GBI_01977-RC
Basic Information
- Insect
- Gryllus bimaculatus
- Gene Symbol
- lov
- Assembly
- GCA_017312745.1
- Location
- Scaffold8:9386364-9390697[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3e-15 3.2e-13 50.5 0.1 4 101 22 112 19 121 0.88 2 3 1.1e-20 1.2e-18 67.9 0.0 5 104 145 244 142 247 0.90 3 3 8e-12 8.6e-10 39.4 0.8 3 85 278 357 276 369 0.82
Sequence Information
- Coding Sequence
- ATGGATATTGTTAAAATACAGCAGAGAGATCATGTGGATGAAGTGATGACAACACTGAAATATTTTGCCAAGGCTGGTATTGCAACTGATCTTGCTCTGATGGCAGGAAGTGAACCACTTCACTTACATCAGTTAGTACTTTCATGCTTCAGCAATTATTTTGAATCTCTCTCAGAGGAGAATGTAAAGTATATTATAAATGCTGATGTAAGAAAAACTGTACTTGAAGCCTTAATTGATTATATTTATAAAGGCATAGCAAACATTTCACAAAGATACAAAAAACAGTTGTTACTCACAGCTAGCTCTCTTCAAATTGAAGGTCTTGGTGCAATCAATTCACATGATTTTGAATCATCTAGCAAGAATGATCAAGCAACTATTATATGCCCAAATCACAAATTACATTTATCTCAGAAGATTTGGGATGCTCGTCAAAATCCATCCAAAACTGATGTGGTGTTCATCGTTAACAACAAACACAAAGTTTTTGCACATGCATGTATTTTGAGTGCCTGCAGCCCATTTCTTCTTCAAGTATTTACTGGACATTGTGCTGAGAAGAGGAAGCCTTATATTGTGGCCTTACGTAATATCAGAAAGGATGACTTAGAATTTGTTTTACAATTCTGTTACAAAGGAGAAGTTCACATTCCTTCACAAGACATTGAGTCAGTGTATAAAGTAGCTGACCTCCTAGGTATAGACACACTTAGTAAGCTACTTTCGGCCAAGATGCCTATTTACGAAGTTGTAAAAGTGCCTGAAAAGGAGATAGAAGGATGTTCAACCAATATAATTAGCTCATCTCTGAAACCAGCCGCTTTAGCAGAGTTGTTGAGATATGAAAGAATGGTAGATGTGTATATATTTTGCAAACAAAAAATTTTTAAAGCACATAGTGTCATATTGAGTATTTACAGTATTTTCTTCAAAGAGTTGGCAATTTTCCTTAATTATAATTTGAAAGATGTTGTTGTTTTGATGGAGAGTTTTAATTCTAACAACATACAAACTTTACTTGAATATATCTATGTTGGAGAAGCAAAATTTGAAGGTGATATGGAAGAATTTAAAGCAAACATGTCAGAATGGTTAGATTTAAACATTCTTCCAGTTTCTCCAGATGTAGCTCCCCGAATATTTACTTCCTTGAAATCCTCTAACAAGGAGGGTGAAACTAAAATAGACTCTGCTGTTTGCAATGACACAGTATTAAAACCAAAGACTGAGAGCAGAAGGTTTGTGAAAGATGGAAAAAGTAAAGACGATGAATGTAAGGAAAGCTCGGAAAAAGAAGAGTTCATAAGTAATAAAACTGTTCATGTAAAGGAAGAGTTGAATATTACTGAATCCGATGCCATTAATAAAAAACACTTTCCAATATCAAAGCATCAAAATAAACAAACCTTGTATACAATAAAATGTAATTCTCATGATTGTGATGAAAATGTACCTGAAGATGTTAGAGAGAAAATGGAAAATAGATATCATAGAATAAACAGTAATGATAAATTAAATGCTTCCAGAATTAAATGCATTCCAGGAAGATACATGCACGCAAAAGTGGAAATAAAAAATGAATTGGTTGATTTAGAATGTGCACATAATAGCTTTGAAAAAGAAAACAATATGATAGGAGAGACACATGTCCCAATGAAATGTGAAGATGATTTGAACAAAAAGGAAAATATGAAAAATAAAACATATGCCCAACTTGTAAACAAACAAATTGTATCTGGAAATAATGTTCATGAAAATACCATAAGTTTAAGATCTGAGAAAGAAGATAGTGAAATTGATGATCCAGAAAAATTAGAATCTGTAATTAAAAGTTCATCTGATGAATTAAATGACATTAAGAAAAATAATCCACATGTTATGGCAAAGAAGCATAAACAACGTACCTTTGAATGTCAGACATGCAATTCAAAATTCACAGCACGTTGGGAATTCAAGTTACATCTTTTAGATCACCCAGATGGCAATGTTCGGCAGTGCAAACTCTGTCTAAAGGAGTTCAGTAGACCTAGTGAATTGCAAAATCATCTTCGAACTCATACGGGTGCCAGGCCTATGCAGTGTGAGACATGTGGGATGTGTTTCATAAGCAAAAACACCCTGCGGAAACATGAACACACACACACTAAAAAGAAAACTAGTGAATTTGAATGTGAGGTTTGCAAAAAAACATTTTCTCGCAAGCAGTACCTTCAGGAGCACAAACGAACCCATTCTGGCAGTAAGCCATATGAGTGTGATGTCTGTCACAAGAGTTTCGTTGGTAAAACAGGTCTGAACCATCACAAGAAAATACACAAGAGTGCTGATGAGAAGAAGAGTGCCATGTGCGACATTTGTGGGAAGAGTTTCACACGACATGCTCTTTGGACTCACATAAAACTTCACAACAAAGAACAGAAGCCATCTTTTGCTTCGGTTAGTTCAAATATGCCCGAAGGCCAAAATTATGTTAGTGAGCCAGATCCGACTGAAATGCTCAACAATGCACCATTATCTGGCACTCTGACAGACGGAGGTAATGATAGTATGTGTTTAAATATATCTGAGAAGACTGCAGATGACATCAACTTACTCCAGCTGAAGCCTGTTGAGGAGGCTTACCTCAACCAACCAACATTGCAGAATGAGGAAGTGGAATTTCCAAGCATGCAAACCATGGATACAAGCTCCATGAATAATTTGACTGTAGGAAAAGCTCCTGATATGACCACCCTATCCCGTCGACCTTACAGTATCACAATTGATGGAAATCTATGTTACAATACTACTTTATCAACAGATGGAGACATTACACCTTCCATCACCTTGCTTCCTGAAAGAACAGATTTAGAGATCTCAGACATGGATGTTCTATTGCCAGTAACACATCCCACTAAATTCAATGTAAGTGAACTGAACAGAGTAACTGGAACTCAG
- Protein Sequence
- MDIVKIQQRDHVDEVMTTLKYFAKAGIATDLALMAGSEPLHLHQLVLSCFSNYFESLSEENVKYIINADVRKTVLEALIDYIYKGIANISQRYKKQLLLTASSLQIEGLGAINSHDFESSSKNDQATIICPNHKLHLSQKIWDARQNPSKTDVVFIVNNKHKVFAHACILSACSPFLLQVFTGHCAEKRKPYIVALRNIRKDDLEFVLQFCYKGEVHIPSQDIESVYKVADLLGIDTLSKLLSAKMPIYEVVKVPEKEIEGCSTNIISSSLKPAALAELLRYERMVDVYIFCKQKIFKAHSVILSIYSIFFKELAIFLNYNLKDVVVLMESFNSNNIQTLLEYIYVGEAKFEGDMEEFKANMSEWLDLNILPVSPDVAPRIFTSLKSSNKEGETKIDSAVCNDTVLKPKTESRRFVKDGKSKDDECKESSEKEEFISNKTVHVKEELNITESDAINKKHFPISKHQNKQTLYTIKCNSHDCDENVPEDVREKMENRYHRINSNDKLNASRIKCIPGRYMHAKVEIKNELVDLECAHNSFEKENNMIGETHVPMKCEDDLNKKENMKNKTYAQLVNKQIVSGNNVHENTISLRSEKEDSEIDDPEKLESVIKSSSDELNDIKKNNPHVMAKKHKQRTFECQTCNSKFTARWEFKLHLLDHPDGNVRQCKLCLKEFSRPSELQNHLRTHTGARPMQCETCGMCFISKNTLRKHEHTHTKKKTSEFECEVCKKTFSRKQYLQEHKRTHSGSKPYECDVCHKSFVGKTGLNHHKKIHKSADEKKSAMCDICGKSFTRHALWTHIKLHNKEQKPSFASVSSNMPEGQNYVSEPDPTEMLNNAPLSGTLTDGGNDSMCLNISEKTADDINLLQLKPVEEAYLNQPTLQNEEVEFPSMQTMDTSSMNNLTVGKAPDMTTLSRRPYSITIDGNLCYNTTLSTDGDITPSITLLPERTDLEISDMDVLLPVTHPTKFNVSELNRVTGTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00759499;
- 90% Identity
- iTF_00759499;
- 80% Identity
- iTF_00759499;