GBI_04331-RD


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Gryllus bimaculatus
Gene Symbol
Hr39
Assembly
GCA_017312745.1
Location
Scaffold19:10829614-10931796[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.5 1.2e+04 -4.1 5.1 106 161 438 491 356 559 0.53
2 3 3.4e-08 0.00016 21.9 4.9 1 94 724 847 724 859 0.53
3 3 1.2e-64 5.7e-61 207.8 0.3 204 393 856 1040 852 1047 0.97

Sequence Information

Coding Sequence
ATGTCCCCTCTTGAAAATCCTCGTTCCTCAGTTGGAAATTTATATAATGAATCCCAGATTCGCTCCAGAAATGTAGTGGAGCGCATCTTTGGAATTTGGAAGAAGCGATTTCCTGTTCTCGCTCTAGGCATAAGATTAAAATTAAAAAAACATATTTCCTGTAATTGTGGCTACTACAGTGTGCGCCGCGGCACTGAAGAGGATGTGAGCGGAGCGCGGTCCAGCAGCAGCTCCCCAGCCGCAGCCGCAACCCCGCAGGACAACGGTCCGATGCATGCGCCACGCCCTGCGGGCGACCACCCGGCCACCACCCCCACTGGAAGCACCGGCTCCCCACGCGCCTCTGCTGGCATCTCTCGCGCCAGACGCACCGCCGCCTCCGGGAGCAGCATCAGCAGCAGCGAGGCAGGACCGGAGGAAGCGGGCGGCGTGGCGATGGGCCTGCGCCGTGCCGGCGACGCGCGACAGCATCCGTCTGCCGCCTTGTGCAGTAGTCGGCCCGCGTGCGGTGGATCCGGCCTGGGGCCGGGGCCCGGCCCTGGATCGGGCCCTGGCCCTGGCCCCGGGCCGGGGGCCGGCCCGGCGCACGCTCGGAGCCTGGGCGACCTGTCTGCCAAAGTGACGCTGGGGGAGCGCGGGGCGACGGTGGTGTCGGCGGCGTCCGGGGCCGTCACCGTGATAAATGTGCAGCACGGTGGCAGCAAGCCAGTGACGGACACTGCCCTCGCGGATGAGGAAAGTGCTGTAATGCAGCATCATCATCTGCAGCTCACTAATAAACCTGATCTGGCTGTGACAGCCAATGGTGTAGTTAATACCATGCCCTGTGAGGATGATGACGAAGAGGATGAAGATCTTTCAGGGTCAGATGGGGAAGTGAGCAAAATTGATTTCACAGGTGTAAATTTAAGAAATAAAAAGAAGAGAGTTGTTGGAGAAGATTCCCAAGATGGCTTTGAAGAACCTGAACGTCCAATGTCTTGGGAAGGAGAGTTGTCTGATGCTGAAATGAGCATCATTACAAGCAATATTAACAAGGACCATGAAGAAACGTCAATGGAAGGAGTGCAGATATGTGGGGTCAACTCCATTCATGAGCATGGAGATGATAAACCTCATACATTTGAAGAAGCTGCGGTGGAAATGCGATCCTCCAAGCAGTTACCTCATCAGCCATTGGTAACAAATGCTGGAATTCCTACAATGGGGACAGGAACTTCTGGGGCTACAGCTTCTGTGGCCAGTGAGCTGCCTCTGTTAGTGGATAAACTTTTGGGCTATGGAAACACAACCCCTTCCCATAGCCCAGTTCTTCAGCAGAGGCATTCTCATGCCCTCAACACGAAGGCTCAACCGCTGCCTCCTTCACAGGCTGTTCCTCCAACACCTTCCCCAGATTCAGCTATTCATTCAGCTTATTCATACTCATCTCCTGCTCAAAGTCCTGTTATTTCACGTCATGGAAGCAGCCATGGCTTGCCATCATCAGGATTCAGTTCACCCTACACTCCTTCACTGTCACGTAACAACTCTGATGCTTCTCAGTATGGAGGTTCCCAGCACAGTAGTTGCTACAGTTACAGTTCCGTATCAGTATCACCCACCCAGTTTTCACCAACTCATTCACCCATCCAGTCCAGACACATCCATGGTGGACCTCCTGCTGGTTTCCCTTCTCCAGTGATGCCTCGTGGTGCAGCTCCAGACTTTGCCTCCTCCGGTTCAGTCAGTTCTCCACTTCATATGATGGCAGGTGGAGTACTATATGGAGGTGTTGCGTTGCCGAGAGGCACAGTTGTTCCTGTTGATGAACAGGATGGTTCATCCACGGATGCTAATGATGATCGGGACAGTAATAGTATTCTGGATGACAAAATGTCTTCCTTAGCAGCAGATTTGGTCCAGCACTCAAATTTAGCTGCCCCTCCTGGAATTTCAAGACAACAACTTATCAACAGTCCGTGTCCAATATGTGGTGATAAGATCTCAGGCTTTCATTATGGAATATTTTCATGTGAAAGCTGCAAGGGCTTTTTTAAAAGAACTGTGCAGAACCGTAAGAACTATGTTTGCCTTCGTGGATCTTCCTGCCCCGTGACCATTGCAACAAGAAAAAAATGCCCAGCTTGCCGATTTGAAAAGTGCCTCAAGATGGGTATGAAACTTGAAGCAATTCGGGAAGATCGTACACGAGGGGGTCGCAGCACATATCAGTGTTCGTATACCTTACCTGCCAGCCTTGTTGCACCAGCAGGTGATGTGTCGAACCACAAGCTTCTTGCTTCCTCTGGTGATCCCCAGGTCAAGCTGGAGGCTCCAGATGTGGGAGCAGTTGCTGGCAGTAGTGCAGCAAGTGGCATAGCCTCTAACAGTCGGCACTCGGACAAAGCCATACCACAATTATTGCAGGATATTATGGATGTGGAACATTTGTGGTATTACAATGATCAGGAAATTCAAAAACTTGCTGGTCACAATGGCAATAACAGTAGTAGCAGTAGTAGCAGCAGCAGTAGCAGTAGTAGCTGTAGCAGTAGCAGCAGTACCAGTACGAGTTCCAGTGCCAACAATAACCCAGACTTCATTTCCAATCTTTGTAATATTGCTGATCATCGGTTGTATAGACTAGTTAAATGGTGCAAAAGCCTTCCTTTATTTAAAAATATTTCGATTGATGATCAGATCTCACTGCTAATAAATGCCTGGTGCGAATTGCTACTATTCTCGTGCTGCTTCCGATCTATGTCTTCACCAGGGGAAATCAGAGTGAGCTTGGGGAAATCTATCAGCCTTTCTCAAGCTCGTGAAATGGGTCTTGGTGCATGCATAGAGCGTATGCTAAATTTCACTGAACATCTGCGTCGATTGCGTGTAGACAAGTACGAATATGTTGCCATGAAAGTCATCGTATTACTTACATCAGATGCAAATGATTTGAAAGAATCAGAGAAAGTTCGTGCTTCGCAGGAGAAAGCTCTTCAGGCCTTACAACACTACACTCTGTCCCATTATCCAGATATACCTTCCAAATTTGGAGAACTTCTTTTAAGAATTCCTGAATTGCAAAGAACTTGCCAAGTTGGAAAGGAAATGCTGTCTGTTAAAAATAAAGAAGGAGAAGAGGGGACCATTAAATTGTGCCACAAGAACCTGTGTAGCTTATGGTGGTGGTGGTATCCTGTGCTCATTTTCAATTCTGTCTTATTGGAAAAATTAAATGAAGAGAATCCTAATATTGACTGA
Protein Sequence
MSPLENPRSSVGNLYNESQIRSRNVVERIFGIWKKRFPVLALGIRLKLKKHISCNCGYYSVRRGTEEDVSGARSSSSSPAAAATPQDNGPMHAPRPAGDHPATTPTGSTGSPRASAGISRARRTAASGSSISSSEAGPEEAGGVAMGLRRAGDARQHPSAALCSSRPACGGSGLGPGPGPGSGPGPGPGPGAGPAHARSLGDLSAKVTLGERGATVVSAASGAVTVINVQHGGSKPVTDTALADEESAVMQHHHLQLTNKPDLAVTANGVVNTMPCEDDDEEDEDLSGSDGEVSKIDFTGVNLRNKKKRVVGEDSQDGFEEPERPMSWEGELSDAEMSIITSNINKDHEETSMEGVQICGVNSIHEHGDDKPHTFEEAAVEMRSSKQLPHQPLVTNAGIPTMGTGTSGATASVASELPLLVDKLLGYGNTTPSHSPVLQQRHSHALNTKAQPLPPSQAVPPTPSPDSAIHSAYSYSSPAQSPVISRHGSSHGLPSSGFSSPYTPSLSRNNSDASQYGGSQHSSCYSYSSVSVSPTQFSPTHSPIQSRHIHGGPPAGFPSPVMPRGAAPDFASSGSVSSPLHMMAGGVLYGGVALPRGTVVPVDEQDGSSTDANDDRDSNSILDDKMSSLAADLVQHSNLAAPPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGSSCPVTIATRKKCPACRFEKCLKMGMKLEAIREDRTRGGRSTYQCSYTLPASLVAPAGDVSNHKLLASSGDPQVKLEAPDVGAVAGSSAASGIASNSRHSDKAIPQLLQDIMDVEHLWYYNDQEIQKLAGHNGNNSSSSSSSSSSSSSCSSSSSTSTSSSANNNPDFISNLCNIADHRLYRLVKWCKSLPLFKNISIDDQISLLINAWCELLLFSCCFRSMSSPGEIRVSLGKSISLSQAREMGLGACIERMLNFTEHLRRLRVDKYEYVAMKVIVLLTSDANDLKESEKVRASQEKALQALQHYTLSHYPDIPSKFGELLLRIPELQRTCQVGKEMLSVKNKEGEEGTIKLCHKNLCSLWWWWYPVLIFNSVLLEKLNEENPNID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00759330;
90% Identity
iTF_00759330;
80% Identity
iTF_00759330;