Gqui027821.1
Basic Information
- Insect
- Gonioctena quinquepunctata
- Gene Symbol
- bab1
- Assembly
- GCA_018342105.1
- Location
- JAFIRS010000008.1:940669-1119399[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.2e-10 2.3e-08 34.7 0.0 1 39 390 429 390 433 0.90 2 4 3.3e-12 6.2e-10 39.7 0.1 1 39 444 482 444 485 0.95 3 4 1.2e-17 2.2e-15 57.2 0.0 1 45 499 544 499 544 0.98 4 4 1.7e-15 3.1e-13 50.3 0.0 1 39 551 590 551 593 0.94
Sequence Information
- Coding Sequence
- ATGGAGGACGGGCAACATTACTGCCTACGATGGAATAATTACCAAAGTAATATGACATCGGTTTTTCACCAATTACTCCAAAACGAAGCTTTCGTTGATGTAACATTGGCCTGTAATGATTTATCTTTGAAAGCCCACAAGGTAGTCTTATCTGCCTGCTCGTCGTATTTCCAAAAGCTGCTCTTAGAAAACCCCTGTAAACATCCGACGATAATAATGCCGCAAGACGTAGGCTATGCAGACCTGAAATTCATCATTGAATTCGTCTACAAGGGGGAAATCGACGTGTCTCAGGCTGAACTACAGTCTCTCCTGCGAACGGCGGACCAATTAAAGATCAAAGGCTTGTGTGAAACGACCGACGACAAAGAGTTTTCTGAATTACCTCCAGGGCTCCAGGGTACCAACAAGAGTGACAACAATTCTCCGACGGCTGTGCTAGAATTCAAGGTTCAAGACAATAATGCGCCAGTGAAATTCAAGAGAACGGGCCTACCGCCAGAACTACCTACACCCACGAATGAAGCTGAATCTGGAGATAAAGCGGACGACGCAGAAGACCAGTCGACGGAAAACGAAGAAAATGATATGCCAGTAGCTTTGGATGAACGCAAAAGAAAAAGGCCCCATCAGCCGGAGCAGACCAAACCACTAAACATGAGCAGCCATGGACTCCTCTCCGGACAGACAATCTTCTCCCAGTTCGGAGTGGACACCGACGATTTCCCACCGGAACCACCCGCGCCTTCGGCCATTCCCGTGGGTCACGTGGACATGTCCAACGCCGATCATTCCCCCACCCGCACCCTCCTCACAACGCCCATCCACCGAATGGACATTTCCGATTCCACCAAGTATACGTTGGACATCAAAAAAGAAGCCGACATCAAGTTCGAAACGTTGCGGTCCTACGACCAGGACAGTTTGCTGGATATGGAGTCGCACATGTCAGGTCCGGACCATTCAATGGATAGCCACGAGGACGGGGACAGGAGCATGCATCAGGGGATGATGGGACAAGCCGATTTCGGAGGGATGTTGCCTGGAGTTTCAAATAGATTAGatttAGATAGTAGTGATGAACAAGTACCTGGAATCAAAAATGGCCATAATGAAAACATGCCCACCCCGCCTCGGACACACGCAGGTGGTGGACCAAAAACGTGGACTCAGGAAGATATGGACATGGCTTTAGATGCCTTAAGAAATCACAATATGAGCCTTACCAAGGCATCTGCAACTTATGGTATTCCCTCCACTACTTTATGGCAAAGGGCACATAGATTAGGAATAGATACACCGAAGAAAGAGGGCCCTACCAAATCCTGGACCGAAGAAAATCTCAACAATGCGCTGGAAGCCTTGAGAACTGGTACAATCTCTGCTAATAAGGCTAGTAAAGCATATGGTATCCCTAGTAGCACTTTGTATAAAATAGCGAGAAGAGAAGGAATAAGACTGGCGGCACCATTCAATGCGGCACCGACAACATGGACACCCGAAGATTTAGAAAAAGCGCTAGAATCAATCAGAACCGGCCAAACCTCAGTACAAAAAGCCTCTACCGAATTCGGCATTCCCACAGGAACCCTTTACGGAAGGTGTAAGAGAGAAGGAATAGAACTATCCAGGTCAAATCCGACGCCTTGGTCCGAGGATGCAATGGGAGAAGCACTGGAGGCTGTTAGGTTAGGACATATGTCCATCAATCAAGCAGCTATTCACTACAATTTGCCTTATTCTTCACTCTACGGACGATTCAAACGAGGAATCAAATATGACCCTGACAATGTTGATATGAACGCAGACAGTCAGTTACAAATGGATCATTCATTTGGAATGGAATATGCTACCTCTCCTTCTCAAATCCAATATCAGAATCAGAACAGCTGA
- Protein Sequence
- MEDGQHYCLRWNNYQSNMTSVFHQLLQNEAFVDVTLACNDLSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVGYADLKFIIEFVYKGEIDVSQAELQSLLRTADQLKIKGLCETTDDKEFSELPPGLQGTNKSDNNSPTAVLEFKVQDNNAPVKFKRTGLPPELPTPTNEAESGDKADDAEDQSTENEENDMPVALDERKRKRPHQPEQTKPLNMSSHGLLSGQTIFSQFGVDTDDFPPEPPAPSAIPVGHVDMSNADHSPTRTLLTTPIHRMDISDSTKYTLDIKKEADIKFETLRSYDQDSLLDMESHMSGPDHSMDSHEDGDRSMHQGMMGQADFGGMLPGVSNRLDLDSSDEQVPGIKNGHNENMPTPPRTHAGGGPKTWTQEDMDMALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNNALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRTGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYDPDNVDMNADSQLQMDHSFGMEYATSPSQIQYQNQNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00056463;
- 90% Identity
- iTF_00755904;
- 80% Identity
- iTF_00755904;