Gacu008166.1
Basic Information
- Insect
- Gonocerus acuteangulatus
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_946811585.1
- Location
- CAMPFD010000371.1:107875-137282[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.5e-17 2.5e-12 48.6 7.3 1 34 14 47 14 80 0.84 2 3 7.4e-71 2.5e-66 225.9 13.9 71 300 157 422 103 422 0.78 3 3 0.014 4.6e+02 1.7 4.2 120 172 420 472 419 482 0.91
Sequence Information
- Coding Sequence
- ATGACTCACACACTCGCTCCGGTCTActcgcctgcgcagGCTGAGTCTAGACTTGCTGCGAAACGGCAGGCTAGAGCAGAGGCGAGAGAGATACGGATGCGAGAGATAGAGAGACAGCAACGAGAGCAAGAGGAATCTAGGACAGGTGGTCAGGTCTATGAGATAGGCACTACAAGTAGATGGAGTGCGAAGTACTACAAGGCAGAACAGCAGCAGTGGAAGGCTGTCTGCGTCCAACAGTTACCACTCTTCACGGAGGAGTTCGGAAGATTCCCTCGAAGAGACCTCTTCCCTCGGCCACATCAGGAATCAGGAAGTTCAGATTCCGAGGACGTAAAGAATGGAATATCTGACTCTAGTTCAGATACCGATTCGGAAACAGATTCCTCCATAGAAGGCGGTGATACAAACGAATCTTCCAAAATAACTAGTTCGAGCTCAAAAGTAAATGGATCACTTAATTGTGTTGTTAGCTCAAAATCTGAGCCGTCGATAGAAGATGAGTCGAAGGGAGACCAAAATGTAGTCCCTAATAATGTAGGGAAAAGAGAGAGTGTCGGAAGTGATGATAGTGACGACGTTTGCCCGCCCGAGAATCTCTCGGGATTGCTTTCTGAGCTAACCGGTTCTGTTTGTGGACAGAGTGAGCTGAGGGAAGCAGAGGACAAGTTCCGGAAGGCTATGATCGGAAATGCCCAGCTCGACAACGAGAAAGCTGCAGCCGCTTACCAAGTAGACCTCTACAAGGATCGGCTGGAGGAACTAGGCGAGGAGTACAGCCAGCTACAGAGAGAGCATAAGGAGAAATGCAGGCAGTACGAGCAGATGAAACGAGACTCGGACAAGCTGAGTAAAGACCTAGCATTGGCCCTCGCTGCTCTTGAAGAGAGAGATCGGCTTATACAGGAACAAGGACTGGTGATTGTCGGAGGAGATGGTTCCTCTTCAAGTGAGACGGATGAAGAGGGTGAAGATCGGCCTAAAAAGAGACGAGGCGAGAAGAGAGCGCTTGTCTCATCAGAGAATGCCAATCTTCTGGCCTCTGTTTCTGGTTCATTAGATGTAAGATTGAAGAAGCTCGCTGCTGAACGGAACGAACTATCTGATGAACTGCGCCATGTAAAGCTCGAACTTGAAGAGGAGAGGAATCGAGGGCGAGGACTCGGAGCTACACCATCAGATCTTGAGGATATTCAGAGAGAAGCGAACAAGCAACTTGGTGATTATAAATTCAAACTTCAAAAAGCTGAGCAAGATGTTTCCACCCTTCAAGCAACGGTCGCTAGGCTGGAGGGTCAGGTTACTCGCTATAAGACTGCTGCCGAAGCAGCGGAGAAGGTTGAAGATGAACTTAAACTCGAACGGAGAAAGTTGCAGCGAGAGTTAAGGGAATGTCAGGCTCGGATTGAGGAGCTGGAGACATCGAATACTCATCTCCAGCGACGACTCGATAAACTCAAAACTGCCAAGTCTGCTCTTCTCAAAGACTTGTAG
- Protein Sequence
- MTHTLAPVYSPAQAESRLAAKRQARAEAREIRMREIERQQREQEESRTGGQVYEIGTTSRWSAKYYKAEQQQWKAVCVQQLPLFTEEFGRFPRRDLFPRPHQESGSSDSEDVKNGISDSSSDTDSETDSSIEGGDTNESSKITSSSSKVNGSLNCVVSSKSEPSIEDESKGDQNVVPNNVGKRESVGSDDSDDVCPPENLSGLLSELTGSVCGQSELREAEDKFRKAMIGNAQLDNEKAAAAYQVDLYKDRLEELGEEYSQLQREHKEKCRQYEQMKRDSDKLSKDLALALAALEERDRLIQEQGLVIVGGDGSSSSETDEEGEDRPKKRRGEKRALVSSENANLLASVSGSLDVRLKKLAAERNELSDELRHVKLELEEERNRGRGLGATPSDLEDIQREANKQLGDYKFKLQKAEQDVSTLQATVARLEGQVTRYKTAAEAAEKVEDELKLERRKLQRELRECQARIEELETSNTHLQRRLDKLKTAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -