Gqui007016.1
Basic Information
- Insect
- Gonioctena quinquepunctata
- Gene Symbol
- bab1
- Assembly
- GCA_018342105.1
- Location
- JAFIRS010002666.1:63574-69611[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-14 5.1e-12 46.4 0.1 2 45 350 393 349 393 0.93 2 2 6.3 1.2e+03 0.4 0.6 6 17 460 472 456 475 0.81
Sequence Information
- Coding Sequence
- ATGGCTACAGCACAACAATACTGCCTCCGATGGAACAACCACCGCTCAAACTTACTGACAGTGTTTGATGAACTTCTCCAGAACGAAGCTTTCACAGACGTAACTCTAGCTTGCGAAGGGGGCATCCCCATCAAGTGCCACAGGATGGTTTTGGCTGCCTGCTCCCCCTATTTCCAAAATCTGTTCACAGGTTTACCATGCAAACATCCTGTTGTAGTACTGAAAGACGTCAAATATTCGGAAATCAAAGCAATATTAGAATATATGTATAGGGGAGAAGTCAACGTAGCTCAAGACCAGCTAGCCGCTCTGCTCAAAGTCGCTGAGGCTCTGAAAGTCAAGGGACTGGTAGAGGAGAACAGGTCGACCAGATCCCCGAAGGAGCAGTGTCAACCACTCGATCACTCTCCCTCCATAACAACTTCCAACACCACCATGCAAAACACTGTCCATAGCAGTAGCAGCAATAATTCACCGCCTCATTCGACGAATACTCATTACAAAAACCCATACAGCTTATACAACAATAAGCCTCAAGACTCGCGGCTGAACATCCCCATGTGGGCTGTACCTGGGCTACCTTTGCCACACCATCCGAATCCAGTTCCCAGCGCCAATCACCCGACCACTTCAACGATGTTGAATAATTGTTACGACATTGCCAGCTCAGATATGTCGCCGTTGAAAAGGAAGAAGCTCTCGAGTTTACTGATGAACAGGGATACACCAATTTTGAGGACAGTACTGGGACAAGGTCAGGCTGATTCATCTCAACCGGTCAGTTTGGTCTGTCATTCGGATAATGGTGATCATCCGAATGGCAGTGATGATAGACTTATAAAGCACTTGAAGAACGAACCTTCCGAGGACGCTCAATCACCATATACCGACTTCACACCCATAAATGACGAGGATGATAAATCAAAACTGGCTATCCCCTCCTCCTCACCTCAATCTTTCAGTCACGATATGAGAGGGGTGTCTTCTGGCATCGCTAGCTACGTTCCTTCGCCAAAACCCGAATGGAAACGCTACAAGCAATATACTAGAAATGACATACTGTCAGCCATAGAAGCCGTGCGAAACGGAATGTCAGCCCTACAAGCAGCCAGAAAATACGGAGTGCCATCTAGAACTTTGTACGATAAGGTAAAGAAACTAGGGATAACAACCAGTAGGCCATTCAAGAGAGGAAGCAATGGAAGTTCCAACTGCTTCCCCTATGGTACTGGATCTCCCTATGGTGGCCATCTCTCAGAGACTGACGACGGTCCTATGAATAACAACTCTGCTTTGTTGGAAGCCAGCACTTTCCTCCAGCATGCTCTAGACAGTAGAGGGGGCGATGAACGTGAAGCTTTGGCTGCAATGGCAGCAGCTGCGGCAGCACACGCTGTAGCTTCGGGCCATTCAACTAGCCCCAGCAACCATGGTCGAGCAAGGAGCCCAAGCCCCAGCCCCACTATGCTAAAATACATGCGACACGCCAGTTTAACCCCATCGCCTGCTCCTGGCAGTGATCATCATAATTCTCACAGTGAAACTAACGGCAGCTCAGAAAGAGATCATGAGGATGACGAAGACCAAGTGGAAGACCTTTCCATAGCGAGAAAGGAAGTAAGGGAACCCACTAGAGTCATCATGCCACCGATGAACCAAATTTCGGCAATTATGAAAAAGGAGGAGCTCTTGATCGACAGCCTCAAAGAGGAGGCAAGGAGGGAGACCCTCAAGTGTGAAGGGGAATAA
- Protein Sequence
- MATAQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLACEGGIPIKCHRMVLAACSPYFQNLFTGLPCKHPVVVLKDVKYSEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRSTRSPKEQCQPLDHSPSITTSNTTMQNTVHSSSSNNSPPHSTNTHYKNPYSLYNNKPQDSRLNIPMWAVPGLPLPHHPNPVPSANHPTTSTMLNNCYDIASSDMSPLKRKKLSSLLMNRDTPILRTVLGQGQADSSQPVSLVCHSDNGDHPNGSDDRLIKHLKNEPSEDAQSPYTDFTPINDEDDKSKLAIPSSSPQSFSHDMRGVSSGIASYVPSPKPEWKRYKQYTRNDILSAIEAVRNGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGSNGSSNCFPYGTGSPYGGHLSETDDGPMNNNSALLEASTFLQHALDSRGGDEREALAAMAAAAAAHAVASGHSTSPSNHGRARSPSPSPTMLKYMRHASLTPSPAPGSDHHNSHSETNGSSERDHEDDEDQVEDLSIARKEVREPTRVIMPPMNQISAIMKKEELLIDSLKEEARRETLKCEGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01295881;
- 90% Identity
- iTF_00755893;
- 80% Identity
- iTF_00755893;