Gvir031019.1
Basic Information
- Insect
- Gymnocheta viridis
- Gene Symbol
- Ssb-c31a
- Assembly
- GCA_956483585.1
- Location
- OY101444.1:1971387-1971759[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.37 1.5e+04 -3.3 0.2 29 37 18 26 17 26 0.77 2 2 1e-28 4.3e-24 84.9 0.9 1 52 45 96 45 96 0.97
Sequence Information
- Coding Sequence
- ATGCCAAAAACTAAGAAACAGGAATCATCAAGTGACAGTGACTCCGGGCCAGACGATAGGTATCCGCCTACGAAGAAATCTAAGGAGTCGTCCAGTGGCAAATCAACAAATGGTGGAAAAGATTTGAATCATTGGGTTTTGGAGAAACAACGCCAGGTCCACATTAATGAATTTAGAGGTCGTAAATTAATTGATATACGAGAATATTATGAAAAGAATGGTGAATCCCTTCCTGGCAAAAAAGGCATTTCTCTGTCGGTTGAGCAGTGGAAAAAACTACTTGAGATTGCCGAAGAAATAAATCAGGCAATTGTGCGAGActga
- Protein Sequence
- MPKTKKQESSSDSDSGPDDRYPPTKKSKESSSGKSTNGGKDLNHWVLEKQRQVHINEFRGRKLIDIREYYEKNGESLPGKKGISLSVEQWKKLLEIAEEINQAIVRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01397441; iTF_01399462; iTF_01074483; iTF_01398493; iTF_01138019; iTF_00045355; iTF_00258886; iTF_00259775; iTF_00741883; iTF_00655326;
- 90% Identity
- -
- 80% Identity
- -