Gfla019821.1
Basic Information
- Insect
- Gonatopus flavifemur
- Gene Symbol
- retn
- Assembly
- GCA_018340375.1
- Location
- Contig1:71729525-71946046[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7 8.7e+03 -2.5 0.1 63 82 206 224 192 226 0.67 2 2 5.6e-26 1.8e-22 79.8 0.0 2 89 231 316 230 316 0.96
Sequence Information
- Coding Sequence
- ATGGAAATGAGCGACGAGTACCAGGATATGGGAAATCCTGGAGGAGGTGTCGCGATGGCTAATATCCCTATGAGTCACCATCGACATACACCAGACAGTCCATTGTCACATCAGGAGGAAGACTTATCAGATCCGGATCTTCAAGATGAGGAGAGTGGAGAAGAGTTACCTCAACAACCACTTCAGGGTAATACACACTCGTCTGCGGATACCACATCAGGAACAGCCAGCACACCTACTCCATTAACACACTTGAACAGTCTCATGAGCACGCATCATCCGCATTTCCTGGCAAAGCTCAGAATGGAGGCTGACACCGACGTCCTAAGCAACAAGAGCGGTTTAGAAGCGCTACAAGCGGCTATGGGTGGTGGCGGTTTCAATCTTCCTTTCTCTTTTCCACCGCCGGCTGCTTTTCTAACGCCACAGCATCACAGTACTCAGAATAGCCATCCTCAGTCAGCTAGCGTAGGTGTTAGCGCCAAAGTAGGCAATAACAATCAGATCGTATCGTCGGCCAGTTCACACTCCAGCGAATCGTCGCAGGGAAGCGGCAGGAATGGTGTCGAACCACGCGAAACTAGCAATCATTCGCAAAGCAACGCTTCAAATGCGAATCATCAACAACAAACCAGCTGGAGCTTCGAAGAGCAGTTCAAACAGTTGTATGAAATCAATGATGATCCCAAACGGAAGGAGTTCCTGGACGATCTCTTCAGTTATATGCAAAAACGAGGGACGCCTATCAATCGATTACCCATAATGGCAAAATCAGTATTGGATTTATACGAGTTGTACAATTTAGTTATTGCCCGTGGTGGTTTGGTTGATGTCATCAACAAGAAACTTTGGCAAGAGATTATCAAAGGCCTCCATTTGCCATCGAGTATCACTTCTGCTGCATTTACCTTACGCACTCAGTACATGAAATACCTCTATCCGTACGAGTGTGAGAAGGAACATTTGTCGACACCCGTTGAACTCCAAGCCGCGATAGACGGTAATAGACGGGAAGGACGTAGAAGTAGCTACGGCGCCTACGCTGGGAGCACAAGCGGCGACGGTATGGTTCAAAGGAATCCACACACGCCCAACTCACTAGCCCTACACGCGCAAATGTCACCACTCTCTTTGGTTACGGCGGTGGCAGCATCAGGTGGTCAACATCACGGGCCACCTCAGTCGTTGGTGAACGGAAGCACCGCACATACACCGCTACCACATCACCCGCATCACCCTCAACATCCCCAAGGACCCTTAGGTCAGCCCTCTAATGCTGGTCCGATCCCTGGTATGGCACCTGCCGAGTTTGAAGCACGCATGGTCGAATACGTGAAATTGTTAAATAAAGAACTGAGGAGCGCAGGAGCTGGTACACCGCCTCCGATGATTCATAGGCAAGGCAGCGCTTCACCTCCCGCCACAACGCCACCTAGGGATGGAGCTTTTAGTGCCCTTGAAATGTCCCGATTAACTCTTTGGAATATGTATAATAATAACACCCTGTACCCTGGAGTGGGTCACCAACCACCTCTTTCTCCACAAACTTCACATTCGCCAGTTCCTCAAGAATCCACTCCAGAGCCACAAAGAGAAGCTCTCGATCTTGGACTCAGATCCTCACCCGCGTCATCATCACCAAATAGACAAAGTCCTCCTTCAACGAGCAGCATACAACCTAAAAGAGAAAAATCCCTCACACCTGGACCTCCCTCGGCCAAAAGGTTACATCCAACTTCAGAAGATGAACACCCCCCAGAAAAAGGTGTTTCTCATTCCCTTGGCACACACATCAAAATCTCTAATCGAGGAGACGGGAGAAAAGGTGATAATTCTTTGGTAGTGAGTATGGAATTGAACGGAGTTATGTATCAAGGTGTTCTTTTCGCTCAAAACGACAGCGAAAATACAACGACAAACACAACAAGCAACAGTAATACAAAAACGTCGCGAAGCATAGTTTCGTGA
- Protein Sequence
- MEMSDEYQDMGNPGGGVAMANIPMSHHRHTPDSPLSHQEEDLSDPDLQDEESGEELPQQPLQGNTHSSADTTSGTASTPTPLTHLNSLMSTHHPHFLAKLRMEADTDVLSNKSGLEALQAAMGGGGFNLPFSFPPPAAFLTPQHHSTQNSHPQSASVGVSAKVGNNNQIVSSASSHSSESSQGSGRNGVEPRETSNHSQSNASNANHQQQTSWSFEEQFKQLYEINDDPKRKEFLDDLFSYMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKEHLSTPVELQAAIDGNRREGRRSSYGAYAGSTSGDGMVQRNPHTPNSLALHAQMSPLSLVTAVAASGGQHHGPPQSLVNGSTAHTPLPHHPHHPQHPQGPLGQPSNAGPIPGMAPAEFEARMVEYVKLLNKELRSAGAGTPPPMIHRQGSASPPATTPPRDGAFSALEMSRLTLWNMYNNNTLYPGVGHQPPLSPQTSHSPVPQESTPEPQREALDLGLRSSPASSSPNRQSPPSTSSIQPKREKSLTPGPPSAKRLHPTSEDEHPPEKGVSHSLGTHIKISNRGDGRKGDNSLVVSMELNGVMYQGVLFAQNDSENTTTNTTSNSNTKTSRSIVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00360694;
- 90% Identity
- -
- 80% Identity
- -