Basic Information

Insect: Gonioctena quinquepunctata
Gene Symbol: BCL11A
Assembly: GCA_018342105.1
Location: JAFIRS010002434.1:9729-93015[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 2.1 2.4e+02 3.5 0.1 2 11 28 37 27 40 0.87

2 7 4.1 4.7e+02 2.6 1.2 1 23 186 209 186 209 0.93

3 7 3e-06 0.00035 21.9 3.2 1 23 486 508 486 508 0.96

4 7 2e-05 0.0023 19.3 4.6 1 23 514 536 514 536 0.99

5 7 1.6e-07 1.9e-05 25.9 2.9 2 23 727 748 726 748 0.97

6 7 1.2e-05 0.0013 20.1 3.3 1 23 754 776 754 776 0.99

7 7 7.5e-05 0.0086 17.5 0.4 1 22 784 805 784 805 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	2.1	2.4e+02	3.5	0.1	2	11	28	37	27	40	0.87
2	7	4.1	4.7e+02	2.6	1.2	1	23	186	209	186	209	0.93
3	7	3e-06	0.00035	21.9	3.2	1	23	486	508	486	508	0.96
4	7	2e-05	0.0023	19.3	4.6	1	23	514	536	514	536	0.99
5	7	1.6e-07	1.9e-05	25.9	2.9	2	23	727	748	726	748	0.97
6	7	1.2e-05	0.0013	20.1	3.3	1	23	754	776	754	776	0.99
7	7	7.5e-05	0.0086	17.5	0.4	1	22	784	805	784	805	0.97

Sequence Information

Coding Sequence: ATGAGAATCAAAATGCCAGCAGTTAGGATTGCACAAGTAGATGCAGATGGAGCAGAAGGAGACCAACACCAAGACATCCTCACCTGTGGCGTGTGCGAAAAGTCTTTCGTACTTTCCGACATTGTTAGATTTATCCAGCACAAAGTGAGTTCCTGCAATAAAGAAAACTTCGGCCAGTGTTATTCAAATAATGACCGAGAGAGAGAAAACGATGATGGTAACTTACCATTATCGACAATCAATACTAGAAGGCCCAGCATATCAGCACCAATTTCTAGCAAGAAAAATCTTGGCAATAGAGTACATACACCACCACCTGCTTCCCCAAGGTTACCCGCTCCAGGAGACTTGTGTGTCGATGGAGCAGCTTCTTCTACACCGAAACGGAGGGCATCCTCACCGTTGACAAGTTCCAGTCCTGATGAAGATATAAAACCGCTCATCAAACAAGAAAAAATGGATACCACTATGTCTTCTGAGGAAAATAGTTGCAAAAGGTCCCGAACCGAAGTAGCTGATGCTGAATCGAATACAACACATAGTGAACCTAGCAACTACGTATGCAGCACTTGCAAAGCTCGTCTACACTCAGCATGGAGATTGGTGCAGCATGTGCAGCACGCTCACGGAATCAAAATCTACGTAGAAAGTTCACCTACAAGTTTGAAAATCGGAAACAGCAATAACCATAGTGGGAGCAGTACAACAAGTAGCTCGTCAGGATGTTCTTCCGGTGGGGTGCCACCTCCCCCTCCAAATATGAGACACCATCTTCTACCACCTCCTGATATACATAATCCATTTGGTGTTGGTGGTCTACTGCGAATGCCTCTACCCCCTCTGAATCATGGTCCTGTACCACCAACACCCCTTTTCTCGCGACCAGAACACCATTATAGGATAGATCAATTGGTAAGCGAACAGTTTCGTCATCATGGATTGAATTTAGCTGCAGCTGCGGCAGCGGTTGCGGCTGGAAATGTTCCACCACCACCACCTCATACGAGTTTTCCATCACCAGCTGAAAGACTTACACCCATAAACAGTTTACCTCCCAGAGATAGAAATACACCCAATCAATCTCTAGCTTTGGAACCACAACTGGATTTTTACTCACAGCGGTTGAGGCAATTGGCAGGCACCACCAGCCCGGGGGCGGCTCAGGCGAGCTCGCCGTTACCCCGCAAGCACTCACCGCCTTTCGCAAGTCCTTCCCCTTCTCAGTTGCCGCCTACTTCTATCCCCAATAATGTCAGTTCCAGTAGCAGTACCTCCAACAATAAcaataactataataataataacaacagtAGTAATAGCGGAAACAGCAGCAGGCCTCCGAGTACATCTCCTCCTAACAAAAGTGATGAGCAGCTCATCAATACGCCGAGATCAGCATCTACCCCACCAGGTAAACCAGGATCTCCTAGAAACTCAACGTCAGCTGATGCTATCCATGCATGTGACTTCTGTGGCAAAAAGTTTCGTTATCAAAACAACCTCGAAGTACATCGCCGAACTCACACTGGTGAACTACCGTACAAATGCACAGTTTGTGACCACGCTTGTGCGCAGAATTCGAAACtgaaaaaacatatgaaaattcATCGAACTTCATTAGATCGTACTAGTAATGCAGGATCTGTAGAAACTGTAGATGGTGAAGACagtgaagatgaagaagaaatcGAAGACGAAGAAGAGGAAGAGGATGAACTAGAGGAAGAGGAAGCGGAAGATTTGAGTTTACCCAGTCAGATTCCAAAAAACGCAACGAATCCATCAGCTTCACTGGTAGGTGAACTGATGGATAAATTTGGCTTCAATAACATAGCACAATATAGTGAGGCTTACAAACAGGCCTTACAAGAATCCAACACAGCTATTAAACTCCATTTAGCAAGCAAAGACCGCGACAATAATAATACCAGTTTGTCCAGTCAATTAAAAATCAAGGAGGAATTTTCCAAGATGATATTACCTGGTCCTCCACAACAACCTCTTCCACTCTTTCCTCCATTCAATGATTCCTATGACGCATCCAAAAGACTGAAACTAGAATTGGAACGAAACGATTGGTGGTTATCAGGTTTACCCCGCGAAACCAAAGGAGGGATACCAGGCCCAAGTGCGTTACTTCCAAATCCATTGATGAAGAAGGAATCGCGGAGAAATGATACTTGTGAGTATTGTGGTAAAGTGTTCAAAAACTGTTCGAATCTGACTGTTCACAGAAGATCGCATACCGGCGAAAAACCTTATAAATGTGAGCTATGTTCCTATGCTTGTGCTCAGAGTTCAAAACTGACGAGACACATGAAAACCCATGGTAGGCTAGGAAAAGACGTGTATCGTTGTAGGTTTTGTGAGATGCCATTTTCAGTTCCTTCAACCTTGGAGAAGCATATGAGAAAATGTGTAGTGAATCAGGGAAAAGGTCATCTACTCAGTTCACTACCCATGTTGTCGGGCGATGAAGATTCATCTACAAGCATCACTTCCAAAGAGGCAGTATGA
Protein Sequence: MRIKMPAVRIAQVDADGAEGDQHQDILTCGVCEKSFVLSDIVRFIQHKVSSCNKENFGQCYSNNDRERENDDGNLPLSTINTRRPSISAPISSKKNLGNRVHTPPPASPRLPAPGDLCVDGAASSTPKRRASSPLTSSSPDEDIKPLIKQEKMDTTMSSEENSCKRSRTEVADAESNTTHSEPSNYVCSTCKARLHSAWRLVQHVQHAHGIKIYVESSPTSLKIGNSNNHSGSSTTSSSSGCSSGGVPPPPPNMRHHLLPPPDIHNPFGVGGLLRMPLPPLNHGPVPPTPLFSRPEHHYRIDQLVSEQFRHHGLNLAAAAAAVAAGNVPPPPPHTSFPSPAERLTPINSLPPRDRNTPNQSLALEPQLDFYSQRLRQLAGTTSPGAAQASSPLPRKHSPPFASPSPSQLPPTSIPNNVSSSSSTSNNNNNYNNNNNSSNSGNSSRPPSTSPPNKSDEQLINTPRSASTPPGKPGSPRNSTSADAIHACDFCGKKFRYQNNLEVHRRTHTGELPYKCTVCDHACAQNSKLKKHMKIHRTSLDRTSNAGSVETVDGEDSEDEEEIEDEEEEEDELEEEEAEDLSLPSQIPKNATNPSASLVGELMDKFGFNNIAQYSEAYKQALQESNTAIKLHLASKDRDNNNTSLSSQLKIKEEFSKMILPGPPQQPLPLFPPFNDSYDASKRLKLELERNDWWLSGLPRETKGGIPGPSALLPNPLMKKESRRNDTCEYCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQGKGHLLSSLPMLSGDEDSSTSITSKEAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01290764;
90% Identity: iTF_00328632;
80% Identity: -