Gleg008739.1
Basic Information
- Insect
- Goniozus legneri
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_003055095.1
- Location
- NCVS01000263.1:414208-415890[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2e-112 1.7e-108 362.2 36.4 1 300 29 323 29 323 0.95 2 3 0.0055 78 2.1 3.2 122 171 323 372 321 375 0.90 3 3 0.042 5.9e+02 -0.8 6.2 194 238 354 397 341 398 0.57
Sequence Information
- Coding Sequence
- ATGGAATCTAGTGTGGCTGGACGTAGACGAATCACAACAAGACATTCTGCTGAAGATCAAGCTTTGGATCAAATCGCAAAAGAAGCTGAAGCACGTTTAGCTGCTCGAAGACAAGCAAGAGCAGAAGCAAGAGAAATTCGTATGAAAGAATTAGAAAGACAACAAAAAGAAGCTGAAGAGAATGCAGATAGGGTTTATGACATGTGTTcagCTGATATAACAAGAACTATGCGTGTCACTCCAGATCCATCAAGAACGTCGCGTATTATTCCTAATTCTAATAACTTTCAACTAAGTCGTAGATCTTCCGAAGATTCGTTAGAGGATGCTGGGTTACATAGAGATCTcagaATAGAATTGAAGGAATTTGAAGAAAAGTTTAGGAAAGCAATGATAGCTAATGCTCAATTAGATAATGAAAAGTCTTCTTATGCTTATCAAGTTGATTTATTGAAAGATAAATTGGAAGAATTGGAAGAGACAGCTGCACAATTACGAAGAGAATTCagagataaaaatagagaagcAGAGCAACTCAAACGAGTCAGCCAACGTTTTAAAGAAGAGCTGGAAATGTGCAGAGCTCAATTAGCAGAAAGAGATTCTTTAATACAAGAAAATGGCTTAGTTATAATCGAAGATGAGAATGTTGATGATGAAGAAAACGAAACTGAAAATAGACTTTCCCCTAGGAAAAAAGTTTTAGTTAGTACTGAAGCTGctgaattattacaaaatgcTGGGGAAGGATCATTAGATGTTCGGCTACGAAAATTTGCATCTGAGAAGAAAGAGTTACAAGATGAAATTCGACATCTTAGATTGGAATTAGAAGAAACTAGAACACGGTTGAGACCTGAAAGATTATCAGGTGGATTAATGGACTCGGAAGATATACAACGAGAAGCAAATAAGCTTTTGGCTGACtacaaattcaaattacagaaGGCAGAACAGGATATGTCCACATTACAGGCCACAGTTGCTAGGCTTGAAAGTCAAGTTATTCGATACAAATCAGCTGCAGAAGCATCTGAAAAAGCTGAAGATGAGTTAAAAGTGGAGAAAAGGAAACTACAAAGAGAAGTAAGAGAGTCTCAAAGTCGCGTCGAAGAGCTTGAGACCGCAAATTCTCATTTGCAAAGGCGATTGGATAAgctaaaaaatgcaaaatcagCTTTATTGAAAGAACTTTGA
- Protein Sequence
- MESSVAGRRRITTRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMKELERQQKEAEENADRVYDMCSADITRTMRVTPDPSRTSRIIPNSNNFQLSRRSSEDSLEDAGLHRDLRIELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETAAQLRREFRDKNREAEQLKRVSQRFKEELEMCRAQLAERDSLIQENGLVIIEDENVDDEENETENRLSPRKKVLVSTEAAELLQNAGEGSLDVRLRKFASEKKELQDEIRHLRLELEETRTRLRPERLSGGLMDSEDIQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQSRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- -
- 80% Identity
- -