACAATGGGAGCGGGAGCAATTGGAAGTAGCGGCATTACGACCACCACTTGTACAACCACCACCACCAGGCATAATGTTTCTGTGACAAATATCAAATGTGAAGTGGATGACGGTGGCAATTCTTCGTCCTCAACGAATGGCAATATTGTTTCGGTGGGATATTATAATGGTTCTAGGGGCATAAGTGGGACAAGTGTAATAACAGCTGGTCATGGTGTACGAATACCGGTGACCAAAGCAGAAGACTCGGACTCAGAAACGGAATTgacaaatatagaaaatttaaaagttacaCGTAGAGTGGCTAGTTCTTCTTCCAGTACCACAAATAATCAACATAATGGTCCACGGCCCATGTCATGGGAAGGAGAGTTGTCCGAGAATGCAGACACTCGAGAGGCTGAGTTAATGGACACGGATACTACCATGAGCAATGGTGGCATGCAGGAACCCTCAAACGCCGTGGCTGTAATAAAAAGTGAAGCTACTACCACCACATCTTCTACACCTGGTGGACGAGGTGCTTTAATCAAAACTGACACAGAACAATTAATGTTGGATGTTCATCATGCGGTAACTGGTGGTGGAATTTATCATCCCAAACTAAAGTTGGCACCCACTCAAAGTGATCCCATCAATTTGAAATATGAGCCACCCGATCAATCAGCTTTGGTGAATTCGCCATTGATGGCCCGCCAAAAGTCCACCACAGCTTTGCCTCATTTACCTGCCAATCCCAGTCCAGATTCTGCCATACATTCCGTTTACACTCACAGCTCACCTTCCCAATCACCCCTGACATCACGACATGCACCCTACACCCCCTCACTGTCGCGCAATAATAGTGATGCTTCCCATAGCTCGTGCTATTCCTATTCCTCGGAATTCAGTCCCACTCACTCACCCATACAAGGCAGACATCCAGCGCCTCATGGTGTATATGGTAGTTTTAATGGTGGCACGGCCAATAGCTTACAACATTCCGCTTTACTCTACAGACCCATGATGGGTTCAGTGCAAACTGGCCAAACAGCCAAGTTGGATGCAGCAGCATCAGCAGGGGAGGCGCAGAATTTATCAATGGATGCCACTACATCATCTTCGACCTTCAATATGGCCAGCGATTCTTCGGGGTTACCAGCCTCCCCAGCCGGCATATCCCGCCAACAGCTAATAAACTCTCCCTGTCCCATATGTGGCGATAAGATATCTGGTTTCCATTATGGTATCTTCTCATGTGAATCCTGCAAAGGTTTCTTCAAGCGTACCGTCCAAAATCGTAAGAACTATGTTTGTGTACGGGGAGGGCCCTGTGCGGTAAGCATTACTACCCGTAAAAAATGTCCAGCTTGTAGATTTGATAAATGTCTGCAGAAAGGCATGAAACTGGAAGCAATAAGAGAAGATCGCACACGCGGAGGCCGTTCTACTTATCAATGCTCTTACACTCTACCCAACTCCATAATGAGTCCTTTACTTTCGCCcgaacagcagcagcaacagaaTTCTGCACAAAGCCTAATGGCCAGCCAACAACATTCACAATTACAACATCAGCTGCAGCAACGTTTAAATCCTTCCCTACAATCAGCGCATCTATCAAATGGTTATGGTTCCCAAAACCAATccacaacaacaattaaaaccGAACAATGTGATCCATATAGCAAGAATCTGCCGGCCGCTCATTCGCCCTCATTGAATGGCTTACATACGTCCACTTCACGTTCACATTCTCATTCGTATGCTACAAATATTTCTAATTCTAATTCTTCCGCCTCATCCAATTCACTGCATCACAACAGTATTCCCCAACTTCTACAAGAAATTATGGATGTTGAACATCTGTGGCAATACACAGATGCCGAGCTGGCACGACTCAATCAACCATTGACCGCATCCTCTAGTTCGGCTTCACTTAATTCCAATTCAACGGATTCTTCTGCAGCTGCCAATCAAATGACCAATCCACTGCTGGCCAGTGCTGGTCTCTCCTCTAGCACCAACCCCGATTTGATAGCTCATCTGTGCAAGGTGGCCGATCATCGTTTGTACAAGATCGTAAAGTGGTGCAAAAGTTTGCCGTTGTTTAAGAACATATCGATTGACGATCAGATTTGCCTACTCATCAACTCTTGGTGTGAACTTTTACTTTTCTCCTGTTGCTATCGTTCCATCGATACACCGGGAGAAATTAAAATGTCCTTGGGCAAAACTATAACACTGCCACAAGCGAAACTTACTGGTTTTCAGCCCTGCATTGAAAGAATGCTGAATCTGACAGATCATTTAAGACGTTTACGTGTTGATCGTTATGAATATGTTGCTATGAAAGTTATTGTACTGCTGCAATCAGATACTTCGGAATTGCAAGAACCCGTCAAGGTGAGAGAGTGTCAGGAAAAAGCTTTGCAAAGTTTACAGGCCTACACCTTGGCCCACTATCCAGATTGTCCATCCAAATTTGGCGAGTTATTGCTGCGTATACCAGATTTACAGAGAACGTGTCAGctgGGCAAAGAAATGCTGTCTATTAAATCCCGTGATGGTGGTGActttaatttgttaatggaaCTTTTAAGAGGAGAACATTGA
Protein Sequence: MSTIKTENGTGGAVVTNTAANGTSFQLPLNMSNTMGAGAIGSSGITTTTCTTTTTRHNVSVTNIKCEVDDGGNSSSSTNGNIVSVGYYNGSRGISGTSVITAGHGVRIPVTKAEDSDSETELTNIENLKVTRRVASSSSSTTNNQHNGPRPMSWEGELSENADTREAELMDTDTTMSNGGMQEPSNAVAVIKSEATTTTSSTPGGRGALIKTDTEQLMLDVHHAVTGGGIYHPKLKLAPTQSDPINLKYEPPDQSALVNSPLMARQKSTTALPHLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHPAPHGVYGSFNGGTANSLQHSALLYRPMMGSVQTGQTAKLDAAASAGEAQNLSMDATTSSSTFNMASDSSGLPASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCAVSITTRKKCPACRFDKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSIMSPLLSPEQQQQQNSAQSLMASQQHSQLQHQLQQRLNPSLQSAHLSNGYGSQNQSTTTIKTEQCDPYSKNLPAAHSPSLNGLHTSTSRSHSHSYATNISNSNSSASSNSLHHNSIPQLLQEIMDVEHLWQYTDAELARLNQPLTASSSSASLNSNSTDSSAAANQMTNPLLASAGLSSSTNPDLIAHLCKVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCYRSIDTPGEIKMSLGKTITLPQAKLTGFQPCIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTSELQEPVKVRECQEKALQSLQAYTLAHYPDCPSKFGELLLRIPDLQRTCQLGKEMLSIKSRDGGDFNLLMELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01259264;
90% Identity: iTF_00760170;
80% Identity: iTF_00760170;