Gacu053448.1
Basic Information
- Insect
- Gonocerus acuteangulatus
- Gene Symbol
- spoplb
- Assembly
- GCA_946811585.1
- Location
- CAMPFD010004402.1:52648-57529[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 5.5e-16 4e-13 51.3 0.0 1 77 160 234 160 236 0.89 2 12 0.02 15 7.7 0.0 53 77 236 260 232 262 0.87 3 12 0.02 15 7.7 0.0 53 77 262 286 258 288 0.87 4 12 0.017 13 7.9 0.0 53 77 288 312 283 314 0.86 5 12 0.017 13 7.9 0.0 53 77 314 338 309 340 0.86 6 12 0.02 14 7.7 0.0 53 77 340 364 336 367 0.87 7 12 0.02 15 7.7 0.0 53 77 366 390 362 392 0.87 8 12 0.02 15 7.7 0.0 53 77 392 416 388 418 0.87 9 12 0.02 15 7.7 0.0 53 77 418 442 414 444 0.87 10 12 0.02 15 7.7 0.0 53 77 444 468 440 470 0.87 11 12 1.7e-07 0.00012 24.0 0.0 53 109 470 526 465 527 0.92 12 12 4.1 3e+03 0.2 0.0 81 108 530 557 524 558 0.86
Sequence Information
- Coding Sequence
- ATGAAATCAGTAGTTGTCACGGAAGGGCTACAGCTTACCAAATTACTGGAAGAATTCGATGATGTATTCCGATCTGAAATAGGAGAAATTCCAAATGAAAGGACCAGATTGCATATAAGTCAAGATTCAAAACCAGTATTTATAAAACCAAGTCCCCTAATCAATAAAACAGAAGGAGATATAAGTGTGTTTCTGGTGAACAAATCTGGATTGGAAACCGTTGTAGAGTTCAATTTTTCTATTTTGGATATAGAAAAAATTAAGTGTTGTTCTGCTACATCTggtatacataaatttaaacttttgaaaCCAGAATGTGGTTTCCATAAATTAACAACCCGTGAAAAGTTAAAGGAAAACAGTGATTTACTTCCCGATGGAAATCTTACAATACTTTGCGAGATCCGGGTTTTGGAGATTCTTGAAGATCCTTGTACCTACAGGAAGATAGCAACCACGGGCAGGCTCAGAGAACACTTCAAGAATTTGTTGTCAACACCAAAATGGAGAGACGTTACTATAAAAGTCGGCGAAAAGACTTTTCCTGCCCAAAGAGCCATCCTCGCGACGAGCAGATCAGTATTCGCTGCAATGTTTAACAGCGACTTGGAAGTAAGCAGATCACACATTGTAGAAATATCTGACATAGAACCGCAAGTAATGGAAGAAGGTCTCCTATTTATCTACACTGGTAAATGTAGCAAAGTCTACGAAATATCTGACATAGAACCGCAAGTAATGGAAGAAGGTCTCCTATTTATCTACACTGGTAAATGTAGCAAAGTCTACGAAATATCTGACATTGAACCGCAAGTAATGGAAGAAGGTCTCCTATTTATCTACACTGGTAAATGTAGCAAAGTCTACGAAATATCTGACATTGAACCGCAAGTAATGGAAGAAGGTCTCCTATTTATCTACACTGGTAAATGTAGCAAAGTCTACGAAATATCTGACATAGAACCGCAAGTAATGGAAGAAGGTCTCCTATTTATCTACACTGGTAAATGTAGCAAAGTCTACGAAATATCTGACATTGAACCGCAAGTAATGGAAGAAGGTCTCCTATTTATCTACACTGGTAAATGTAGCAAAGTCTACGAAATATCTGACATAGAACCGCAAGTAATGGAAGAAGGTCTCCTATTTATCTACACTGGTAAATGTAGCAAAGTCTACGAAATATCTGACATAGAACCGCAAGTAATGGAAGAAGGTCTCCTATTTATCTACACTGGTAAATGTAGCAAAGTCTACGAAATATCTGACATTGAACCGCAAGTAATGGAAGAAGGTCTCCTATTTATCTACACTGGTAAATGTAGCAAAGTCTACGAAATATCTGACATAGAACCGCAAGTAATGGAAGAAGGTCTCCTATTTATCTACACTGGTAAATGTAGCAAAGTCTACGAAATATCTGACATAGAACCGCAAGTAATGGAAGAAGGTCTCCTATTTATCTACACTGGTAAATGTAGCAAAGTCTACGAAATGCCTAAGGAATTAATTCATGTGGCCTGTAAATACGATTTGGAGGGGTTAAAATATTTATGCGAAGATGTTCTAGCCGATCAGCTGAGCTGTGAGAATGCAGCTGATGCATTGATCATTGCGGATTTGTACAAGAGTGAAGAACTCAAAGCTAAAACTCTAAACTTCATTAACGAACACTGCAAAGAAGTTGTTCGGAGCAAATCTTGGAAGAAAATGGCTGCTTCCAATCCTCAATTGGAAAATGAAGGCCTACGAACGATGGTAAATCATCATATtatcctcaaataa
- Protein Sequence
- MKSVVVTEGLQLTKLLEEFDDVFRSEIGEIPNERTRLHISQDSKPVFIKPSPLINKTEGDISVFLVNKSGLETVVEFNFSILDIEKIKCCSATSGIHKFKLLKPECGFHKLTTREKLKENSDLLPDGNLTILCEIRVLEILEDPCTYRKIATTGRLREHFKNLLSTPKWRDVTIKVGEKTFPAQRAILATSRSVFAAMFNSDLEVSRSHIVEISDIEPQVMEEGLLFIYTGKCSKVYEISDIEPQVMEEGLLFIYTGKCSKVYEISDIEPQVMEEGLLFIYTGKCSKVYEISDIEPQVMEEGLLFIYTGKCSKVYEISDIEPQVMEEGLLFIYTGKCSKVYEISDIEPQVMEEGLLFIYTGKCSKVYEISDIEPQVMEEGLLFIYTGKCSKVYEISDIEPQVMEEGLLFIYTGKCSKVYEISDIEPQVMEEGLLFIYTGKCSKVYEISDIEPQVMEEGLLFIYTGKCSKVYEISDIEPQVMEEGLLFIYTGKCSKVYEMPKELIHVACKYDLEGLKYLCEDVLADQLSCENAADALIIADLYKSEELKAKTLNFINEHCKEVVRSKSWKKMAASNPQLENEGLRTMVNHHIILK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -