Gfla012456.2
Basic Information
- Insect
- Gortyna flavago
- Gene Symbol
- -
- Assembly
- GCA_963669345.1
- Location
- OY770136.1:2412604-2414421[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.6e-09 5.1e-06 26.9 0.1 4 43 17 56 14 58 0.88
Sequence Information
- Coding Sequence
- ATGGCGCCATACATTCGTAAAACGACAAGGCAAAGTTGGGATGAAATAAATATGAGAGACGCAATTGCAGCTGTTCGTAGCCAGAGAATGGGTTGGCAGATGGCAGCAAAGGCATACCACGTTCCCGCTACTACTCTCCGACGTCGAGCAGAAAAAGGAGAAACGTCTAAAGGGTATTTAGGTGGTCACAAAACTACATTTAATACAGAACTCGAAAGACAAATTATTGCGCATTTACAAGAGCTAGAGGTGCGTTTTTTTGGAATGACAAGGACTGATTTAAGAAAACTTGCTTATCAAGTAGCTGTTGCTAAGAAACTTCCCCATAGATTTTCCTCGGAAAATGAAATGGCAGGTTTGGACTGGCTGCGAGGCTTTAGGAAACGGAATCCGTCCATATCTCTTCGAATACCCGAAGCCACATCGGCAGCCAGAGCTCGGGGATTCAACAAAGTCCaggtaaaaacattttttaaattgttggtTGATGTAATGGAATTGCACAACTTTGAACCCCATCAAATTTGGAATGTTGATGAATCCGGGTTTAGCACAGTGCCATCCCAAAACCCGAAAGTCTTTGCGACAAAAGGTAGAAAACAAGTTGGGGTATTAACCAGTGCTGAAAGAGGCCAACATTATACTACGGTTTGCTGCGTTAATGCCCTGGGAAGCTTCATACCTCCTGCATTCATTTTCCCTCGCAAAAATATGAAAGCAGAACTTATGGACCACGCTCCTGCCGGCGCTGTTGGATTTGCCCAAGATAAAGGATGGATGAATGGGGAGGTATTCCTTAAGTGGTTGCAGCATTTTGCTAAATATGCAAAACCGTCGAAAGAAGCCAAGATTCTGTTACTTTTAGATGGACACTCCAGTCACAAAAATTTGGACGTATTGACTTATGCAAAAGATAACGGAATCATCCTATTCTGTTTCCCCCCACATTGCACACATAAAATGCAACCACTTGATGTTAGCTTCTTCGGCCCAATTAATACATTCTacaatcaagagctgcatatttGGTTGAGGAACCATCCAGGACGAACAGTTACACATTTCCAGGTGGCAGAGCTGTTCAAGCAAGCTTATCTTCGAGCAGCAACGGTTAGCAATGGTCAAAATGGATTTGCTGCAAGCGGCATTTACCCCCTGAATGAGAATATTTTCCCAGAGTGGATGTTTGCGCCTGCAGATGTCACTGACAATGATCTTGGAGATTCTTCTGTACCCATCTTGCCAGACAATGCCAGAAATCAGGAGTCTCAGGATCTCCAGCTGAACAACCACGGCGAGGCGCCACCTTTAGATGCCCAGACCTCCCGCCCGAACGATCAAACTGAGGAAGAGCCTCCAGTACCTCAGTTAAATGACGACACTATGGCAGGGCCTCCAGTGCCTACGAGCTCCCACGATCAAATTCAGTCAAGTCTAACAATAGCAGATATTTCACCTTTGCCTAAATCTTCACAAATAAAACGGACTGTTCATAAGAAAGGTAAATTCGGGATGCTGAATGCATCACCAGACATAGCATTACTAAAGGCTGTCGTTGCTGAAAAAGAAGCAGCCAATATGAGAAAATCTGCCCGACAAGTTAAGAAAAGAATCGTGTTGGCAGTTTCCAGTGATGAGGAAGAACCGGTCGCCTCAGACGATGAAGACCCATCCTGCATATATTGCAATGAGCCCTGGAGTCATTCTCGCTCCAGGGAGTGGTGGCTTCAATGTCAAGTCTGTCGCCAGTGGTGCCACGCAGAATGCATTGGGTTACCAAAAACGGCTAAAAATGTAATCTGCGatgtttgcaaataa
- Protein Sequence
- MAPYIRKTTRQSWDEINMRDAIAAVRSQRMGWQMAAKAYHVPATTLRRRAEKGETSKGYLGGHKTTFNTELERQIIAHLQELEVRFFGMTRTDLRKLAYQVAVAKKLPHRFSSENEMAGLDWLRGFRKRNPSISLRIPEATSAARARGFNKVQVKTFFKLLVDVMELHNFEPHQIWNVDESGFSTVPSQNPKVFATKGRKQVGVLTSAERGQHYTTVCCVNALGSFIPPAFIFPRKNMKAELMDHAPAGAVGFAQDKGWMNGEVFLKWLQHFAKYAKPSKEAKILLLLDGHSSHKNLDVLTYAKDNGIILFCFPPHCTHKMQPLDVSFFGPINTFYNQELHIWLRNHPGRTVTHFQVAELFKQAYLRAATVSNGQNGFAASGIYPLNENIFPEWMFAPADVTDNDLGDSSVPILPDNARNQESQDLQLNNHGEAPPLDAQTSRPNDQTEEEPPVPQLNDDTMAGPPVPTSSHDQIQSSLTIADISPLPKSSQIKRTVHKKGKFGMLNASPDIALLKAVVAEKEAANMRKSARQVKKRIVLAVSSDEEEPVASDDEDPSCIYCNEPWSHSRSREWWLQCQVCRQWCHAECIGLPKTAKNVICDVCK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00373907;
- 90% Identity
- iTF_00850612;
- 80% Identity
- -