Basic Information

Gene Symbol
dbo
Assembly
GCA_026546565.1
Location
JANSWN010030338.1:1-3653[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-35 2.5e-33 114.7 0.2 1 109 31 137 31 138 0.97

Sequence Information

Coding Sequence
ATGGGCGATACTCTGTTAGGTGATCGTCCACCATCACCGGCTCGATTGTCGCATACATCCGAAAAACATCCAAAGGTCACGCTTACCGAATTGAATACATTACGTCGCCATCGTGAGCTATGCGATGTTGTGCTCAATGTGGGTGGACGTAAAATATTCGCCCATCGTGTCATTTTGTCAGCATGCAGTCCATACTTTCGGGCAATGTTTACCGGTGAACTGGAAGAATCACGTCAAACCGAGGTCACCATACGTGATATCGATGAAAACGCAATGGAATTGCTGATCGATTTTTGTTACACCTCACACATTGTTGTCGAAGAATCAAATGTACAAACACTATTGCCAGCTGCATGTCTACTTCAGCTTGCCGAAATCCAAGATATTTGCTGTGAATTTTTGAAACGTCAATTGGACCCAACAAATTGCTTGGGCATTCGTGCATTTGCCGATACACATTCATGTCGTGAACTCTTACGTATTGCTGACAAATTTACACAACATAATTTCCAAGAGGTCATGGAAAGCGAAGAGTTTCTATTGCTACCCGTTGGCCAATTGGTCGATATTATTTGTAGCGATGAGCTAAACGTACGCTCCGAGGAGCAAGTATTCAATGCGGTAATGGCATGGTTAAAATACAATGTAGCCGATCGTCGACAACATTTGGCCCAAGTACTACAACACGTTCGTTTGCCATTGTTGAGCCCTAAATTTTTGGTCGGTACTGTGGGCTCTGATTTGCTCGTACGTTCAGATGAAGCATGTCGTGATTTAGTCGATGAAGCGAAAAACTATTTACTTCTGCCACAAGAACGACCATTAATGCAAGGTCCAAGAACACGTCCACGAAAACCAACACGTCGTGGTGAGGTTTTATTTGCAGTTGGTGGTTGGTGTTCTGGTGATGCTATTGCATCCGTTGAACGTTTCGATCCACAAACAAATGATTGGAAAATGGTAGCACCAATGAGTAAACGACGTTGTGGCGTTGGTGTAGCTGTACTAAATGATTTACTATATGCAGTTGGTGGCCATGATGGTCAAAGTTATTTAAATAGCATTGAACGCTATGATCCACAAACGAATCAATGGTCCTGTGATGTTGCACCGACAACATCGTGTCGTACAAGCGTTGGTGTTGCTGTACTCGATGGATTTTTATATGCTGTCGGTGGACAAGATGGTGTCCAATGTCTTAATCATGTTGAACGTTATGATCCAAAAGAAAACAAATGGGCAAAGGTTGCACCGATGACAACACGTCGATTAGGCGTGGCTGTTGCTGTTCTTGGTGGATATTTGTATGCAATTGGTGGATCTGATGGACAATGTCCATTGAACACAGTTGAACGTTACGATCCAAGACAAAACAAATGGTGTGCAGTTAGTCCGATGTCAACACGTCGAAAACATTTGGGCTGTGCTGTATTCAACAATTACATATACGCAGTTGGTGGACGTGACGATTGTATGGAATTATCATCAGCTGAACGATTCAATCCGAACACGAATACTTGGAGTCCAATTGTTGCGATGACATCACGTCGAAGTGGT
Protein Sequence
MGDTLLGDRPPSPARLSHTSEKHPKVTLTELNTLRRHRELCDVVLNVGGRKIFAHRVILSACSPYFRAMFTGELEESRQTEVTIRDIDENAMELLIDFCYTSHIVVEESNVQTLLPAACLLQLAEIQDICCEFLKRQLDPTNCLGIRAFADTHSCRELLRIADKFTQHNFQEVMESEEFLLLPVGQLVDIICSDELNVRSEEQVFNAVMAWLKYNVADRRQHLAQVLQHVRLPLLSPKFLVGTVGSDLLVRSDEACRDLVDEAKNYLLLPQERPLMQGPRTRPRKPTRRGEVLFAVGGWCSGDAIASVERFDPQTNDWKMVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWAKVAPMTTRRLGVAVAVLGGYLYAIGGSDGQCPLNTVERYDPRQNKWCAVSPMSTRRKHLGCAVFNNYIYAVGGRDDCMELSSAERFNPNTNTWSPIVAMTSRRSG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00751297; iTF_00179527; iTF_00515650; iTF_01461250; iTF_01431013; iTF_01288264; iTF_00544555; iTF_00523011; iTF_00472417; iTF_00478785; iTF_00495169; iTF_00531009; iTF_00542497; iTF_00616961; iTF_01325729; iTF_00525186; iTF_00528866; iTF_00537570; iTF_00566850; iTF_00573379; iTF_01321251; iTF_00473124; iTF_00550948; iTF_01321988; iTF_00521413; iTF_00832229; iTF_00501862; iTF_00509158; iTF_00511334; iTF_00516326; iTF_00533862; iTF_00558726; iTF_00564710; iTF_00601862; iTF_00553095; iTF_00587463; iTF_00588903; iTF_00593159; iTF_01554023; iTF_00497448; iTF_00556584; iTF_00586024; iTF_00595304; iTF_00598216; iTF_01326472; iTF_00508393; iTF_00519977; iTF_00549609; iTF_00579337; iTF_00475274; iTF_00544554; iTF_00554442; iTF_00561098; iTF_00583018; iTF_01559818; iTF_00535371; iTF_00585259; iTF_00567596; iTF_00569036; iTF_00582316; iTF_00803660; iTF_00806028; iTF_01553292; iTF_01554764; iTF_00476685; iTF_00528109; iTF_00540429; iTF_00557261; iTF_01551789; iTF_01555469; iTF_00510606; iTF_00512782; iTF_00526638; iTF_00534638; iTF_00597422; iTF_01324974; iTF_00495919; iTF_00500367; iTF_00513519; iTF_00538287; iTF_00552367; iTF_01320527; iTF_00479537; iTF_00586737; iTF_00607121; iTF_01548913; iTF_01551057; iTF_00470930; iTF_00506930; iTF_00532434; iTF_00496659; iTF_00509875; iTF_01327955; iTF_00530324; iTF_00572660; iTF_01557620; iTF_01558356; iTF_00482293; iTF_00490837; iTF_00570453; iTF_00576405; iTF_00498934; iTF_00499638; iTF_00519222; iTF_00522230; iTF_00608502; iTF_00609942; iTF_01556182; iTF_01570294; iTF_00502583; iTF_00517047; iTF_00619895; iTF_00547416; iTF_00557976; iTF_00560344; iTF_00545305; iTF_00568313; iTF_00595993; iTF_00901561; iTF_01322713; iTF_01559097; iTF_00506170; iTF_00577114; iTF_01323450; iTF_01324186; iTF_00514235; iTF_00541819; iTF_01327227; iTF_01556891; iTF_00485916; iTF_00546716; iTF_00559548; iTF_00574108; iTF_00802908; iTF_00543805; iTF_00583741; iTF_00584477; iTF_01549629; iTF_00498206; iTF_00616254; iTF_00805246; iTF_01550334; iTF_00518495; iTF_00548863; iTF_00551647; iTF_00562527; iTF_00563231; iTF_00575647; iTF_00589600; iTF_01356192; iTF_01552512; iTF_00581595; iTF_00533153; iTF_00539713; iTF_00550305; iTF_00563969; iTF_00514946; iTF_00566146; iTF_00580034; iTF_00480228; iTF_00531716; iTF_00546020; iTF_00619204; iTF_00615621; iTF_00604902; iTF_00607846; iTF_00612871; iTF_00578600; iTF_00596713; iTF_00504746; iTF_00477387; iTF_00488076; iTF_00539020; iTF_00504046; iTF_00569742; iTF_00594606; iTF_00525935; iTF_00614960; iTF_00475986; iTF_00611410; iTF_00571955; iTF_00505460; iTF_00489431; iTF_00601111; iTF_00590296; iTF_00581594; iTF_00481595; iTF_00536828; iTF_00548124; iTF_00602652; iTF_00486621; iTF_00592445; iTF_00605631; iTF_00483040; iTF_00527360; iTF_00320686; iTF_00320687; iTF_00319763; iTF_00747544;
80% Identity
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