Gfla007130.1
Basic Information
- Insect
- Gortyna flavago
- Gene Symbol
- -
- Assembly
- GCA_963669345.1
- Location
- OY770130.1:20472188-20474293[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-09 2.6e-06 27.8 0.0 2 40 16 54 15 57 0.92
Sequence Information
- Coding Sequence
- ATGGTgcgaaattatctaaaaaaaaaaggtccgcCCAAATACTCTGAAGAAAAAGTACAAAGAGCTCTTGATGAGATAAAAGCTGGTACGATATCTATACACAAGGCATCCGTTCTTTACGGACTTCCATTTGCAACGTTGTATTGCCGAAACAAGGGAACTCGAGGtgctataaaaaaatgtaagggACGCAGAACTGCACTTTCCGAAAATATTGAAAACGTTTTGGCAACATCAGTTAAAACACTGGCTAAATGGGGGTTTGGTCTTAGTCGAAAGGAAATTATAGAGCTAGTAGGTCAGTACGTTGTCGTGAATAAAATCAAAACCCCATTTAAGGGAGGGATACCAGGGGAAGACTGGTTCCTTAATTTCAAAAAACGGCATAATTTGTCAATTCGAAAGCCAGAACCTTTGGAGTATGCGAGAAAAAAGGCTGCCACGGATCCATTCATCATCTATGGatattttaaccttttaaaaaaagttcTGGGGGAGCTAAACTTAGAAGACAAGCCCAAACAAATATGGAATTTGGACGAAAGCAGTCTCAGTATAGATCCATCAAAATCCAGAATAGTAGGAGAAAGAGGTGAAAGCTCATCCAGAGTTATCAGCACATCGGGAAGAGAGAACACGACTTTTGTGCTGGCTGCTAATGCTGCCGGCGGTCGAGCGCCACCTTTAATCATTTTCAAGGCAAAAAATATCTGGGACCAGTGGAAGGCACCACAAGGCAAGGAATATCCCGGTACAGCCTACGCTGCCACCCCGAACGGTTGGATGGAGACAGGGGTGTTTAAAAACTATTTCGAAAAAGTCCTCATACCAGCTCTGGGTGACGAACGGCCAGTATTGGTTATATACGATGGCCACTCCACACATGTGTCTCTCGACCTAGTTGAAACTGCTTTGGCCAAAGACATAACAATTCTTAAACTGCCAGCCCACACAAGTGACCAACTGCAACCACTAGACGTTTCGGTATTCAagtcttttaaacaaaaatgggaccaaacTGTTGCCACTTGGCAGCGACAGAATATCGGTCAAAAACTCCCTAAAGCGCTGTTCTCACAATTTTTGGGAGAGACTTGGATCAACGTCAGTGAAGATGTCATCATGAGTGGATTTAGAAAATCTGGGATATTTCCATTCAATTCTGACGTCATTCCAAGAGAAAATTTCTCTAGGGAGGCTTTAGAGCGCTGGGAGAAGCACCTTGCAGGGGAGCTTGCCCTCGCAAGCTCATCTCTCGATAATGAGGTGAGTCCTGATCCTCATCGGTCAAATAACTCATCACCATCGATTTTAAATCCACCAGCTTCCGAGGAGGAGGCTATTCCCACAACATCTGTATCGTCAATAATTGTCAATTCTCAATCGTCCCAGAATTCCATACCACCAACTCCTAATTCAAATGAGATACAAGCCTTTAACGCCGCGCCAACAATATCATTTGAACAGATGATTCTTGCAACTATACAGCAAAAACAGCTGcctgtaaataaacaaaagaaacgtAAGGTTGCCTCAGGTGCTGAAGTTGTTACGTCTGATAGAATGATGGAAGTGttaaaggaaaaagaaaaattaatcgcaaagaaaaaaactaaaataaacaagaaaaaagGTAAGAAAGAAGGAAAAGTGAACAAAAAAACTGAGGATTCCGAAGATGACAGTACAGATATAGGTTCAGATAATGAAGTGCATTATGCAAGTTCTGACGAAAGTGTATGGGTGGAAGAGGAAGCTGAAGGTTTTATTGAGACGGACAATGAAGCTGATATGACGGAaatgaataaagaaaataagacAGAAGAGGAGACTGGACTAGACATCAATATTGATAAATGGGTGATTGTCAAATATGCTTTGGTGAAAGGccataaatattatgtaggcaTCGTGCAAAAACCCATAGACAGTCGTTGGGAGGTCAAGTTTGTACGACGCAAAGGTGCAACCTTTGTATGGCCTATAATAGATGATGTTGATACAATCACCGCTGATTCCATCGTTAAAATATTGCCGAATCCTACGATAACCAAGCGCGGTATAATATACTTTGATTTCAAGTTCAGAAATATGATTATTTCATAG
- Protein Sequence
- MVRNYLKKKGPPKYSEEKVQRALDEIKAGTISIHKASVLYGLPFATLYCRNKGTRGAIKKCKGRRTALSENIENVLATSVKTLAKWGFGLSRKEIIELVGQYVVVNKIKTPFKGGIPGEDWFLNFKKRHNLSIRKPEPLEYARKKAATDPFIIYGYFNLLKKVLGELNLEDKPKQIWNLDESSLSIDPSKSRIVGERGESSSRVISTSGRENTTFVLAANAAGGRAPPLIIFKAKNIWDQWKAPQGKEYPGTAYAATPNGWMETGVFKNYFEKVLIPALGDERPVLVIYDGHSTHVSLDLVETALAKDITILKLPAHTSDQLQPLDVSVFKSFKQKWDQTVATWQRQNIGQKLPKALFSQFLGETWINVSEDVIMSGFRKSGIFPFNSDVIPRENFSREALERWEKHLAGELALASSSLDNEVSPDPHRSNNSSPSILNPPASEEEAIPTTSVSSIIVNSQSSQNSIPPTPNSNEIQAFNAAPTISFEQMILATIQQKQLPVNKQKKRKVASGAEVVTSDRMMEVLKEKEKLIAKKKTKINKKKGKKEGKVNKKTEDSEDDSTDIGSDNEVHYASSDESVWVEEEAEGFIETDNEADMTEMNKENKTEEETGLDINIDKWVIVKYALVKGHKYYVGIVQKPIDSRWEVKFVRRKGATFVWPIIDDVDTITADSIVKILPNPTITKRGIIYFDFKFRNMIIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00038658; iTF_00038659; iTF_00038660; iTF_00038661; iTF_00038662; iTF_00038677; iTF_00635335; iTF_00826809; iTF_01246774; iTF_00636319; iTF_00634292; iTF_00973697; iTF_01028201; iTF_01527028; iTF_01527025; iTF_01527029; iTF_01527030; iTF_01527031; iTF_01527032; iTF_01527033; iTF_01527034; iTF_01527035;
- 90% Identity
- -
- 80% Identity
- -