Basic Information

Gene Symbol
lilli
Assembly
GCA_018340375.1
Location
Contig1:68112536-68276524[+]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 0.2 4.4e+03 -3.1 1.0 4 25 7 28 5 33 0.80
2 9 2.4e-05 0.54 9.8 14.1 28 145 56 172 45 236 0.67
3 9 2.6e-11 5.9e-07 29.4 0.8 327 431 246 349 233 368 0.77
4 9 0.022 5.1e+02 -0.0 21.1 460 503 496 539 471 547 0.74
5 9 1 2.3e+04 -8.4 9.6 153 223 580 652 539 720 0.42
6 9 1 2.3e+04 -7.9 10.1 420 470 693 742 639 746 0.58
7 9 0.082 1.9e+03 -1.9 12.6 437 502 804 871 761 876 0.66
8 9 0.27 6.2e+03 -3.6 5.5 113 182 1111 1180 1010 1254 0.51
9 9 0.051 1.2e+03 -1.2 1.5 129 220 1296 1389 1267 1419 0.56

Sequence Information

Coding Sequence
ATGAAAAAACCACGCGTGGATCGGGACCGGCTTCGGGAGCGGGAACGACAGGCCCGTGCGGCCATGTCGGTCCAAGCAGAACAGGCGGCTGCGGGAGGTGGCGCCGATACCAGACATCATCATCACGGCCACCATAATCACGCCCATCATCATGCCAATTCCCACACCATCGCAGCACCGCTATTTCGTGCTCCCGTCAGGGTCAATCCAGATGCACAGGATCGCACGACCCAGCAGATCCAATCGAAGCTCGGCAATTATTCGTTGGTGAAGCAAATGGTGCTAGACGAGCCAAAGCGGTTGATAGGTATCGAGGGTGTACCGGCAAGTCCAGCCCCCTCTTTGGCTCCTCCATCATCGAGAACCAGTTCTGGGTCGGTGAGTTCAAGTTCAAGAAGCTCACCTTCCACGCAAGAGTTCAAAAAACCGGGCTCAGGACCAAGGACGGGTTCCTCGTCAACCTCCTCTTCGTCAACGAACTCTTCCTCTTCCTCGAATCATAGTTCCCAACGTGGTGGATTCGTAAAACCAGCGGATGGGAAACCACCGTACGGTGGGAGAGGCGGTTACCCGGGCCAACCGGTCAAGCACGCCGGTAACAGTAATGATCATCGAAGCCACGGTTTGTTACCCGCAAAAGGTCCACCGCCTAATTCGTCCGGTTCTTCCAATAATAGCTCCTCGATATCCGGACCCAACAACCACAATAACAATAGAATCTATTCCGCTGGCGTTCGATTAACTAGGATAAATGTCGATAATGGCTCAAATTCTAGGCATCTGACACCTGAAAATTCGGCTGATTTGGAGAACATTTTAAAGGAAATGACAATGCCACCCACACCTTTAACAGCTATCGCCCAAACCCCCAGGAAAGAGCTGGAATCGAAATTCACTTTCAACCCCGTTCTGGCGAAGTTAACTGAAGTCACCCCGGCGGATGTAGTAAAGCCTCAACGGGAGAGGCATTCATCTAATAGACTGTCTGCTGATTTGATAGAGCGAGATCTCAGTTTATCGGAAGACAGTGACGATGATGGGAATAAGCGAGGAGGATCATCGTCGAAAATACCAAGAGGCAATAGAACTCCGGATTTAACGGTCGATTTATCAACGCCTTTGATTCCTGCGATGACGCCAGCTCCACCTCCATTGGCTCCCATGTCACCGATGGGAATGTCACCGGAGGGGCCAATGATGTCCCCATCGAGACCTCTCGGTTCCCCCAAACAAACTTCCCCTGTGACAACGTCATTACAAACGGGAATAAAGTTACCACCGACCTCGTTGCTGTCCCCGCCGTCGCGATTGTTAACGACTCCACCGCCTATGGCGATCCCAAAAGAGATAACACCGGAAAGGACGTTGCATTCTTCGCCATCTCTTCAACCACCTCTCGGAGTTGGTCTACCGCCAGAACCGATCGGTAAAATATCCAGTCCTATAGCACACCACCATCACCTACAAAGGCCTCCGAGTCCCCCGGGAGAAGCACCTCAGAGTTCTTGTAGCGCCAGTTCTAGTTCAGATTCGGGTTCCGATACGGCGAGCGACAGCAGTGACGATTCCGAAAATGAACCAGATCAAACAACGATGAAAGGTCCGACGACACCTCCCTCCATTTCCCCCACAACGAACAATGTGGTCGAGGAACCTCTTCCCGCTGTAGAAGAGTCCAAACCGAGATGGAATCTCAGCAGTTTCTTCAATAAAACAGCCGTCCCTCATGGCGAACAGAATTCCGAGAGTAAACCTGTGCAGGGCGGAGGAAGGAGAGAGGGTTCGTCGGAACCAGCGTCAGAGCCAAAACGAACGCTTCGGGAGAAGAATCACGAGTGGCAGTTGGATGAGGCTGTAAAAAGAACTCGTAACGCTACGATGATGAGTCTCCTGATCGATAGCGAACCTCTCCCTCCGGACAGAGAAAAGTCTCAAGCGACGAGTGAGAACAATCGCGAGAGACCGGTAATAGAGAAACCAAAGGTACCGGATGGAAGGAAACGCGGTCGACCAAGGAAACCGAACAAAGTCATCAGTCCCAAAGAGAATCATAGAACCACCGAGGATACGGAGAAGAATTTGTCTAAATCTCGTAGTAGGTCGCGGGGATTCGGCGAGAGTCCAGCGAAGAAGAAGAAACCTATATCGAAACCAACAGTGCCGACGACCAGCGACGACGACAGCGACGAAAGACCTTTGGACGCTTCTAGCGATTCAGATAGCGATCGTAGACACAATCCTATCCCCCCGGTCGCGTTGAGGGATGCAGTTGAGAAACGTAGATCTAGACTAAGCGTATCTTCGAGCGACGACGAGGACGATGTTTCACCTCCGAATAAACGTAAACCAAGTCCATCCGGAGTTCGAGACGACGACGCGAGCAGAAGTTGGAGGAGAGTTTCGATAAAACGTAGTAAACTCGCCGACTCCCCGAAGAAACCCGAGAAGAAAAAGAGTCCAACCAAAGCGAAACCCAGAAGACCAAGGTCAAGGGTAACCAGTTTGGCTGGGGTTTCCGATTCCGATAGCGAATCCGAGATCGCCTCGAGAAATAATCGTATACAAGTTGCAAGGGTTCCGCCGAGACCGAGAGCACCTCCGCCCACATCGCCGGAGAACAGCGACAGCGACAACAGTCCAGTTCCCAAACTTCAAGAAGAGGACGGTGGAAACGTCCAAGACAAGAAGAAGAGCGACACGTTGCGCAAATTGTTCTCCAGTAGTGGGAAGGGTGCTGGAAAAGGTGGTAAAGGTGGTAAGGGTGGGGGAAAGTGTGGAATCTACGTGGAAGAGTATACGACTTCGGCCAATACTCCCACGGGAAGCGAAAGCCCATACAAGAGACCTTCTTCCCAAACTTCCAGCAGTGCTGTTCTTCCGATACCCCCTATAACTCATGTTAACGGTGTTCCAAGTCTGATATGTAGACTCGATTTGAATAGAATTCCACAGATACATCAACTTGTTCTTTCGAGAGGACAGGAGCTTAGACAACGTACGGAGCTTCCAGATACAAGGCCGGCGTCGAGGTTGCAAGCTACGAGTAGCAGTAGCACTCTCTTGGTTCCTCAACCTCCTACCAGGCCTCCGACGCCCGAGGAAGGAGAGATTATCGACACTCCACCTACGCAAGAGCCTGAAGCCCGAATCCACGGTGCCGCTCGTATAATGAACGACGCTGGAATGAGCTCCACCAAAACCGGAGTGAAAACCGAGGTTGTGTGCGAAGACTCGAAAAATAATATTTTAAGTGGAAGTAGTGTTGTTGCCAATAACGATAGCGGTTCTGGAATTTGTCCCAGTGGTTCCACCGCCACGTATCTTAGTGCGAACAACAGTGCCAATAGTGCGAGTAATGTGATGATGACGGTTCCCAAAAGAAAACGTAATCCCAGTTGCAGTTCCGTTTCGAGTTTGAGTGCCGTCTGTTGTATCGATCCTAAAGTTAAAAATTATTCCGAATATAAAGGAAAGAAGAAGAAAAAGAGAAAACATGCCGATAACGAAGCTATTAACGTACCTCGACCCTCGTCCAGTCAGCAGGTTGATATACAACCCACGAATCACGAGCGGGAAGCAATCTCTGACACAAGTTTGTTGCCTCCTCCACCTCCGCCTCACCGTGTCTACTATTCCTACTTCAACCCTCAAAACGAAGTTTTGGAGGATCAGGATAGGGACCAGAATCAGTACCTGACGGAAGCAAAAAGATTAAAACACAGTGCGGACGAAGAGTGCGAGCTGACTGCACAGGGTATGCTGTACTTGGAGGCCGTTTTGTACTTCCTTCTGACCGGGGATGCAATGGAGTCGGATCATGTCACAGAGAGGGCGTCGTTCACTATGTACAGGGATACCCTCAGCCTCATCAAATACATCTCCTCGAAGTTCAAGAGTCAACAGAACAACTCACCGGAGAGCAGTATACATAACAAGCTAGCCATTCTGAGCCTGTGGTGTCAATCCCTCATATATTTGAAACTCTTCAAAATGCGAAAACACGAGATCAAAGAGTATCAGAAAATTCTTGCCGATTATCATCAAAAGGCCGCGCAAGCGACTACGATACAACCGACCGAAGGTCAAGGGACACCTTCGTTATCTCCAACGCCATCCCCCGCGGGTTCAGTTGGATCCGTCGGTAGTCAAAGCTCTGGTTACAGCAGCGGAGAATTGGCAAATCGAGGAGGAGCCTCTTCCAGCGGCCAACCTCAAACCACTCCTTACGTTAGCGTACCCCTCAATGTTCACAACGCCATGGTGAAACAAAATTATCATTTTGGTTTCCTATTGAACTGTCACGAACTCTGGGATCAAGCGAACGCTTTGGTAACGGAACATCATAGAGATTTCTTCATCGAATTGGACGAGAAGATGGGACCCTTGACTTTGAAAAGTTCGTTGCGTGATCTGGTACGATACGTTCAAGCGGGAATAAAGAAACTCCGAGCCCTTTGA
Protein Sequence
MKKPRVDRDRLRERERQARAAMSVQAEQAAAGGGADTRHHHHGHHNHAHHHANSHTIAAPLFRAPVRVNPDAQDRTTQQIQSKLGNYSLVKQMVLDEPKRLIGIEGVPASPAPSLAPPSSRTSSGSVSSSSRSSPSTQEFKKPGSGPRTGSSSTSSSSTNSSSSSNHSSQRGGFVKPADGKPPYGGRGGYPGQPVKHAGNSNDHRSHGLLPAKGPPPNSSGSSNNSSSISGPNNHNNNRIYSAGVRLTRINVDNGSNSRHLTPENSADLENILKEMTMPPTPLTAIAQTPRKELESKFTFNPVLAKLTEVTPADVVKPQRERHSSNRLSADLIERDLSLSEDSDDDGNKRGGSSSKIPRGNRTPDLTVDLSTPLIPAMTPAPPPLAPMSPMGMSPEGPMMSPSRPLGSPKQTSPVTTSLQTGIKLPPTSLLSPPSRLLTTPPPMAIPKEITPERTLHSSPSLQPPLGVGLPPEPIGKISSPIAHHHHLQRPPSPPGEAPQSSCSASSSSDSGSDTASDSSDDSENEPDQTTMKGPTTPPSISPTTNNVVEEPLPAVEESKPRWNLSSFFNKTAVPHGEQNSESKPVQGGGRREGSSEPASEPKRTLREKNHEWQLDEAVKRTRNATMMSLLIDSEPLPPDREKSQATSENNRERPVIEKPKVPDGRKRGRPRKPNKVISPKENHRTTEDTEKNLSKSRSRSRGFGESPAKKKKPISKPTVPTTSDDDSDERPLDASSDSDSDRRHNPIPPVALRDAVEKRRSRLSVSSSDDEDDVSPPNKRKPSPSGVRDDDASRSWRRVSIKRSKLADSPKKPEKKKSPTKAKPRRPRSRVTSLAGVSDSDSESEIASRNNRIQVARVPPRPRAPPPTSPENSDSDNSPVPKLQEEDGGNVQDKKKSDTLRKLFSSSGKGAGKGGKGGKGGGKCGIYVEEYTTSANTPTGSESPYKRPSSQTSSSAVLPIPPITHVNGVPSLICRLDLNRIPQIHQLVLSRGQELRQRTELPDTRPASRLQATSSSSTLLVPQPPTRPPTPEEGEIIDTPPTQEPEARIHGAARIMNDAGMSSTKTGVKTEVVCEDSKNNILSGSSVVANNDSGSGICPSGSTATYLSANNSANSASNVMMTVPKRKRNPSCSSVSSLSAVCCIDPKVKNYSEYKGKKKKKRKHADNEAINVPRPSSSQQVDIQPTNHEREAISDTSLLPPPPPPHRVYYSYFNPQNEVLEDQDRDQNQYLTEAKRLKHSADEECELTAQGMLYLEAVLYFLLTGDAMESDHVTERASFTMYRDTLSLIKYISSKFKSQQNNSPESSIHNKLAILSLWCQSLIYLKLFKMRKHEIKEYQKILADYHQKAAQATTIQPTEGQGTPSLSPTPSPAGSVGSVGSQSSGYSSGELANRGGASSSGQPQTTPYVSVPLNVHNAMVKQNYHFGFLLNCHELWDQANALVTEHHRDFFIELDEKMGPLTLKSSLRDLVRYVQAGIKKLRAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-