Gleg006743.1
Basic Information
- Insect
- Goniozus legneri
- Gene Symbol
- bab1
- Assembly
- GCA_003055095.1
- Location
- NCVS01000496.1:131978-151323[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.4e-12 1e-09 37.6 0.0 1 39 390 429 390 433 0.90 2 4 4.4e-12 3.1e-09 36.0 0.1 2 39 445 482 444 485 0.94 3 4 5e-18 3.5e-15 55.1 0.0 3 45 501 544 499 544 0.96 4 4 1.9e-18 1.3e-15 56.5 0.1 1 42 551 593 551 594 0.97
Sequence Information
- Coding Sequence
- atGGAGACAGATCGTTATTGGGGCGTACACTACAGCGGAGGCATGGCCGGGCAGCACTACTGCCTCAGGTGGAACAATTATCAGTCAAATATGACGTCCGTGTTTCACCAGCTACTTCAGACGGAGGCTTTCGTCGACGTCACATTAGCTTGCAACGAAGCCTCGCTGAAAGCGCACAAGGTAGTGCTCTCGGCGTGCAGTTCCTACTTCCAGAAGCTCCTGCTCTCGAATCCGTGCAAGCACCCGACCATCATAATGCCTCAAGACGTTTGCTTCAACGATCTGAAATTCATCATCGAGTTTGTCTATCGGGGCGAGATCGACGTTTCACAGGCTGAGTTACAGTCGCTTTTGAAGACGGCCGATCAGCTGAAGATCAAAGGGCTGTGCGAGGTGCCGGAGAGTCGCGAGGGTCCGCCGTCCGTGAGTCTGAGCTCGCCGCCGAGGGAACCCGGCACGCCGCGTCTCAACTTCAGCAAGTTGAAGAGGCACCATCAGCGCTACAAGCGAGCCAGGACGAGCTTCGAGCAACGGACCAGCGAGTCCAGGCACTTCGACCGGTACAAGGAGGAGGAGGCGAACGAGGATTACAGTCGCGAGAACAAAGAGAACCATAGGGACTGGCCGACCGAAGATGAAGAGTGCGCGGAGTCAACCCCGGCAACAGTAGTACTGGAAACTTGCCAGCGAAGCGGCAGCAACGGTAGCGGCgcgaacaacaacaacaacaataataataacaataacgGTGACATGTTCTGTCACACGGGACTGGGCCATTATGGGCATCATCCGGACCCCGCCGAGGTGGATCTACCGCCGGAAACGCAGCCGACGCCGCCGAGCGCGACCCTCGTCGGTACCACGATCACCCACCTCAGAGACCCGGACCACCACACAGaaatacaaaattgcGACAGCGTGAAGATCAAATTCGAGACCCTGCACACGATGGACTCGTCGGACACGATCGACATTGACAGTCACATGTCGGATCGCGCGAGTGTCAGTTCGAAGAACGCGGGAGACAGCGACAATATGATGATGATAACGCCGGAGTTGCTGGGCCTGATGCCGTCCGGTAGCTCGGTGCACTCGGATTCCGGCGAGATGAACACGAGGCCGCACGGCCAGTCGAGTTCGCATCATCACGGCTCGAAGTCGTGGACCCAGGAGGACATGGACGCGGCCCTGGAGGCTCTCAGGAATCACGACATGAGCCTGACGAAAGCATCCGCAACGTTCGGGATACCATCGACGACGTTGTGGCAACGGGCGCACAGATTGGGCATCGACACGCCAAAGAAGGACGGCCCGACGAAATCCTGGAGCGACGAGAGTCTGAACAACGCTCTCGAGGCCCTCAGAACGGGCACGATATCGGCCAACAAGGCGTCGAAGGCGTTCGGCATACCGTCCAGCACGTTGTACAAaatcgcgagaagagagggTATTCGACTGGCCGCGCCGTTCAACGCGAGCCCCACGAATTGGTCGCAAGCCGATCTGGACAGGGCGCTCGAGGCCATCAGGTCGGGCCAGACGTCGGTCCAGCGAGCCTCGACGGAGTTCGGGATCCCGACCGGCACGCTTTACGGCAGATGCAAGAGGGAGGGCATCGAGCTCAGCAGAAGTAACCCCACGCCGTGGAGCGAGGACGCCATGACGGAGGCTCTCGAAGCCGTCAGattaGGGCACATGAGCATCAATCAAGCGGCTATACATTACAATCTTCCTTACTCGTCGTTGTACGGGCGCTTCAAGAGAGGGAAGTACGAAGAACCGGTAGTCAACGAGATGTCGCAGGATGGCACGAATCCGCACTTTCATCAAAGCCCAAATCAAAACCATTCATCCTCGCTTCCAGATCAAATGCCTTATCAAGGCAGCTGA
- Protein Sequence
- METDRYWGVHYSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESREGPPSVSLSSPPREPGTPRLNFSKLKRHHQRYKRARTSFEQRTSESRHFDRYKEEEANEDYSRENKENHRDWPTEDEECAESTPATVVLETCQRSGSNGSGANNNNNNNNNNNGDMFCHTGLGHYGHHPDPAEVDLPPETQPTPPSATLVGTTITHLRDPDHHTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAGDSDNMMMITPELLGLMPSGSSVHSDSGEMNTRPHGQSSSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTNWSQADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVNEMSQDGTNPHFHQSPNQNHSSSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_00391429;
- 80% Identity
- iTF_00756766;