Geve009486.1
Basic Information
- Insect
- Graphium evemon
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_025774375.1
- Location
- JAOPJC011168340.1:786-2046[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-22 2.3e-18 66.1 4.5 190 299 38 146 25 147 0.90 2 2 0.00026 1.7 7.4 0.8 124 171 166 213 150 244 0.58
Sequence Information
- Coding Sequence
- ATGAAATCAAATAGCGAAGTACACTTAGAAGTTAAACAATTTATAATCAATTTTGGGAGATGGTCTGCGATTCTTTTTCTAAAAAGATATAATAAATTAAACGGAGAAGATGATGATGAAGAAGTTTCACTTTTTCTGGCTAATAACATCTCATTAATTAGTAAAGAAGCTGCAACTATGCTTGAAGATATTCCCGGCAATACTCTCGAAGCAAAGTTAGTGGCGATCTTTGGTGAAAACCGTAAAATGGCCTCGACTATTAAAGAATTAACTTCAGAGTTGGAAGAAGAGCGGCAACGGTTTCAATCATTGAATGATTCCTTAACAACTAACTCGGTGCATTTAACAAGTGAGATGCAAGCTGAAATTcaacGTGAAGCTAACAAAATGACCAATGATCTACGGTACAAGTTGAAGAAAAGCGAACAGGAGGTTGCAGCATTAAGTACCAGTGTGGCGCGGCTCGAGACTCAGGTAGCAAGATTCAAAACTGCTACTGAAGAAGCCGAGAAGCTCGAAGAGGAACTCAAATCGGATAAACGGAAAGCACAACGCGAGCTTCGAGAAGCACAAACTCGAATCGATGAGCTCGAATCAGCAAATGCACATCTTCAAAAGCGGATTGACAAGCTCAAATCGAACCGAAATATTTTGGGTATCATAGCAAATGCCAGTTCAGCTTGTAACTCGAGCCCGAGCACACCATCAGTGGAGGCGTCTGTCTCGAGCACACCTTTAGGTGCCACACCTACGCCTCCCCCTTCAACTTGTTCCGATACTAGCACGATATGCTCTACCACTTCTACTTTCACCGAT
- Protein Sequence
- MKSNSEVHLEVKQFIINFGRWSAILFLKRYNKLNGEDDDEEVSLFLANNISLISKEAATMLEDIPGNTLEAKLVAIFGENRKMASTIKELTSELEEERQRFQSLNDSLTTNSVHLTSEMQAEIQREANKMTNDLRYKLKKSEQEVAALSTSVARLETQVARFKTATEEAEKLEEELKSDKRKAQRELREAQTRIDELESANAHLQKRIDKLKSNRNILGIIANASSACNSSPSTPSVEASVSSTPLGATPTPPPSTCSDTSTICSTTSTFTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -