Gqui004058.1
Basic Information
- Insect
- Gonioctena quinquepunctata
- Gene Symbol
- gcl
- Assembly
- GCA_018342105.1
- Location
- JAFIRS010000617.1:411253-418083[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-18 3.1e-15 57.4 0.0 2 108 58 165 57 167 0.86
Sequence Information
- Coding Sequence
- ATGGGCGCAAAATTTTCGACGCAAAGCTTAGTGGACAATGTGACTGGCTATGTCACTGGAAAGAAAAGGAAACACTCGGAGTCCGAAGAAGAACAAATCAACAAAGTTATCGATATCGCTCTTCACACCCCCAAAAGGAAAAAACTTATCAGTACGGCAAACTACATCTACCAGGCCCTTTTTGTGGAAGGAAAAAATTCCGACGTGACAGTTTGCGCTCTGGACCGAGAGTTCCACTTACACAGAGTGTATCTGTGCCAGAGCCCGTATTTCGCTAGTATGTTTGGTGGATCGTGGCTTGAGACGACTCAGAAATATGTCACTATAGACATTGTCGATCCACTTATAACAATCAATTCTCTTAAAGTGGTACTGGGATCTTTGTACAACTGCGAAATAACGCTGAATCCTCTCGAAATAGTTCCCATACTAGCTACAGCCACAATGTTTCAACTAGACGGGTTAATTGACAAATGCACAGAGGTTATGCTGGAAACTATCAATCCCAAGACTTCATTGGACTACTACAATGCGGCCTGTCAGTACGGCGACAAGAAACTACAAGAAGTTTGTTTCAAATGGTTCCTGGTGAACCTGATGCCCTACTATTTCAGCCATCCGCTCTCGAGCCTCAAAACCATTCCGGTGTCGCTCATGGGTAAACTAGTCGCCCATCCCGACCTCTTTGTCATACAAACCGAGTATTCCATTTACGTCATGTTGAAGTACTGGATGTACATGCATTTATTTCCCGACTGCGAAGAACCCACCATAGCGATGGTTAACGAGTATTTTTGTACCAGAACCGacaaaCTTCCTTATCTGCTCTCAAGAGAGGGTAAACAGTTCATATCAGCATTTGAGGGCCTCAGGTTGCAAAACTTGATCTCGCACCAGTTAGACGTAGTGTTGATAATAAGAGACAATATCATTCCTCGAATAATGCTGGATCCGGTCATTTTGCAACAGTGGAAGAATGTTCTGAGGGTTAATCAGAACGATGACAAAGGTCCTATGGAGGTAAGTGACGAAGTATTCCTAGCGAGCAGTCTGAGATGCGGCAGGGTGTTATCCGTCAATGAAAGGCATGTCTGGAGGTGGACGGGATTCCATTTCGGAGTCGACTTACTCATGATCACCGACGGGGTTACTCTCTCTATCAAAAGGAACCACAGGTCGGAGTTTGAACAACTATTGAGCCTTCAAACGACAAGGCATGTCGCTATAAGAGTGACAGTAGCGAGGCTCAACGAGCAGAGACAGATCGTGTACACGAAACAGTCGGATATACTGAAAGTGGCGCTCAGTAAAGGGGAGGAGACCCAGATCATATCGTTCGATAACGATCTGGACTACCCTATCATAATATCGGCCAATATTTTGTACACGTCGCTGGAAACGCAGGAGAGCGCATCGGAAGAAAGCAGGCAGCCTACCGATTTATAA
- Protein Sequence
- MGAKFSTQSLVDNVTGYVTGKKRKHSESEEEQINKVIDIALHTPKRKKLISTANYIYQALFVEGKNSDVTVCALDREFHLHRVYLCQSPYFASMFGGSWLETTQKYVTIDIVDPLITINSLKVVLGSLYNCEITLNPLEIVPILATATMFQLDGLIDKCTEVMLETINPKTSLDYYNAACQYGDKKLQEVCFKWFLVNLMPYYFSHPLSSLKTIPVSLMGKLVAHPDLFVIQTEYSIYVMLKYWMYMHLFPDCEEPTIAMVNEYFCTRTDKLPYLLSREGKQFISAFEGLRLQNLISHQLDVVLIIRDNIIPRIMLDPVILQQWKNVLRVNQNDDKGPMEVSDEVFLASSLRCGRVLSVNERHVWRWTGFHFGVDLLMITDGVTLSIKRNHRSEFEQLLSLQTTRHVAIRVTVARLNEQRQIVYTKQSDILKVALSKGEETQIISFDNDLDYPIIISANILYTSLETQESASEESRQPTDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00328375; iTF_00110726; iTF_01310722; iTF_01296645; iTF_01014791; iTF_01227469; iTF_00886608; iTF_00166226; iTF_01047570; iTF_00056756; iTF_01290552; iTF_01369949; iTF_00329790; iTF_00722252; iTF_00735961; iTF_00911225; iTF_00244415; iTF_00740172; iTF_00330867;
- 90% Identity
- -
- 80% Identity
- -