Gfla007403.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Gortyna flavago
Gene Symbol
-
Assembly
GCA_963669345.1
Location
OY770131.1:4785790-4788255[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.4e-08 1.8e-05 25.1 0.0 2 36 9 43 8 47 0.90

Sequence Information

Coding Sequence
atggCACCCAAACGAGATTATTCTAAAGAACAGATGATTAGAGCAATTGAAGATGTACGAAGAGGAGAAAAGGTATCTGTAGCAGCTACCAAATATGGTGTCCCCAGAATAACATTAAGAAACAAAGTTATGGGGATAAGCCCGCTGGACTGCAACTTAGGGCCTTCCACAGTTCTGTGCcaagaagaagaaaaattatTGGTCAAATGGGTTTTATTCATGGCTGAAAACCATTTCCCAGTCACAAAGGACCACTTGTTAGACAGTgtccaaaaaattattttggaaaaaaaaatggacaatTGCCCGTTCACAAATAATCGCCCAGGAAAAAAATGGTTCAGTTCGTTTTTGAGCCGTCATCCAGAATTGGCGCAAAGAACGGCACAAAATTTGACAAAGGCCAGAGAAGACGTAACTGAAGAAGAGTTGAACCAATGGTTTCAAACAATAAAGACTTACATAGAAGGTAAGGGGTTGTCAGATGCACTAAAAGACCCTACAAGGATATACAACACCGATGAAAGTGCTTTCTACTTGCAGCCTAAAGCAGGCAGAGTACTAGTACGGAAAGgagaaaaaaacgtttatagTTCCTCTGGCGATGAGAAAGAAAACTTAACAGTATTAATTACTGCCAATGCTGCAGGAGTTATAGCTCCGCCTATGATTGTGTATCCCTATGAGAGAATACCGACACTCATTGTCAAGAGTGTGCCTAGTGGATGGGGCATAGGGCGGTCGGAAACAGGATGGATGTGTGCAAAGACATTTTACGAATTTATCACCAATGTTTTTAACCCATGGCTTATACAAAAAGGGATACCAAAAccggtaattttttttctggacGGGCATAAGTCCCACATGTCGTTGCACCTTGCAAACTTTTGCAGAGATAATGGCATAGAGTTAATTGCACTTTTCCCCAATTCCACTCACTTAATCCAACCGATGGACGTGGCGGTCTTTCGGGCACTCAAAATTGCCTGGAGAGTTCAGGTCATGAAGTGGAAGTCTGAAAATCCAGGCGCACGTTTGAAAAAGGAAGATTTCGCACAAAATTTGCAAGGGGCTTTAAAAAGTATTTGCCCTGAAACCATAAAAAACGGTTTTCGTAAAAGTGGCCTTTACCCATTTAGCTCGGAATATGTGGATATGACCAAAATTGGTTCCCGCAATCGCACTATCAGATCTCAACCACTCCAGACAGAAGATACGATTAAAAAAACCCAATTTATGCAAACTTTAGAAGCAGAGATACAGAAAGTGTTTTCATCAGAAAAAATTACTCTTTTCAACAAACTGTACTTCATGCCTAGAAATGAAGTAGATAATCTACTGCCTGATGAAGATCAATCTCTTTATATTATATGGGCTAAAACCAAAaacattttgactgaaacactTCCAATTTCAGAAGATAGTGACAATAATATGACGTGCCAACAGCCATCCCAGACAATTGAAACGGAATATGATCTGATAACATCTGTTGTATCAAAAGATTTACCACAAGTTACAGCTGAATATGACCTGACAACATCCGTTCTATCAAAAGATGTACCACAAATTACAGATGATTCTAACGCGGCTACGGCTACATCTACAGGAACACCAGATTTATCAACACCACCGCTTAGAACTCATCAAACCCCCAGTGTGCCGCCTACTACTGATGATTTCAACGCGGTTGCCACAACCACGTCCTGTACACCGCTTAAAACAAGTTTAACTTCCAAATTATCCACATCTACAACTACGCCAATTGGTGATGTTCCCTCACCTTTTAAACGAGCCTTGTACTGGCCCGAACCAGAAATTAAAAAACGCCGTATCAAGGAACGACTGCCGTCGGCCATCACAAGTGACCCGTACATAGAATAcgtagaaaaaaaagaaaatgaaaagaaacaaaagatagaagaaaaagaaaaacgtgcaaaagaaagaaaagaaaaacaattattacgAGAAAAACTAAagcaagaaaagaaaataaacaaggaAAGTAAGAGTGGCAAAGCAAAGACCAAAACAGCAAAGTCAACAAAGAGGAAACAAATATCAAGTTCATCATCGGAGGAAAATACCACTGATGTTGAATATCAAGATAGTGAATATGATTTAGAAGAAGACCTGTCTGAATCTGGATCTGAAGAAGATAAAATATCTTTGAAAACATTAGCACTGTCACAGAAGAGGGAAAGGAAAAGCAAATACGTAATAATAAGGTATGAAGGAGAATATTTTCCTGGAATTATTAAGAAAGCTGAGGGTAATCAATATGAAATAGGCACAATGGTGTTATCTAAAAGTAATACATTTCGTTGGCCAGAAACCCCAGACCAAATATGGTACGATGAGAAAGCAATAATAGAATTTATTAAAGAGCcagtacaaataaacaaacgtgGATTTTATAAAGTAGAAGAAATGAACAAATATTTACCGTTCGTcttataa
Protein Sequence
MAPKRDYSKEQMIRAIEDVRRGEKVSVAATKYGVPRITLRNKVMGISPLDCNLGPSTVLCQEEEKLLVKWVLFMAENHFPVTKDHLLDSVQKIILEKKMDNCPFTNNRPGKKWFSSFLSRHPELAQRTAQNLTKAREDVTEEELNQWFQTIKTYIEGKGLSDALKDPTRIYNTDESAFYLQPKAGRVLVRKGEKNVYSSSGDEKENLTVLITANAAGVIAPPMIVYPYERIPTLIVKSVPSGWGIGRSETGWMCAKTFYEFITNVFNPWLIQKGIPKPVIFFLDGHKSHMSLHLANFCRDNGIELIALFPNSTHLIQPMDVAVFRALKIAWRVQVMKWKSENPGARLKKEDFAQNLQGALKSICPETIKNGFRKSGLYPFSSEYVDMTKIGSRNRTIRSQPLQTEDTIKKTQFMQTLEAEIQKVFSSEKITLFNKLYFMPRNEVDNLLPDEDQSLYIIWAKTKNILTETLPISEDSDNNMTCQQPSQTIETEYDLITSVVSKDLPQVTAEYDLTTSVLSKDVPQITDDSNAATATSTGTPDLSTPPLRTHQTPSVPPTTDDFNAVATTTSCTPLKTSLTSKLSTSTTTPIGDVPSPFKRALYWPEPEIKKRRIKERLPSAITSDPYIEYVEKKENEKKQKIEEKEKRAKERKEKQLLREKLKQEKKINKESKSGKAKTKTAKSTKRKQISSSSSEENTTDVEYQDSEYDLEEDLSESGSEEDKISLKTLALSQKRERKSKYVIIRYEGEYFPGIIKKAEGNQYEIGTMVLSKSNTFRWPETPDQIWYDEKAIIEFIKEPVQINKRGFYKVEEMNKYLPFVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01531946;
90% Identity
iTF_00758098; iTF_00758099; iTF_01093982; iTF_00449028; iTF_01246799; iTF_01246798;
80% Identity
iTF_00758098;