Ecan019307.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eilema caniola
Gene Symbol
CapaR
Assembly
GCA_949126895.1
Location
OX421465.1:28289925-28294875[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.4e-08 3.3e-05 25.2 0.0 1 39 148 186 148 190 0.91

Sequence Information

Coding Sequence
ATGTACGAGTTCTGCTTCCCGTACCAAGCTGCAGTGGTGGTCGCCTTCTTCGTGTGCTGGGCCCCTTTCCACTTCCAGCGCCTGTTCTTCATCTACGGGACCTCGTCTCCTCACTACCACGATATCAATGAATATCTGTTCTACGTGGCCGGAGCCTTCTACTACATCTCTGCTACTGTCAACCCGATACTGTATAATGTTATGAGCCACAGGTACAGGATCGCTTTCACAGAAACCCTCTGCTGCggcaaaataaaattgaagagcAGATATCGCGAGCACTCCAGTGTGAGGGAGACGACCGTGAACCATACCTCAGAGGGGGGTCATCTCGTGAGGGTTCGCTCCGAGATACAGGATAGGAGGAACAGGTATGTGTTTTTACAGATTACAGGCATTACGGTGCGAAATTATCTAAAAAAGAAAGGACCACCCAAATACTCAGAAGAAAAATTACAAAGAGCtcttaatgaaataaaagccGGTACGCTCACCATACACAAAGCGTCTGTTCTTTACGGAGTTCCATTTGCAATATTGTATTGCCGAAACAAGGGAACTCGAggagcaataaaaaaaagtaaaggaCGTAGAACTGCACTTCCCGAGAATGTTGAAAACGTTTTGGCAACATCTATTAAAACACTGGCTAAATGGGGCTTTGGTCTTAGTCGAAAAGAAATTATAGAGCTAGTAGGCCAGTACgttaatatgaataaaatcgaAACCCCATTTAAGAGAGGCATACCAGGGGAAGACTGGTTCCTTAATTTCAAAAAACGGCATCATTTGTCAATTCGAAAGCCAGAACCATTGGAGTACGCAAGAAAAAAGGCTGCCACGGATCCATTCATCATCTATGGATATTTtgaccttttaaaaaaaattctgacGGAGCTAAACTTAGAAGACAAGCCCACACAAATATGGAATTTGGACGAAAGCAGTCTCAGTATAGACCCGTCAAAATCCAGAATAGTAGGCGAAAGAGGTGAAAGCTCATCCAGAGTTATCAGTACATCTGGAAGAGAAAACACGACTTTTGTGCTGGCTGCTAACGCTGCAGGTGGTCGAGCGCCACCTCTAATCATTTTTAAggcaaaaaatgtatgggacCAATGGAAGGCACCACCAGAAAAGGAATATCCCGGTACAGCCTACGCTGCCACTCCGAATGCTCTGGGTGACGAACGGCCTGTACTGGTCATATGCGATGGCCATTCCACACATGTGTCTCTCGACCTAGTTGTAACTGCTTCGGCCAAAGACATAacaattcttaaactgccagcCCACACAAGTGACCAACTGCAGCCATTAGACGTTTCTGTATTCAAgtcttttaaacaaaaatgGGAGCAAACTGTTGCCACTTGGCAGCGGCAGAATATTGGCAAAAAGCTACCTAAAGCGCTATTTTCGCAATTTTTGGGCGAAACTTGGATCAGTGTCAATGAAGATGTTATCAAGAGCGGATTTAGAAAATCAGGGATATTTCCATTCAATTCTGACGTCATTCCCAGAGAAAACTTTTCTAAGGACGCTTTAGAGCGCTGGGAGAGGCACCTTAAAGGAGAGCTTGCGAGAGATGAGGCGAGTCCTGATCCTCATCGGTCAACTTTTAATAACTCATCACCATCAATTTTAAATCTACCCGCTTCCGAGGAGGAGGCCATTCCCACAACACCTCAATCGTCAATTGTCAATTATCAATCGTCACAGTATTCCGTACCAGCAACTCCTCAATCTTATGAGATTCTAGCCTATAATGCCGCGCCAACAATATCATTTGAACAGATCATTCTTTCAACTATACAGCAAAAACATCTGCCtgtaaataaagaaaagaaacgTAAGGTTGCCTCAGGTGCTGAAGTAGTTACGTCTGCTAGAATGCTTGAAGTGTTAAAGGAAAAAGAAAACTTAATTgcaaacaaaaaagctgaaataaacaagaaaaaagctaaaataaacaagaaaataggaaagaaagaaagaaaagtgaAGAAAAATGCTAAAGATTCAGAAAGTGACACTACAAATGTAGATTCAGATAGTGAAGTACCCTATGCGAATTCTGACGAAAGTGAATGGGTGGAAGAGGAAGTTGAAGCTCTTATTGAGTCAGACAATGAATCTACAATGACAGACATTAACAAAGAAAACAAGGCAGAAGAGGAGACTGGGCCAGATATCCATATTAACCAATGGGTGATTGTTAAATATACTTTAGtgaaaggatataaatattacgtAGGCTTCGTGCAAAAACAGATAGAAAGTCGTTGGGAGGTAAAGTTTGTACGACGTAAGGGTGCAATTTTTGCATGGCCTGTAATAGAAGATGTTGATACAATCACCGCTGATTCCATCGTTAAAATATTGCCGAATCCTACAATAACCAAACGTGGTATAATATCCTTTGATTTCAAGTTCAGAAATATGATTATTTTGTAA
Protein Sequence
MYEFCFPYQAAVVVAFFVCWAPFHFQRLFFIYGTSSPHYHDINEYLFYVAGAFYYISATVNPILYNVMSHRYRIAFTETLCCGKIKLKSRYREHSSVRETTVNHTSEGGHLVRVRSEIQDRRNRYVFLQITGITVRNYLKKKGPPKYSEEKLQRALNEIKAGTLTIHKASVLYGVPFAILYCRNKGTRGAIKKSKGRRTALPENVENVLATSIKTLAKWGFGLSRKEIIELVGQYVNMNKIETPFKRGIPGEDWFLNFKKRHHLSIRKPEPLEYARKKAATDPFIIYGYFDLLKKILTELNLEDKPTQIWNLDESSLSIDPSKSRIVGERGESSSRVISTSGRENTTFVLAANAAGGRAPPLIIFKAKNVWDQWKAPPEKEYPGTAYAATPNALGDERPVLVICDGHSTHVSLDLVVTASAKDITILKLPAHTSDQLQPLDVSVFKSFKQKWEQTVATWQRQNIGKKLPKALFSQFLGETWISVNEDVIKSGFRKSGIFPFNSDVIPRENFSKDALERWERHLKGELARDEASPDPHRSTFNNSSPSILNLPASEEEAIPTTPQSSIVNYQSSQYSVPATPQSYEILAYNAAPTISFEQIILSTIQQKHLPVNKEKKRKVASGAEVVTSARMLEVLKEKENLIANKKAEINKKKAKINKKIGKKERKVKKNAKDSESDTTNVDSDSEVPYANSDESEWVEEEVEALIESDNESTMTDINKENKAEEETGPDIHINQWVIVKYTLVKGYKYYVGFVQKQIESRWEVKFVRRKGAIFAWPVIEDVDTITADSIVKILPNPTITKRGIISFDFKFRNMIIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00758089;
90% Identity
-
80% Identity
-