Gvir017777.1
Basic Information
- Insect
- Gymnocheta viridis
- Gene Symbol
- Rel
- Assembly
- GCA_956483585.1
- Location
- OY101442.1:18310927-18319181[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.4e-53 7.8e-49 167.1 0.5 1 168 146 324 146 325 0.93 2 3 1.1 9.5e+03 -2.4 0.0 31 72 630 671 628 679 0.85 3 3 2.5 2.1e+04 -3.5 0.0 53 87 987 1023 981 1044 0.67
Sequence Information
- Coding Sequence
- ATGATGCCACATTTTAGCGTCACAAATGACAAGGACATAACAGATTTAGATACACTTGAACGTATACGAAGTATTAGCGAATCTTCTCTGAGTGGTACCAGTGGTTATAACAGCACAACTTCTCCAGGTCCAGATAATTCTCCAGTTTCAACTGGATATTCTCCGGTACAATCACCAGATTCGGTTCTACAAACAGAATTTTCCCAATTGCTTATACCACCAGCAATATCTTATCAACAAAATTCCTTGCAATATGCACAACTGCAGAATGTGGatatgaatataaataacaGTCAGCCAATGTTCTATCAACATAATATGAATTTCTCGCCTCATTTAAGCTTTGTAAATACTGGGAATAGTCAATTACCTCAACAGCCGATAGCATCAACAGCAATGTCTTATCCAGAAgtaaaatatgaatatgaagcaACTTTGCGTATAATCGAGCAACCGGttgaaaaatttcgttttcGCTACAAGTCGGAAATGCATGGCACACACGGCTCTTTAAATGGCACAAACTCGCAGAGAAATATTAAAACGTTTCCCGAAGTTGAATTGTGCGGTTATAAGGGACCAGCTATCATACGCTGCAGTCTCTTTCAAACTAATCTTGAAAGTCCACACTCACATCAACTAGTGGTGCGCAAAGATGACCATGATATATGTGATCCGCATGAGCTGAAAGTTTCTCAAGAGGTTGGCTACTTTGCCGAATTCAAAAATATGGGTATTATACATACGGCCAAAAAATTCATTATCGAGGAATTATTAAAGAAGAAGCGGAAGCGACTGGGCCGCGATTTTTTGACGATAAAGGAAGATCAAGAGTTGCATAAGCAAACAGAAAAAGAAGCAAAGGATATGAATTTAAATCAGGTGCGTCTATGCTTTGAAGCATTTTATATTGAAGACAACAACTCATACACACCTATTGCTCCTCCAGTATATTCCAATCCTATTAACAATCGTAAATCAGCTCAGACTGGAGAACTGCGCATTGTACGCTTGAGTATAGCAACGGGTAATGTTGCCGGCAACGATGATCTGATGTTATTGGTGGAAAAAGTAAgcaaaaagaatataaaagtaAGGTTTTATGAAATGGTCGAAGACGAACAAGTGTGGGAGGCATTTGCATCTTTTCGGGAATCCGATGTTCATCATCAATATGCTATTGTATGCAGAACACCACCCTATAAGGACAGAGATATTGACAAAGCTGTTGAGGTATTTATTGAACTCGTTAGGCCCTCGGACGATGAACGAAGCTATCCACCAGTATCATTTCGATATAAGCCAAGCTATGCCGTAATATCGCGTAAACGGAGACGAACATGCACATCTTTTAATAGCGGCTCTTGTAGTAATTCTGGATCTTTAAGTTCGGGAGAAATACCTAAAACAATTCAAGAACAACAAAACTCTATGAACATTGACTGTGCTTCAACTGAACTTAAGTCTATATTAAACAACactgattttaataaatcagaTATTTCACTTGACTCAAACTTATTAGCCTATTTGGAGGATCCAAAATTGACGGATTTCGACGCAGTTCTCAATAACACAGAAGGAGAGCAATTTATAAATCCTATCGAAAAAGATGGGATTTGTGTTGGCAGCGACGCTAAAAAATCTATGTATCATTATAAGAAGCATATGATTAGCAAAAAGCAAATGGATATGGCCAAACAAGGTGTACAGCCTCAACCGCCTAATTTGTACTTACGgcgtattttaaatatatttcaagatACCATCAGGTCTGCGACACCACTTAACTTGACAAGACGGAACTGTGCTGCTGAGCAAATTACTAAAATCATAAATGAACATTCAGAAAAATACGGAGATTCTCTAATACATGAAATTGTGCTATCGAATAACAATAAACTTGCTATACCGATTTTTAAGGTGTTggactattttaaattaaatgaactctTAAATTCTTtggtaaataaacaaacacaaactgcgttACACTATGCCTGTCTTTATGGCCAGCCGAATTATATACGACCTCTATTAAAATTGGGCTGCAATCCTAATATCCAAGATGCTGATGGTAATACTGCACTTCATATTGCAGTGGCTGAGAAGCACTTGAAATGCTTGGAAAGTTTCATAAATTCGGAAATGACTTTAAATATAAACCATTTAAATGATGATGGATTTACGCCATTACATTTAGCCATACGTGATAACAATTACGACATTGTCGCGAAACTATTAAAATATGATGCAACTGCAGTAATAACGCCAAGTAGTAAAGATGGAAGTAGTGCTTTACACATGGCGGTACAgcaacaaaatctaaaattggTAAATATTATATTGGAAAATGAACAGTTAGTCGCTTCTGTATTATATGCAACCAATAGGGCTGGTTACAATCCATTGGATTTGGCTAAACAACTCGTTCCAAGTGATGATCAGGggaaaaaaattctaaacgTACTTCTTGGATTCTATAACAAATATCCATCCCCTTCTAAAGCGCAAAAAATGGATATAAAAACTTCTGATGATGACTTAGATGAAGTACATGAAATCATtataaaagaagaagaaaattcaTGTTCATCTACCGAAGACGATGATGAGGATAACATCAGCGGTATCAGTACAATTGAGTCAAAAACATCATCGATTACAGAAGCATATTGCATTTCAAActcgaaaataataaaagaatctacaataaaacaagaagaaatTGCTCTTAGTATTCTCAGTATAACTGAGTTGGAAAAGGGTTTAAATGATAAAGCAATTTTCTCGAAACTCTGCCTTGAATTAAATGACAATGAAAAATGGAAGGGAGTAGCAAAAGATATGGAACTGCCGCATTTTTATTTGACGAATTCCGAAGCTTTTCTAAACTCTATGGCTCAAATTATCGATGGCAAAGGTATTGCTGCCCAGATACGGGCAGAAATTCGCAAAGAGGTGGATATATTTATAGCTCAAGGTAATCGTCTACCACATTTAACATGTATAATCGTTGGTGAAGACAAAGCCAGTGAAACGTATGTGCGAAATAAAGTCAATGCTGCTAAAGAAGTTGGCATAACAAGTGAGACTAAACGGTTGCCATCAACTGCTACAGAAGAAGAACTCTTGGATTTGATTGAACAATTAAATAAGGATTCAAATGTCGATGGAATTCTTGTACAATTGCCGGTACCGGAACAGATAAATGAGCGTAAAATTTGTAATGCCGTTGCATGTGAAAAAGATGTTGATGGTTTTAACGTCTTTAATGTGGGCCGTATGTGtctcgatatgaaatcaatgatACCAGCTACACCTTTAGGTGTAATAGAACTGCTGAAACGCTCAGGAATTGATACGTTCGGCAAAAATGCTGTGGTCGTAGGTCGTTCAAAAAATGTTAGTATGCCAATTGCCATGTTAATGCACGCCGATGGTAGACATGAAACTGATGCCATGGATGCTACTGTAACAATTTGTCATCGTTTTACGCCGCCAAAGgaattggaaaaatattgcTCAATGGCTGATATTATAATCACAGCAACTGGCATTCCTGGtataataagaaaagaaatggTAAAGCCTGGAGCATGTGTCATTGACGTTGGTATTACTCGCATTACTGACAGCAATGGAAAAACCAAGTTAGTGGGAGATGTAGATTATGATGaagTTCGCCAAGTGGCTGGATACATTACACCAGTACCTGGTGGTGTGGGTCCAATGACTGTGGCCATGTTAATGCGAAATACTTTAACTTCTGCGAAAAACTTGGCTGCCAAAAAAGTTTAG
- Protein Sequence
- MMPHFSVTNDKDITDLDTLERIRSISESSLSGTSGYNSTTSPGPDNSPVSTGYSPVQSPDSVLQTEFSQLLIPPAISYQQNSLQYAQLQNVDMNINNSQPMFYQHNMNFSPHLSFVNTGNSQLPQQPIASTAMSYPEVKYEYEATLRIIEQPVEKFRFRYKSEMHGTHGSLNGTNSQRNIKTFPEVELCGYKGPAIIRCSLFQTNLESPHSHQLVVRKDDHDICDPHELKVSQEVGYFAEFKNMGIIHTAKKFIIEELLKKKRKRLGRDFLTIKEDQELHKQTEKEAKDMNLNQVRLCFEAFYIEDNNSYTPIAPPVYSNPINNRKSAQTGELRIVRLSIATGNVAGNDDLMLLVEKVSKKNIKVRFYEMVEDEQVWEAFASFRESDVHHQYAIVCRTPPYKDRDIDKAVEVFIELVRPSDDERSYPPVSFRYKPSYAVISRKRRRTCTSFNSGSCSNSGSLSSGEIPKTIQEQQNSMNIDCASTELKSILNNTDFNKSDISLDSNLLAYLEDPKLTDFDAVLNNTEGEQFINPIEKDGICVGSDAKKSMYHYKKHMISKKQMDMAKQGVQPQPPNLYLRRILNIFQDTIRSATPLNLTRRNCAAEQITKIINEHSEKYGDSLIHEIVLSNNNKLAIPIFKVLDYFKLNELLNSLVNKQTQTALHYACLYGQPNYIRPLLKLGCNPNIQDADGNTALHIAVAEKHLKCLESFINSEMTLNINHLNDDGFTPLHLAIRDNNYDIVAKLLKYDATAVITPSSKDGSSALHMAVQQQNLKLVNIILENEQLVASVLYATNRAGYNPLDLAKQLVPSDDQGKKILNVLLGFYNKYPSPSKAQKMDIKTSDDDLDEVHEIIIKEEENSCSSTEDDDEDNISGISTIESKTSSITEAYCISNSKIIKESTIKQEEIALSILSITELEKGLNDKAIFSKLCLELNDNEKWKGVAKDMELPHFYLTNSEAFLNSMAQIIDGKGIAAQIRAEIRKEVDIFIAQGNRLPHLTCIIVGEDKASETYVRNKVNAAKEVGITSETKRLPSTATEEELLDLIEQLNKDSNVDGILVQLPVPEQINERKICNAVACEKDVDGFNVFNVGRMCLDMKSMIPATPLGVIELLKRSGIDTFGKNAVVVGRSKNVSMPIAMLMHADGRHETDAMDATVTICHRFTPPKELEKYCSMADIIITATGIPGIIRKEMVKPGACVIDVGITRITDSNGKTKLVGDVDYDEVRQVAGYITPVPGGVGPMTVAMLMRNTLTSAKNLAAKKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01074216;
- 90% Identity
- -
- 80% Identity
- -