Gvir003090.1
Basic Information
- Insect
- Gymnocheta viridis
- Gene Symbol
- dl
- Assembly
- GCA_956483585.1
- Location
- OY101440.1:53473811-53477044[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.4 2.8e+04 -4.0 0.6 119 135 38 54 30 64 0.51 2 3 7.2e-76 6e-72 242.3 0.1 1 169 77 247 77 247 0.99 3 3 0.72 6e+03 -1.8 2.0 105 153 443 488 426 499 0.54
Sequence Information
- Coding Sequence
- ATGTATCAAAACCCTGGTAATAATAACGTATTAGCTGGAGAAGGAGAACCAGTTGATGGGGATTGTGGTTTAACAGCCAATAATCCAAACGCACAAATTATGGATTCAattcaacaacagcaacaacaacagcagcagcaacaaaaacaacaaaatataaattataatggTATGCCATCACAGCAGCAGGCAACAAATAACGGTAAAAATGTACGCAAAAGACCTTACGTAAAAATAACAGAGCAACCGGCCGGTAAAGCTTTAAGATTTCGTTACGAGTGCGAAGGTCGTTCAGCTGGTTCTATACCAGGTGTAAATTCGAcagcagaaaataaaacatatcccACCATAGAGATTGTAGGCTATAAGGGACGTGCAGTAGTTGTTGTGTCATGTGTCACCAAAGATCAACCCCACAGACCTCATCCTCATAATCTAGTCGGCAAAGAGGGTTGTAAGAAAGGTGTTTGTACACTTGAGATCAACTCAGAGACCATGAGGGCCGTGTTCAGCAACCTCGGCATACAGTGCGTCAAGAAGAAGGACATAGAGGCGGCACTTAAAGCTCGTGAAGAAATTCGCGTAGATCCTTTCAAAACTGGCTTTACGCATCGGTTTCAACCCTCTAGCATTGATTTGAACTCGGTAAGGCTATGTTTCCAAGTGTTCATGGAAAGTGACCAGAAAGGACGCTTTACACAGCCTTTACCGCCGGTAGTCTCCGAACCGATATACGACAAGAAAGCCATGTCCGATCTGGTCATATGTCGTCTCTGCAGTTGTTCGGCAACTGTGCTGGGTAACACACAGATAATATTGCTATGCGAAAAAGTAGTCAAGGAAGATATTACTGTGCgtttttatgaagaaaataatGGCCAAATCATATGGGAGGCATTTGGAGAATTTCAAATCACCGATGTACACAAGCAGACTGCCATAGCATTTAAAACGCCGCGATATCGTAAAATTGACATTACAGAGCCTGCGAAGGTGCTTATACAGCTGAAACGTCCATCGGATGGTGTTACGAGTGAAGCACTTCCATTTGAATATGTACCCTTGGATACAGGTAGGAAACGATTTTTGGATCTTCGTCGGAACCTCAAAAGGAAACCCGACTtagatatttttcaagaaattctCTGTACCGAGATAAAAGAACAAGTGTGCAATGACGAATCGGAAGTTATTGATTTAGATGCGCCAACTATTGAGGAATTACCAGAACCTAAATATTTTCAACCTCAAGACGAAACTGTATTGACTTCGACTAAAGACACAACGAACAACTACGACGAAGAAGTCAAACGACGTAGTGAAGAAGAAATTGATTTGATTATCGATGAGAAAATGCGTGAGTTGGAGCAACAGCATCATAAACAATCGGCAGAAGATCAAAATGCCTCCTTGCGAGAGATCGCTGAAGTTTTCAATGCAAGTCAACAAAATGATAAAGATCAAGAGAATCAGACCGTAGTAATGTATACGAATGAAAAAATCACGGAATGGATGAATTCGAATAAATTGCTAGAGCTGAAAAATCCAACTTTCAATGAATCTATTGAAACCAACTCCTCCACTACTACAGTAAATACTCAAGTGCCTGCCAATGATTTGGAGGATAAAACTTTAAACGACCTGCTGGAACAGGTTGCCGAATTGGACGGAATATATTCAGATCATGTTATACGACGTGATACTTATAACAGTACTCTGATAAATGAACTAAATGGTATTGACTCTTGTGTCCCCACAACAGATGGTACCTTGGTAGATGGCGGCCAAACGGCAATGGAAGTGGAGGAACAATTTGATGATACTGCAACATATAGTAGTTTACAAATAGCTTTTAAGAACCCAATTTTCTTACCAATGTCTGACATTATGCCCTTAACACCACCAGCTTCTAATTTGAAAGCTGACTTTGAAAGTGATGATTATGATCCAATTGAAGTTCGGACTAGTCCGACTTCTACGACGTCGTCACCACCAGCGGCAGTAGTCAGCATGCAGAATCCCGATATTATTGCTCAATCACAATCTCAATTACAAGCGCCACCTCGACCAGCGCCACCACAAGCCAACTCACCCCAAATGCATGTTACGGCAGCTGAAGAGGAAAAGTTACCACCGCTGCCCCCAAAGCGTTTACGCAAACAAGATAGCAATGCCGAAAATCGCTCAATTGAAGCCAATATTGGGGACACTTTAGATCGTAAATCGCGTCAACAAACACCGATTATCATAATGAAAACTCCAGATCAATCGCCACCTACTAAACGTCTGCCACAAAAACCCGGTAGTTCTAGTACTTTGTCGAAACAGAAGAAACCaggatttttttctaaactattCTCTCGGCGCAAAAGCAAATCCGATCTAAGTCAGTCCGGAGATCAAACCGTTGAATCGAAACTAGGATCAAAGACTGCCAGTCCAACTTATGGACGTGAACCAAGCATTggccaatttaatttaaacgatTCCAATCGAGCATCTTTGCGTTCTGTCAAATCGCTTCAGCCAATATCTTTGCCAAACTCTCCGGAAAAAAAAGCCCAAAAAGTTGGAAAGCCAGTAGGACGTAGTGTAAGCAGTGTGTCAGGCAAACGTCCTGCTCACTTAAGTGCTAATGTTATACACATTCCCCTTAAGGGTGAAAGTTTTAATAGTTTGCCTCCCAACGAGGAATATTCACATGCAAGTACTCTAACACTTAGCAACACATTAGATCGCAAAACAGTGTCAGCTCTTCAATTGGCTGACATACCGATTAGCGATGGCAACATGGAATTAGTAGCCATAGCAGATCGGCAAAGCTTGCGCAACCTTTGCGAAGGTGAATTCAATGTCCAACTCGATCCTAATGTCGATCTAACAGAGGCCGAGCATTTTGCCTTGTACACCAGCATACCACCACACGCAACGGTTAGTGAATTTGATGAAACATCGGCATACTATGCCCCTGTCGATGCTGGCGAGATTTTAACGCCGGAAGAAGTGGCAGAACGTTTAGTAGCAGCgaatagtttaaattaa
- Protein Sequence
- MYQNPGNNNVLAGEGEPVDGDCGLTANNPNAQIMDSIQQQQQQQQQQQKQQNINYNGMPSQQQATNNGKNVRKRPYVKITEQPAGKALRFRYECEGRSAGSIPGVNSTAENKTYPTIEIVGYKGRAVVVVSCVTKDQPHRPHPHNLVGKEGCKKGVCTLEINSETMRAVFSNLGIQCVKKKDIEAALKAREEIRVDPFKTGFTHRFQPSSIDLNSVRLCFQVFMESDQKGRFTQPLPPVVSEPIYDKKAMSDLVICRLCSCSATVLGNTQIILLCEKVVKEDITVRFYEENNGQIIWEAFGEFQITDVHKQTAIAFKTPRYRKIDITEPAKVLIQLKRPSDGVTSEALPFEYVPLDTGRKRFLDLRRNLKRKPDLDIFQEILCTEIKEQVCNDESEVIDLDAPTIEELPEPKYFQPQDETVLTSTKDTTNNYDEEVKRRSEEEIDLIIDEKMRELEQQHHKQSAEDQNASLREIAEVFNASQQNDKDQENQTVVMYTNEKITEWMNSNKLLELKNPTFNESIETNSSTTTVNTQVPANDLEDKTLNDLLEQVAELDGIYSDHVIRRDTYNSTLINELNGIDSCVPTTDGTLVDGGQTAMEVEEQFDDTATYSSLQIAFKNPIFLPMSDIMPLTPPASNLKADFESDDYDPIEVRTSPTSTTSSPPAAVVSMQNPDIIAQSQSQLQAPPRPAPPQANSPQMHVTAAEEEKLPPLPPKRLRKQDSNAENRSIEANIGDTLDRKSRQQTPIIIMKTPDQSPPTKRLPQKPGSSSTLSKQKKPGFFSKLFSRRKSKSDLSQSGDQTVESKLGSKTASPTYGREPSIGQFNLNDSNRASLRSVKSLQPISLPNSPEKKAQKVGKPVGRSVSSVSGKRPAHLSANVIHIPLKGESFNSLPPNEEYSHASTLTLSNTLDRKTVSALQLADIPISDGNMELVAIADRQSLRNLCEGEFNVQLDPNVDLTEAEHFALYTSIPPHATVSEFDETSAYYAPVDAGEILTPEEVAERLVAANSLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01260765;
- 90% Identity
- -
- 80% Identity
- -