Gfla021570.1
Basic Information
- Insect
- Gonatopus flavifemur
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_018340375.1
- Location
- Contig23:112547-119759[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.1e-112 9.4e-108 360.4 39.5 1 300 29 319 29 319 0.95 2 3 0.0061 1.4e+02 1.9 2.7 122 171 319 368 318 371 0.87 3 3 0.012 2.7e+02 1.0 6.2 193 238 349 393 331 394 0.64
Sequence Information
- Coding Sequence
- ATGGAGTCTTCGGTGGCTGGAAGAAGACGAACGGCAGCGAGACATTCGGCGGAAGACCAAGCCCTCGATCAAATAGCCAAAGAGGCGGAAGCAAGATTGGCTGCTCGACGACAAGCAAGAGCAGAGGCCAGAGAGATTAGAATGCGAGAGTTAGAAAGACAACAAAAAGAAGCTGAGGAAAATGCAGATAGAGTTTACGATATGTGTTCAGCCGATGCGAACAGAGCTATGAGAGTGACTCCGGATCCTGTGAGGACTTCGCGTCTACTTACAAATTCAAATAATTTCCAATCAAGTCGTCGTTCTTCTGAAGATTCTTTAGAAGATGCAGGACTCAACAAGGATCTTAAAATAGAATTAAAAGAATTTGAGGAAAAGTTTAGAAAAGCGATGATCGCCAATGCTCAGTTAGACAACGAGAAATCATCTTACGCCTATCAAGTAGATTTATTGAAGGATAAGTTGGAAGAATTAGAGGAAACTACTGCTCAGCTCAGAAGAGAGCTCAAAGAAAAAAATCGGGAAGCTGAACAATTGAAGAGAATTAGTCTTAGATTAAAAGAAGACTTCGAAACGTGTAGAGCACAATTGTTAGAAAGAGATACACTTATACAAGAAAATGGGCTAGTAATAGTCGAAGATGAAGGAAGTGATAACGAAGAAACTAACATAAATAACGGTCCGTATCATAGAAAAAGAGTTCTAGTCAGTACGGAAGCTGCGGAACTATTACAAAATGCTGGTGAAGGTTCATTAGACGTTCGATTGAAAAAATTTGCTTCAGAAAAAAAGGAATTACAAGACGAAATAAGACATCTAAGGTTGGAATTGGAAGAAGCTAGAAGTCGCGTGAGGTCTGAAAAATCACAAGATTCCGAAGATGTTCAACGCGAAGCAAACAAGTTATTGGCAGACTACAAATTTAAATTACAAAAAGCGGAACAAGACATGTCGACGTTGCAGGCAACGGTAGCCAGGCTAGAGAGTCAAGTCATTCGTTATAAGTCTGCTGCAGAAGCATCAGAAAAAGCTGAGGATGAATTGAAAGTTGAAAAAAGGAAATTACAGAGAGAAGTCAGAGAGTCACAAGACCGAGTCGAAGAACTAGAAACGGCAAATTCTCATCTTCAAAGGCGGTTAGACAAACTCAAAAATGCAAAATCTACGCTATTGAAAGAGCTTTGA
- Protein Sequence
- MESSVAGRRRTAARHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCSADANRAMRVTPDPVRTSRLLTNSNNFQSSRRSSEDSLEDAGLNKDLKIELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETTAQLRRELKEKNREAEQLKRISLRLKEDFETCRAQLLERDTLIQENGLVIVEDEGSDNEETNINNGPYHRKRVLVSTEAAELLQNAGEGSLDVRLKKFASEKKELQDEIRHLRLELEEARSRVRSEKSQDSEDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQDRVEELETANSHLQRRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- -
- 80% Identity
- -