Gacu023430.1
Basic Information
- Insect
- Gonocerus acuteangulatus
- Gene Symbol
- -
- Assembly
- GCA_946811585.1
- Location
- CAMPFD010001241.1:470046-481381[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 2.5e-06 0.00053 22.1 1.1 1 23 158 180 158 180 0.96 2 29 2.4e-05 0.005 19.0 1.4 1 23 194 216 194 216 0.98 3 29 0.00075 0.16 14.3 1.5 1 23 240 263 240 263 0.97 4 29 8.6e-05 0.018 17.3 0.8 2 23 270 292 269 292 0.96 5 29 0.0029 0.61 12.5 0.9 1 23 370 393 370 393 0.94 6 29 0.072 15 8.1 0.8 1 23 424 447 424 447 0.94 7 29 0.96 2e+02 4.6 0.2 3 23 455 476 454 476 0.96 8 29 0.00093 0.19 14.0 0.7 2 23 546 568 545 568 0.96 9 29 0.51 1.1e+02 5.4 0.3 2 14 617 631 616 640 0.82 10 29 0.0098 2 10.8 0.1 2 23 649 671 649 671 0.95 11 29 0.001 0.21 13.9 0.7 1 23 677 700 677 700 0.95 12 29 0.00076 0.16 14.3 2.6 1 23 708 730 708 730 0.97 13 29 0.0047 0.99 11.8 1.1 2 23 791 813 790 813 0.95 14 29 0.00061 0.13 14.6 2.4 2 23 820 841 819 842 0.95 15 29 0.0079 1.6 11.1 3.0 1 21 863 883 863 884 0.95 16 29 0.00056 0.12 14.7 2.9 1 23 903 926 903 926 0.96 17 29 0.14 28 7.2 1.4 1 23 929 952 929 952 0.93 18 29 1.1 2.4e+02 4.3 1.1 2 23 959 982 958 982 0.95 19 29 0.2 41 6.7 2.4 1 23 989 1012 989 1012 0.94 20 29 0.21 44 6.6 0.2 2 23 1019 1041 1018 1041 0.93 21 29 0.00076 0.16 14.3 1.9 1 23 1049 1071 1049 1071 0.98 22 29 0.0009 0.19 14.1 0.2 3 23 1078 1098 1077 1098 0.96 23 29 7.9e-05 0.016 17.4 0.6 2 23 1167 1189 1166 1189 0.95 24 29 0.067 14 8.2 0.7 2 23 1266 1288 1265 1288 0.95 25 29 2.7 5.6e+02 3.2 0.8 2 23 1329 1350 1328 1350 0.94 26 29 0.13 27 7.3 8.1 1 23 1362 1385 1362 1385 0.96 27 29 0.011 2.3 10.7 0.3 1 23 1425 1447 1425 1447 0.97 28 29 0.0005 0.1 14.9 1.8 1 23 1453 1476 1453 1476 0.94 29 29 0.051 11 8.6 0.7 1 20 1481 1500 1481 1502 0.93
Sequence Information
- Coding Sequence
- ATGGATAACTCTACACTCAAGGATTACGAAGAACTATGTAGGCTGTGTGCCAGTTATGATGCCATCAAACTTCCAATATTCAGTGAACGTGGTCGAGCTAGAAACCTCAAAGATAAAATCACTACTTGCCTTCCCTTTGATgTATCCGAAAATGATCTCTTACCAAAGTCATTGTGTTACCGATGTATTTACAATCTAGAAAACTTCTATGATTTCCGTCGAGGGTGCATTGATGCTAGAACAAGACTTGAAAATGTTATTAAAGAAGTCCTAAAGACTGAGCCCAAGGACGAAACAACAATTGTTAAATTAGAAGATACTTGTGCAAATAATGAAGAATCACGCCTCGAAAATGATATAATTGAGTCAGACGGGGAGGGAGACTGCCCAAATCCAGCAGACTTTGTGGAGGCTTGTTGGGCTGAGTCTCCTCATTATGGATCTAAAAATGGCGTGGACGAAGAAGGAACTTTTCCATGCAAAATTTGCGACAGAACATTTAGCTCAAAAAGTTCATTGACCATTCATGCAAAaTTTCATCAGGATATTTCCGGAGGACCAGaaagtaataaagaaaattattcttgttttgtCTGTGATAAAGTGTTTTCTAGTAAAGGACACTTGGCCCTCCATTCTAAAGTACATATTGGAGAAACTGGTTCTCCGCCTCTGTCTACCTCCAGCAGATCCAGTACAGCTGCTAATATGAAGTTATATCGTTGTGATTTGTGCAATAAAACTTACTCAATGGCCAAACATTTATGGGGCCATGTTAGCACGACTCACAAAGGTCACCCCCTCGTCACTTGTAGTCtttgccaaaggactttttctTCCGTTTCTAACCTGGAAGATCATAAACGAATCAAACATAAAGATGACCAACTAACGGACGAGgtATGTGATTCGCCTCAGATTATTGAAGATGACTCAAATTTGgaaaagaaatgtgaagaaGTTCCATCCAATAGAAGAAAGAATTCAAAGCCACGGAAAATTGAGCGCGAATTGAATAATTTAGAACCAAATAATATTTACACGAATTCTGACTCAAATTCCGGAAATGCTCACATTGAAAGTTGTCAAAATAGCCCAGAAAAAATTCATTCTTGTTTTATGTGTAATGAACTTTTCAGGGATGCAGATAATTTAAGTCAGCATCTTCTCCAAGTTCATTCATACGATGGTCCCTTAGATTTTAGCAATTATAATCGTAACGAATGTGGAGAAGAGTATGCCGAGAGCATGATGGAAGCAGAAACTGTGTTTTGTTGTGAAATCTGTATTAGAGAATTTAATGACAGGGGGAGTCTTTGGTTACATTTACTATATTCACACAAAAATGCAGCTTCGAAGGCCTGTGGAGTCTGCTTGAAAATATGTGAGGACACGGAGAGTTTGGTTCAGCATGTCGAAACATCTCATCCTAGAAGTAAATCTGATCAGAGGAGATACAGCTGCCAAGTTTGTGCGCGACAACATGATTCACGGAAAAAATTAGTTACTCATGCCAAAATTCATAAATTAGTAGATGCAGAAGGGAATCTTGTCGATCCGGAAACAGTAGTCGTCCAGAATGCCGATTTCTACCCCGATGGATTTCTCCCTCATCCTCTCGACGACAATTATTTGAGCTGTGAAGTTTGTTTTAAAGTATTTGATAACGACAGTAAACTATTAAAGCATAAGAGAAGCGCTCACAAAGATTTAGGAGGTCTTAATAGCTCATTGAGTTCAGGGACTTACCACTTTTATTTCGCTTGTGAAATCTGTGGCCTTTCACACTTATCAAGAGCCGATAGGTGGAAACATGTGTCGACTACTCACGCAGGCGATCCCAGCGTTACTTGTGAAGTACCAGAATGTGGTAAAGTTTTCCCAACGAGTTCCATAAAGAAGGAACATGGTACGCATCATGCTGCTCAAGGCCAATATCCCAACACTTGTGAAGTGTGCGGGAAAATGTGGAAAACGCGAGTCGAGTATTGGAAACACATGATGGGAGTTCATCCAGATTTCTTACCTTTCATTTGCGGTGTCTGCCTCAAAGTATTTTGTAACTTATCAACCTTAGTTAGTCATGTTAGGGAAACCCATTGGCCTTTATTGGGTGGCGATTTCTGCTGTGATATATGTGGTAGGCCTTACTCAAAAGTTTCAAAAATGACTAGGCATAGAAAAGTTCATTatgttcctgataatcctccggAATTACAAGCTCTCCTGGATAACCCAAAAGTTCAAAGCGAACCTCATTTTCTTCAGCAGCCTTCATCACTGGTATGCGATATGTGTGAAAATAGTACGACTGAATACGAAAATATCGAAGCTCTCGGGAAACACAGGAACGAAGCTCACAATGTTATGCCCTGTGATTTATGCACTAAGTATTACGGAAGAACATCACATCTCTGGAAACACGTAAATAAGATTCATAAAGGGCATCCTGATGTTACTTGTCCTACGTGTCAGCGAACTTCAGCGTCGAAATCTCATCTTGCAACCCACATTGCTAAACATCACAGAACAGAAGATATGGGACCACCTCCTACAAAAGCCAAGGAAAAAGAGCCCAACGGAGTCCATACCTGTGAAAAATGTTCTAAAGTTTTCAGGAAAGAGACGCTTGTTAGAAAACATATCAAACATTGCAAAGGTCCTAGACCAACTCCAATTCCTTTACCGCCTCCTGTCAACGGAGTATACGCATGTGACAAATGCGAGAAATCATTTAGTGCCAGGAATTTATTGTACAAGCATATGAAACACTCACATATTGCGTTTAAGTGTGAAATATGTGAGGTGAAGACTTATTCAAGAACTGAACTGTATCAACATGTTTGTGCTGAGCATGCTGACCATCCAGACGTTAAGTGTAGTGTAACTGGCTGTGATAAAATTTTACGCTGTAAAGCTGATCTCGACAGGCACTTGAAGAACCATCGTTTAAGCTTTCAGTTGCATTATTGTAAGTTTTGTGCTGAATTAGTTACTagcaaatacaaattaaaaagacATTTAAAAGCAATCCatggtaatgaaacaaaattcTTGTGCGCATTATGTTTAAAAGCACTTTCCAGTTTTAAGGAATTGAAAGCCCACGTCGAGACAAATCATAAAGCTGCTTTGGGTAGAGGTTTTACCTGTCAAGTATGTGCTAAACCTTGTtcgaataaatcaaaattagttGAACACATTAAATACCATGGTACGGATTTTAACCCTTGTAAAATTtgtctaaaaatattttcaacaaaagAGGAATTAGATAACCATATAGATAATCATCCTAGTGATAGTGGCGATGAAGAAGACCAAGTCGAAGATGTCGAATTAGATACAAATAGCATAATGGATATTATAGGAGCATCAAAAACTAACGTAAATACTGAAGAGGATCAGGACAAGGAAAGTGATAAACGTAAAGTaggagaagaggaagaagaagagGATGAATCAAATAAGCCAAAAAAGAAATCAAAACTCGAAATGGAATGTTCTGTTTGTTCAGAAACgttttattcaaaaatgtctttaagGAGGCACATGAAAGCCGAACATAACATTAAACCAGTTATAAATAGATATTCCTCAGATAAGAAGGATAGCAGTATAGCTGATATGTCTCTAACAGGTAGCTCTATGAATGAAGAAAGTGATACAAGCGGTTGGGATAATACAGCCGACTCGGATAAAAACTTTATGCATCAGCTTGGTTTAATGCCTGAAGTAGAGAAAATAAAGACAAGGCATGTTAGGAAAGTATATACTGACGATGACGTTCCTTCTAAGTGTGAAATCTGTGGGAAAATGTGGCCAGCAAAAAAACATTTATGGCAACATTATATACGGTTTCATAAGAATGAATGTGGTCGGACGTGTGGCGTTTGTCTCAAGTTGTGCCCAGATTATCCATGCTTGAGTGCACATTTGGCTATTGAGCATCCTGATAATTTTGAAGACACTTCATCAGAGCTGATTTGTCGAGTGTGTGGAAAATACCATAATGCCAAATCAAAACTTTTGAGTCACGTTAATATACATACAGGTCACAAAGAGAGGGCACTTGATCCTCTTCACCACTGTTTAATTTGTAACAATGTTTTTCCTCAGTTCTCACAGTTTTGCCATCATATTAGGAGTGATCACAACATAGGGGAAGGAGATGGTAAAGATGATGTTCCAAAGTCTGAGTCTCCGACTAGCGAGCAACCCTCGAACGATTCctcaaaaaataatgaagttcaAAGCACAAAATTGCCGTTTCATACGTGCGATGTTTGCTCTTTAGTATTTGCTAGTGAAATTGGTTTAACTAACCATAAAAGCATTCATGAAAATTCTGATAATTTCAAGTGTGGGCAATGTGGCGAAGTCTTCCAGTCTGCAGAAAACCTCTGTACTCACAAACTCCAAAAACATAAAGGCACAGAATTTGTATGTGCCGATTGTAAATCAAATTTTTCGACATATACACAACTTACCGAGCATAACAAACAGTGTAAAATGAAGTTAAAAAATCTTGGGGATGATTCTGATGATGACGATCTCTTGCTAGACGACATTGAAGATCTTGAAGCATCGTATGACGCTAACGACACAGTTATGTCATCGGAATCAGACGATTTAGAGAAGACAGGGTTTCCCGAAGAAAACGATTTGGAATCACAGGGATCACTCAGTGATGAAGACGAAAAATCAAACATGTCAGAAATATCTCACAAAGAGCCTAAAGCTGTAGAAGCATTTTTGTTTGACAGCAACGTTGAAGTAGTTCAAGTTCATCTTGACgataattcaaaattataa
- Protein Sequence
- MDNSTLKDYEELCRLCASYDAIKLPIFSERGRARNLKDKITTCLPFDVSENDLLPKSLCYRCIYNLENFYDFRRGCIDARTRLENVIKEVLKTEPKDETTIVKLEDTCANNEESRLENDIIESDGEGDCPNPADFVEACWAESPHYGSKNGVDEEGTFPCKICDRTFSSKSSLTIHAKFHQDISGGPESNKENYSCFVCDKVFSSKGHLALHSKVHIGETGSPPLSTSSRSSTAANMKLYRCDLCNKTYSMAKHLWGHVSTTHKGHPLVTCSLCQRTFSSVSNLEDHKRIKHKDDQLTDEVCDSPQIIEDDSNLEKKCEEVPSNRRKNSKPRKIERELNNLEPNNIYTNSDSNSGNAHIESCQNSPEKIHSCFMCNELFRDADNLSQHLLQVHSYDGPLDFSNYNRNECGEEYAESMMEAETVFCCEICIREFNDRGSLWLHLLYSHKNAASKACGVCLKICEDTESLVQHVETSHPRSKSDQRRYSCQVCARQHDSRKKLVTHAKIHKLVDAEGNLVDPETVVVQNADFYPDGFLPHPLDDNYLSCEVCFKVFDNDSKLLKHKRSAHKDLGGLNSSLSSGTYHFYFACEICGLSHLSRADRWKHVSTTHAGDPSVTCEVPECGKVFPTSSIKKEHGTHHAAQGQYPNTCEVCGKMWKTRVEYWKHMMGVHPDFLPFICGVCLKVFCNLSTLVSHVRETHWPLLGGDFCCDICGRPYSKVSKMTRHRKVHYVPDNPPELQALLDNPKVQSEPHFLQQPSSLVCDMCENSTTEYENIEALGKHRNEAHNVMPCDLCTKYYGRTSHLWKHVNKIHKGHPDVTCPTCQRTSASKSHLATHIAKHHRTEDMGPPPTKAKEKEPNGVHTCEKCSKVFRKETLVRKHIKHCKGPRPTPIPLPPPVNGVYACDKCEKSFSARNLLYKHMKHSHIAFKCEICEVKTYSRTELYQHVCAEHADHPDVKCSVTGCDKILRCKADLDRHLKNHRLSFQLHYCKFCAELVTSKYKLKRHLKAIHGNETKFLCALCLKALSSFKELKAHVETNHKAALGRGFTCQVCAKPCSNKSKLVEHIKYHGTDFNPCKICLKIFSTKEELDNHIDNHPSDSGDEEDQVEDVELDTNSIMDIIGASKTNVNTEEDQDKESDKRKVGEEEEEEDESNKPKKKSKLEMECSVCSETFYSKMSLRRHMKAEHNIKPVINRYSSDKKDSSIADMSLTGSSMNEESDTSGWDNTADSDKNFMHQLGLMPEVEKIKTRHVRKVYTDDDVPSKCEICGKMWPAKKHLWQHYIRFHKNECGRTCGVCLKLCPDYPCLSAHLAIEHPDNFEDTSSELICRVCGKYHNAKSKLLSHVNIHTGHKERALDPLHHCLICNNVFPQFSQFCHHIRSDHNIGEGDGKDDVPKSESPTSEQPSNDSSKNNEVQSTKLPFHTCDVCSLVFASEIGLTNHKSIHENSDNFKCGQCGEVFQSAENLCTHKLQKHKGTEFVCADCKSNFSTYTQLTEHNKQCKMKLKNLGDDSDDDDLLLDDIEDLEASYDANDTVMSSESDDLEKTGFPEENDLESQGSLSDEDEKSNMSEISHKEPKAVEAFLFDSNVEVVQVHLDDNSKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01309628;
- 90% Identity
- -
- 80% Identity
- -