Basic Information

Insect: Gonocerus acuteangulatus
Gene Symbol: -
Assembly: GCA_946811585.1
Location: CAMPFD010006879.1:33549-35177[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0002 0.041 16.2 3.0 1 23 26 49 26 49 0.95

2 18 0.00055 0.12 14.7 2.5 1 23 55 78 55 78 0.94

3 18 0.0023 0.48 12.8 2.8 2 23 85 107 85 107 0.95

4 18 0.00079 0.17 14.3 4.7 1 23 113 135 113 135 0.97

5 18 4e-05 0.0084 18.3 2.2 1 23 141 164 141 164 0.96

6 18 0.0002 0.042 16.1 1.7 1 23 170 193 170 193 0.95

7 18 0.0007 0.15 14.4 2.4 1 23 199 221 199 221 0.97

8 18 0.00078 0.16 14.3 4.4 1 23 227 250 227 250 0.95

9 18 0.0039 0.81 12.1 3.6 1 23 256 279 256 279 0.92

10 18 0.00059 0.12 14.7 1.7 2 23 286 308 285 308 0.92

11 18 0.00024 0.05 15.9 0.4 2 23 315 337 314 337 0.95

12 18 0.0023 0.48 12.8 4.8 1 23 343 366 343 366 0.96

13 18 0.0078 1.6 11.1 0.3 1 23 372 394 372 394 0.98

14 18 0.19 40 6.8 2.7 1 23 400 423 400 423 0.93

15 18 0.0015 0.32 13.4 5.1 1 23 429 452 429 452 0.94

16 18 0.0036 0.76 12.2 4.4 1 20 458 477 458 481 0.95

17 18 0.0002 0.041 16.2 1.7 1 23 487 510 487 510 0.95

18 18 0.00061 0.13 14.6 0.8 1 23 516 539 516 539 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0002	0.041	16.2	3.0	1	23	26	49	26	49	0.95
2	18	0.00055	0.12	14.7	2.5	1	23	55	78	55	78	0.94
3	18	0.0023	0.48	12.8	2.8	2	23	85	107	85	107	0.95
4	18	0.00079	0.17	14.3	4.7	1	23	113	135	113	135	0.97
5	18	4e-05	0.0084	18.3	2.2	1	23	141	164	141	164	0.96
6	18	0.0002	0.042	16.1	1.7	1	23	170	193	170	193	0.95
7	18	0.0007	0.15	14.4	2.4	1	23	199	221	199	221	0.97
8	18	0.00078	0.16	14.3	4.4	1	23	227	250	227	250	0.95
9	18	0.0039	0.81	12.1	3.6	1	23	256	279	256	279	0.92
10	18	0.00059	0.12	14.7	1.7	2	23	286	308	285	308	0.92
11	18	0.00024	0.05	15.9	0.4	2	23	315	337	314	337	0.95
12	18	0.0023	0.48	12.8	4.8	1	23	343	366	343	366	0.96
13	18	0.0078	1.6	11.1	0.3	1	23	372	394	372	394	0.98
14	18	0.19	40	6.8	2.7	1	23	400	423	400	423	0.93
15	18	0.0015	0.32	13.4	5.1	1	23	429	452	429	452	0.94
16	18	0.0036	0.76	12.2	4.4	1	20	458	477	458	481	0.95
17	18	0.0002	0.041	16.2	1.7	1	23	487	510	487	510	0.95
18	18	0.00061	0.13	14.6	0.8	1	23	516	539	516	539	0.94

Sequence Information

Coding Sequence: ATGTATGATTCTTCAGTCTATGACTCAACTACTGAACAAACTTTAAAGAATCATATCATGAGTGAACCTTCTAATCATGCATGTCCTTATTGTGACTACTCTTCAACCAATTTCCGATATTTAAAAAAGCACATCAACTCAAAACATAATAAAGACAAATCTCATTCCTGCCCTTACTGTGACTTCACTACAGTTCATTCTGGAAGTTTAAAGAACCACATCGGCTCTAAACATAGTAATGTGAAACCTCGCTCCTGCCCACATTGTGACTTCACTACAGCTCATTCTCAAAGTTTAAAGGATCACATTATCTCAAAACACAGTAAAGACAAACCACACTCCTGCCCACATTGTAAATACTCTACAGCTTtgtctcaaaatttaaaaagacaCATCTTCACACATAGTATTGACAAACCTCACTCCTGCCCTCATTGTGACTTTTCTACAGCTAATTctggaaatttaaaaaatcacattatcTCTAAACATAGTAATGAGAAATCTCACGCCTGTCCCCAATGTGACTTCACTACAGCTCATTCCGGAAATTTAAAGAACCACATTATATCTAAACATACTGAAGACAGACGTCACTCTTGCCCACATTGTGAATATACTACAGCTTTGCTTCGAGATTTAAGGAGACACATCTTGACTCATAGTAATGATAAACCTCACCCCTGTCCTCATTGTGACTATTCTACAGcttattctcataatttgaaacTACACCTTACCTCTCAACACAGTAATTCCAAATCTCACTCCTGCCATCTTTGTGACTTTACTACAGCTTACGCCCAAAATTTAAAGAGACACATTATCTTTAAACATACTAAATACAAACCTTTATCCTGCCCGAATTGCAATTACACTACAGCTAATTCTCGATATTTAAAGAGACACATACACGCTAAACATATTAATTACAAACCTCTCACCTGCCCTTATTGTGACTTCACTACAGTATATTCTGGAAGTTTAAAGACTCACATCAGCTCTAGACACAGTAATATTAAACCTCACTCCTGCCCACACTGTGACTTCACTACAGCTCATTCTCGAAGTTTAAAGGATCACATTATCTCAAAACATAGTACAGACAAACCTTACTCTTGTCCACATTGTATATACACTGCAGCTTTGCCTCGTGATTTAAAAAGACACATCTTGACACATAGTAATGAAAAACCTCACACTTGCTTGCATTGTGATTTTACTACAGCAgaattttataaattgaaaGTACACATCATCGCTAAACATAGTACAGACAAAACTCACTCCTGCCCTCATTGTGATTTTAGTACAGCTTATTCtcataatttaaaacaacacattGTCTCTAAACATAGTAACGATAAACCTTACTCTTGCGAGCATTGTGATTTCACTACAGTGTACTCATATAATTTAAAGAATCATATCATTTGTAAGCATAGTAATGATAAACCTCACCCCTGTCTTTATTGTGACTATACTACAGCTAGTTCTAAGGACTTAAAGAAACATATTATCCGTAAACATAGTAATGAAAAACCTCATTCCTGCCCATATTGTGACTTTGCTACAGCATATTCTGGAAGTTTAAAGAACCACATTATCTATAAACATAGTAATAAATGA
Protein Sequence: MYDSSVYDSTTEQTLKNHIMSEPSNHACPYCDYSSTNFRYLKKHINSKHNKDKSHSCPYCDFTTVHSGSLKNHIGSKHSNVKPRSCPHCDFTTAHSQSLKDHIISKHSKDKPHSCPHCKYSTALSQNLKRHIFTHSIDKPHSCPHCDFSTANSGNLKNHIISKHSNEKSHACPQCDFTTAHSGNLKNHIISKHTEDRRHSCPHCEYTTALLRDLRRHILTHSNDKPHPCPHCDYSTAYSHNLKLHLTSQHSNSKSHSCHLCDFTTAYAQNLKRHIIFKHTKYKPLSCPNCNYTTANSRYLKRHIHAKHINYKPLTCPYCDFTTVYSGSLKTHISSRHSNIKPHSCPHCDFTTAHSRSLKDHIISKHSTDKPYSCPHCIYTAALPRDLKRHILTHSNEKPHTCLHCDFTTAEFYKLKVHIIAKHSTDKTHSCPHCDFSTAYSHNLKQHIVSKHSNDKPYSCEHCDFTTVYSYNLKNHIICKHSNDKPHPCLYCDYTTASSKDLKKHIIRKHSNEKPHSCPYCDFATAYSGSLKNHIIYKHSNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00757806;
90% Identity: iTF_00757806;
80% Identity: iTF_00757806;