Gqui001696.1
Basic Information
- Insect
- Gonioctena quinquepunctata
- Gene Symbol
- Hr39
- Assembly
- GCA_018342105.1
- Location
- JAFIRS010000711.1:335267-443889[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.11 2.2e+03 -1.2 4.8 51 142 205 289 163 329 0.54 2 4 3.5e-08 0.00066 20.3 0.0 1 21 393 413 393 427 0.90 3 4 0.017 3.2e+02 1.5 0.0 82 117 449 484 418 510 0.74 4 4 7.8e-73 1.5e-68 233.2 0.1 205 408 524 722 512 722 0.97
Sequence Information
- Coding Sequence
- ATGGCAGCAGACATGAGGTCACCGAACATTTCCGTCACGCCGATCAACATGGAGCCGTATCCTCCGCCGCCGCCCGTTCTCGTCAACGGGGCGGACCACCATCCACCCTGCGAGCCGCCCCAACGGACGAGGAGCGCCCCCCATCCTGCAGCTTTAATTTCTAACGGTAACGTTGACGTTTTGGATAGTTCAGATGCGGAAGTAGCTGGTATAGATTTTCACGCGGTGAATATGAGATCTAACAAGAAAAAACGAGATGACATTCCGAGGCCGATGAGCTGGGAAGGGGAACTTTCAGACGGTGAAAGAGATGGTATGTGCATCGATGAAGAAAATTCAACACAGGTACCGGAGAATCTATCGTTAGGCCACTCGAAACCTCCAATCATAAACGACACGAAAGATAGTCCTATTCTCCGACTGAAACAGCCACCGATGGGCAACTATTCCTTGCACAGCACGCCGAGCAACTCACCTTTACTTAGTCAACGGCATCCTGTTACAGGTGTACCGATCATAAGCCACAAGGATCTCATGCATAAGGCTCTGAACGTTCCTCCAACGCCGAGTCCCGATTCGGCGATCCATTCGGCCTACAGCGTGTTCAGTTCGCCGAATCAGAGTCCTTTGACGCAGCGACATATCACCCTTACCCCCAACCTGAGCAGAAACAATAGCGACGCATCCCATTCGAGTTGTTGCAGTTACAGCAGCGTGTCCGTTTCCGTGTCGCCGACGCAACAGTTTTCTCCCACCCATAGTCCCATACAGGGCCGGCATATGCACAGTGTCCACAGCAGCCCCCTCCACCATCACCACAACCTGCTCTACCGGAGCCTCCAAGACGAGAACATCCAGTACACCGCCGAACACGAAACCCTCGAGGAATCCGAAGACAAGACCGGCCTAATCCACACGTCACTGCCCGCCCAGCCGGGCATATCTCGACAGCAACTCATAAACAGCCCGTGCCCCATTTGCGGCGACAAAATATCCGGCTTCCACTACGGCATTTTCAGCTGCGAATCGTGCAAGGGCTTCTTCAAGAGGACGGTGCAAAACAGAAAGAATTACGTTTGTCTGAGGGGGGCGCAGTGCCCCGTCACGGTGGCCACGAGGAAGAAATGTCCGGCCTGTCGGTTCGATAAGTGTCTGCAGTGTGGAATGAAATTGGAAgCAATACGTGAGGACAGAACGCGCGGAGGCAGGTCGACATATCAGTGTTCGTATTCGTTGCCCCCATCTTTGACCGGCCACGGAGAATTTAGGGCGAGTACGACTGACTTGAGGCATGGCATGGGCGACGGCAATTCAGGACTCACAGTCAAACTGGAACCTCCCGATTCCAGTACATCGCATCATAAGCGAGCTACATATCCAGGTTCGAAAGGTGTCCCACCGTTATTGCAGGAAATAATGGATGTGGAGCACCTTTGGCACTACAGCGAAATGGAACTGAATAAACTCAGCACGGAGGGTCACCTGGGCAAGGAAGGGTCCAGCGGGGCAGTGCACAATCTTTCCACCCATCCTCTATTGGCCGGGACAGCATTGGCTGGTTCGACGGATACGAATCCCGATTTCGTAGCGAATCTCTGCAATATTGCCGACCATAGACTTTACAAGATTGTGAAGTGGTGTAAAAGTCTTCCATTATTCAAGAATATATCGATTGATGACCAGATTTGTTTGCTTATCAATTCTTGGTGCGAACTACTCCTCTTCTCGTGTTGTTTTCGTTCGATGTCCACTCCGGGGGAGATAAGGGTGTCTCTCGGGAAAAGCATAAATCTCGCCCAGGCCAGAGAAATGGGTCTGCAACCTTGTATAGAGAGAATGTTGAATTTCACGGAGCAACTCAGAAGATTGCGGGTGGACCAGTACGAGTACATCGCGATGAAAGTTATCCTTCTCTTAACGTCCGATACTTCCGAGTTGAGAGAGGCAGAGAAAGTGCGGGTGTCCCAAGAAAAAGCTTTGAAAGCTTTGCAAGATTACACTTTGTCACATTATCCGGAGAGTCCTTCCAAATTTGGGGAATTGCTCCTGAGAATTCCCGAGTTGCAGCGAACTTGCCAAgTGGGAAAAGAGATGTTGACTATCAAGTCGAAAGACGGAGAAGGACCCAGCTTCAACCTCCTCATGGAACTCCTGAGGGGAGACCACTGA
- Protein Sequence
- MAADMRSPNISVTPINMEPYPPPPPVLVNGADHHPPCEPPQRTRSAPHPAALISNGNVDVLDSSDAEVAGIDFHAVNMRSNKKKRDDIPRPMSWEGELSDGERDGMCIDEENSTQVPENLSLGHSKPPIINDTKDSPILRLKQPPMGNYSLHSTPSNSPLLSQRHPVTGVPIISHKDLMHKALNVPPTPSPDSAIHSAYSVFSSPNQSPLTQRHITLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHMHSVHSSPLHHHHNLLYRSLQDENIQYTAEHETLEESEDKTGLIHTSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAQCPVTVATRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLTGHGEFRASTTDLRHGMGDGNSGLTVKLEPPDSSTSHHKRATYPGSKGVPPLLQEIMDVEHLWHYSEMELNKLSTEGHLGKEGSSGAVHNLSTHPLLAGTALAGSTDTNPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSINLAQAREMGLQPCIERMLNFTEQLRRLRVDQYEYIAMKVILLLTSDTSELREAEKVRVSQEKALKALQDYTLSHYPESPSKFGELLLRIPELQRTCQVGKEMLTIKSKDGEGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00753059;
- 90% Identity
- iTF_01014531;
- 80% Identity
- iTF_00755873;