Gfla020021.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Gonatopus flavifemur
Gene Symbol
PAXBP1
Assembly
GCA_018340375.1
Location
Contig1:60750085-60766298[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.1e-29 3.5e-25 89.5 3.1 3 272 424 632 422 634 0.90
2 2 0.077 8.7e+02 -0.4 0.0 42 92 1052 1102 1044 1110 0.85

Sequence Information

Coding Sequence
GTTAAAATAAAAAACACAGGACCTTTAATTTTAAATGGACGCGCTGCGTTGGCAGCAGGTAAGGATGACTATACGTCCGAGGAAGAAGAAGAAGAGCCTCGTAATCATAGATTTCGTAAGAATACAGATAAAGCAGATACTATGAAAATCCTTCTTGAAAGTGGTTGTATACCCGATGCTGCAATGATTCATGCTGCTAGAAAACGAAGACAAAAAGCAAGAGAATTAGGACACGATTATATTCCAATTGAAGAGCAAAGCGAGGATAAAGGAAAATCTAGGCTCATTAGAGAGGAAGATCATGACAGAAGTGACGATGATGACTCTCAGGATAGAATTGATATGTCTGTGAATACAGAAGCTAGAGATAAAGAAAAAAGGAGAGAAGCATTTCTTGCTTCACAAATGCCTATTAAACTTTCTGACGATGAAAGTGAACATGATAACGAAGAAGAGGAATGGGAAGCTCAACAAATTCGAAAAGGCGTTACCGGTGCACAGATTGCAGCGGTGCAACAAGATTCTATACTGCAACAACAATACTCCATGGGAATGAATGTAAATTCAATTATGGGACCAGGAGTTCCATTAGAAATTGTGATGATGCCAGCTCCCCCACCACCGCCAATGATTCAACCACCAGACCCAACTAAAATAGTGCCAATTTCCCCAGCAGAAGTCGTTAATAAAATGCAAGAAAGATTAAATACTCTGAAAGATATACTCAGACGGCCTCAATTAGACCGAGATCGTTTGGAACAAGAAAGTCATCAGACTGTGAAAGAGTTGGACGAAGGTGAAAATTGTGCGCCGCAGCTGGCACAGCGCTTCAGATATTACCAAGAGTTGCGTGGGTATGTCACTGACTTGGTAGAGTGTCTTGATGAGAAGCTGCCTCTGGTTGCTGGATTGGAGCAACGCTGGCTAGAACTTTACGGAGAACGCGCTACCGAGCTAATGGAAAGAAGACGACAAGATACAAGAGATCAAGCTGAAGAAATCACTACCGCTGCAAGAGGGAATCCCATACGAAAAGGGCCAGAAATTGAAGCACGTATTCGCCGGGTTACTGAGAGAGAAGGAAGAAGAGCTAGACGCAGGAGAGCTAGGGAACTTGCACCCACGTTACCTAAACATATTGACGGCATGTCCAGTGACGATGAAGTTACTGAACAACAAAATCTTGCGTTTAAACAAGCGAAAGAGGAAATCGATAAGGAGAGTCAAGAAATATTTGCAGATGTGATGGATGATTATTGTACTATCAGTGGAATTCTTGCTAAATTGGAGTCATGGCGAGAAACAGATATGGATTCTTACATGGAAGCTTACGTTCCATTATGCATACCTAAAATTTTGTCACCTCTCATTAGATTGCAACTTATGTGTTGGAATCCTATCATGGAAAGTGCAGATATTGAAAGAACTAAATGGTACAACGCTTTACTTCTGTATGCTTTGAATCCAAAAGAAACGGAAGAATCTTTAAAGCAAGATCCTGATGTGAGATTAGTACCATCTGTAATTGAGAAAATCATAATTCCAAAATTGACATCTATTGTTGAAAAAGTATGGGATCCAATGTCTACTTCACAAACCTTGAGACTTGTAGGAACTATAAATCGATTTATTCGAGAATATCCGAATTTGAATGAAAAGAGTAAACCCTTGGAAACGTTGTTGAACAGTATTTTAGAGAAAATTAAATCAGCTATCGAAAATGATGTCTTCATACCGATCTTTCCAAAACAAATTTTGGACACCAAACATGTATTCTTTCAAAGACAATTTGCTATGGCAGTGAAATTGTTACGTAATCTGTTGAGCTGGCAAGGCCTACTTGGTGATACGCAGTTGAAAAATTTAGCTTTGGGTTCGCTGTTGAATCGTTATCTTTTAGCTGGATTGAGAGTTTCTTCCACGGTAGATGCTCTCTTCAAAGCAAATATGATCATGAGTACTTTACCACGAGCTTGGTTGCACGGAGAAACAGTTGAACATTTACAGATGTTTGCTAAACTTATACAACAACTGAGCGAACAATTAGATCAGGCTAATCCGGCCCATAATGGAGTTTTGTTACCTTCGAATGCTGGATCTGCTTGGAATTTTCGTGGAAAACTTTTGCTTCAGTCGGAAAATGATTACGTTACCATACAGCTTTTATCCCTAAAAACTAGCGTATGGAATGGAAAAATAGGAAGAGAATCAAACGAAGCGAATATCGTGACTGATGCTAAGGAACTTCTCAAACCCTTTCGAGTTTCCTATAAAATGGGTCTCATTCAGAATTTGAGTACAGAGGTTGAGCCTATCTGGGCCACCAATATTAAACGTAGTATTGCAGGAATTTTACAAATGGATCTGGAAAATCTAGAAAAGCAAGTTGCTTTCAATTCTAAAGAGTTTAATCATTATGGTCACTGCAATATCGATTACGTGACAACCTTGGAAGTGCAAGGTGAAAAATTAGTCCGAAAGTTTTTAAATCCAACTGCATGTGAGGGACATGCACACAGATTTTGGAGTAATGTCCCTAAACTCTCTTGTTTTTCCGATAATCAGCATCCTATTGTAAAATCAAGTGAAAGACTTTACAGAATAAAACATGAAGGAGAGGAGCAGAATCTCGTTTTCATCAATGCAACTGGTGGAATTTATGTACAATCTTTCCAAAGTCTGGGAGAAGCGCAATTTCTTTTCACTAAGCAGACGTTCGAATTAATACATGTAAAAGATATATCGGATAAAATTTCTGTGAATGAATTACACCCAATGACCCTTCAACATGAATTACCAGATATCGATTTCACCCAAGGTAGAAATGTTCCTGATAAAACCGTTGTTTTCAAGTCTATAAGCGTTTTACTGGACCGCTTGAGTCAAAGAGTTGAACCCCCTGGTTTAGATACTGAAACCAGTAATCTTCATAATACCACGATATCGATCCTTCTTTATTATCTTGCCATGCTGAACACCGATGATTTGAAACTAGCTTATAATACTATCTCGGGTACGAGTTACAAGGAAGAGACAATTCGGAATATATTTCTCGAAACTCTACCACAAATTGGAACCAAAGCAGCTATTTTATTCATCGTGGAATTGGTTAAAAATAGGAAAGTATCCGATGTGACGGCTATTCAATTGTTGACACATTTACCTTTTCATGCAAGAGATCCTGATGTTCAATTACTGGTGGATCTACAATCAATTCTGAATATGCCTGAAAAGGTTGCATCCGAAGTTCAAAACACCGCTATCCTAATGTATGGTACATTGATTTACAAAACGTGTCTGCTTCATTGTCCGTATGAAATGCTGGATGATTACGTACGGCTCTATTTAGATAAATTCACGGAAAGTACGGATTATGAGAAAAAAATGATTTGGCTGGAAGGCTTAGCAAATATACAATTGGGTCGAGTGGTTGAATTTTTGGAACCTATAGCTAGTGGAAGTAATTCCGAAATACGTCATTTTCGCGTTCTCGCTGCTTGGGCTTCTCTACCCACGGCACCATCACGACCAGATATCATATATCCTGTATATTGGCCAATTTTAGTGAACAGGTCGGAACATTTGGAAATGAGAATTGCAGCATTGACACTATTGATAGTTTCCAATCCTACGCCAAGTAGATTGATTTCCTTATATTGGTACATGCAAAGCGAGCCTTGTCCACATCTCTATAACTATTTCTATACAACATTGAAATCTTTGGAACACACGTCGTATCCTTGTTACTCTCACATAGGAGAAATTGCTGCCCAATTCACCCGCGTGTTACGTAGATCATCAAATCACCAATATATCCTAACTGGAAATTATTTACTCGACTATCAAGATACATACAGGAAATTTGGGGCCATGTTGCATAACGTGGTTATAGCAAATCCAGTCACAAATCTCCCAGAAGTTTTCTATACGACTTTGAACAGTTATGGAATGGATACTAATTTGAATCATGTATCTCTGTATGTGAAAGGAGAAGGAATTTTGAACTCATTATCAACATATTTTGACAGTCCAACAAAGGTGAAAGATATACTAAAAAAATTCAAATTAGAGAATCCGCCTAGCGTTCCTTCCAGTCATTTGGAAATCATTGTGCGTTTTCAACAGAAAACTATTTTTTGCAAGCATTTGAATGAAACGAATATTCATACAGCTGTTCAATATTTGAGCGTGTTACCCGAAAATGCCTATCGTATGTATCAAAACATGGAATTTCACATTAATCAACAACGCATCAACGTATTTTTAACAATCGAAGATTTGCAAGTTACGGATTTAGGAACCAATGCTCGAATCGCAGCTCAAGCTACTTCTCTGTTTTCTATGAGAGGGAATTTCACTTACAATTCCTTGGGACGTAATAACCATGCTATTTTAAGTTCATCCGTTCATGTTACACAAACGATTGGAACTTACAATCCATTGATAGATGTATGGCACGGAGCGGAAAGAGCACAATCCATTCACGGATATTTCCCCTTGAATATTACCCTCGGTTTGGAAGAACGTCCATTTATATTATACAACACTCCAGGAGGATATTTGAGAGCGGGAGCTACAACTCACGCACGTACATCTACCAACATACGAGGTATCAAAGCTGAGTCCAAATTAGCACAGATATGTCCAGAATGTCAAAGGATATACATAGTAACCAAAGTTCCTTCTCCTAAATTACAGAAGAAAGACATACTCAAAGTACATCTCCCAGAACTCGGTGGACAAATAGAATTGAAGATCTTTGATTGTGAAAATTTAGTAAGTCGAGAAAAACTAATTAGAGACATGTTGTCTTCGCATCGTGCAAATTATCAAATATGGCCTGTTGCACAAATTATTTTAATGGGATTGCATGTCTTGGACTACTTCACTTACGTTCCTCCACATGGCAGTTGTGGATTGACAGCTTACATGGAAACGATTGATATTCAACCTTCTCAGGTAAAACTGGAGTACGCGCAAAATGGAAAACATCATGTCGTGTCTTTAACTCGTTCTGATCTACAATCGTCGAGTATGCTTCATCAATGGAATTTGGCTGCATTGTATGAATCGACGAGTTGGATATCCGATTCATTCAAACTCAAAGCAACTACGATCACCCCGGGACAAAAAGTCATGAAGATTTGTTTGGAAGTTGATAGAGATACTCCGTGGGAATGGGACTTTTTGAGTATCAAACCAAGCGATCCCATGCAAATTAAATTCAACTTAGTGTGGGGATTATCTGATACCGCAAAAGGAAAATGCGTTGGAGCTTCAGTTTTAATGAATTTTGTTGGCGAAATTAGCCAGAGGCAAATTGATGAAAATCAAAGGGACATTTGGCCTTATAAAAAATGCCGTGAAGAGTATGAAGGAAAGAGTTTTGTTCCTTACACGGAAGCTTGTTATCAAGTCTCGAAAGAATTATCCACTCTGAGGAAATATCAAATATTTACGCAGTATGAAAATTTACCAGATACTCTAACGAAATTCATCCAAAAATTACGAGCTCTTTATGAAATAATTGGTGGTAATAGTTCTATGATTGTACCGAATCAATTTCTATTTACTGGAGAATTTCCCAAAGAATCAGACATCGCGGAATTGCAATTCAACAATGATAAGATATCCATCGAATATAATTCAAATTTGGTAGATTATTTCTTACCTCGCACGAGAATTCATAAATTCATGGATGTTTTCTTCATTCGTGCATTTTTCAAAATATGTGTGGTGACTCCAGATTCTGTAAGATCAGTTTATAACACGACTGTTTCATTTGAGAAGAATCGTGAAATATTGGTATTTGGTCAATGTTACAATCAAAACCCAGGATATATCATAACGGCGAGAACAAGTGGGAATAATATAGATATAGAATTAACCGATGATACCGAAACCATTAAAATTACAAGTTATGAGAAAGGTGGACATGTGTATAATTCTACAACATACATGCCAATTGAAAGAAATTTCATTTTCCACAACATTAATTCTAAAAAAATTCGATTGGATGACACGACAGTCGATGTTTTGTTACCTGATTCCGTTTTATTCCTGCATTGGACCCAAGAACAAGTTCTACTATTCTTTCCAAGTCATGCATTAGAACTTGGCTGTGGTCTTTGTGCATTAAATACTCCAGTGACTGATAATTTATTCAAAGCGCTCGATTGA
Protein Sequence
VKIKNTGPLILNGRAALAAGKDDYTSEEEEEEPRNHRFRKNTDKADTMKILLESGCIPDAAMIHAARKRRQKARELGHDYIPIEEQSEDKGKSRLIREEDHDRSDDDDSQDRIDMSVNTEARDKEKRREAFLASQMPIKLSDDESEHDNEEEEWEAQQIRKGVTGAQIAAVQQDSILQQQYSMGMNVNSIMGPGVPLEIVMMPAPPPPPMIQPPDPTKIVPISPAEVVNKMQERLNTLKDILRRPQLDRDRLEQESHQTVKELDEGENCAPQLAQRFRYYQELRGYVTDLVECLDEKLPLVAGLEQRWLELYGERATELMERRRQDTRDQAEEITTAARGNPIRKGPEIEARIRRVTEREGRRARRRRARELAPTLPKHIDGMSSDDEVTEQQNLAFKQAKEEIDKESQEIFADVMDDYCTISGILAKLESWRETDMDSYMEAYVPLCIPKILSPLIRLQLMCWNPIMESADIERTKWYNALLLYALNPKETEESLKQDPDVRLVPSVIEKIIIPKLTSIVEKVWDPMSTSQTLRLVGTINRFIREYPNLNEKSKPLETLLNSILEKIKSAIENDVFIPIFPKQILDTKHVFFQRQFAMAVKLLRNLLSWQGLLGDTQLKNLALGSLLNRYLLAGLRVSSTVDALFKANMIMSTLPRAWLHGETVEHLQMFAKLIQQLSEQLDQANPAHNGVLLPSNAGSAWNFRGKLLLQSENDYVTIQLLSLKTSVWNGKIGRESNEANIVTDAKELLKPFRVSYKMGLIQNLSTEVEPIWATNIKRSIAGILQMDLENLEKQVAFNSKEFNHYGHCNIDYVTTLEVQGEKLVRKFLNPTACEGHAHRFWSNVPKLSCFSDNQHPIVKSSERLYRIKHEGEEQNLVFINATGGIYVQSFQSLGEAQFLFTKQTFELIHVKDISDKISVNELHPMTLQHELPDIDFTQGRNVPDKTVVFKSISVLLDRLSQRVEPPGLDTETSNLHNTTISILLYYLAMLNTDDLKLAYNTISGTSYKEETIRNIFLETLPQIGTKAAILFIVELVKNRKVSDVTAIQLLTHLPFHARDPDVQLLVDLQSILNMPEKVASEVQNTAILMYGTLIYKTCLLHCPYEMLDDYVRLYLDKFTESTDYEKKMIWLEGLANIQLGRVVEFLEPIASGSNSEIRHFRVLAAWASLPTAPSRPDIIYPVYWPILVNRSEHLEMRIAALTLLIVSNPTPSRLISLYWYMQSEPCPHLYNYFYTTLKSLEHTSYPCYSHIGEIAAQFTRVLRRSSNHQYILTGNYLLDYQDTYRKFGAMLHNVVIANPVTNLPEVFYTTLNSYGMDTNLNHVSLYVKGEGILNSLSTYFDSPTKVKDILKKFKLENPPSVPSSHLEIIVRFQQKTIFCKHLNETNIHTAVQYLSVLPENAYRMYQNMEFHINQQRINVFLTIEDLQVTDLGTNARIAAQATSLFSMRGNFTYNSLGRNNHAILSSSVHVTQTIGTYNPLIDVWHGAERAQSIHGYFPLNITLGLEERPFILYNTPGGYLRAGATTHARTSTNIRGIKAESKLAQICPECQRIYIVTKVPSPKLQKKDILKVHLPELGGQIELKIFDCENLVSREKLIRDMLSSHRANYQIWPVAQIILMGLHVLDYFTYVPPHGSCGLTAYMETIDIQPSQVKLEYAQNGKHHVVSLTRSDLQSSSMLHQWNLAALYESTSWISDSFKLKATTITPGQKVMKICLEVDRDTPWEWDFLSIKPSDPMQIKFNLVWGLSDTAKGKCVGASVLMNFVGEISQRQIDENQRDIWPYKKCREEYEGKSFVPYTEACYQVSKELSTLRKYQIFTQYENLPDTLTKFIQKLRALYEIIGGNSSMIVPNQFLFTGEFPKESDIAELQFNNDKISIEYNSNLVDYFLPRTRIHKFMDVFFIRAFFKICVVTPDSVRSVYNTTVSFEKNREILVFGQCYNQNPGYIITARTSGNNIDIELTDDTETIKITSYEKGGHVYNSTTYMPIERNFIFHNINSKKIRLDDTTVDVLLPDSVLFLHWTQEQVLLFFPSHALELGCGLCALNTPVTDNLFKALD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-