Gbil004338.1
Basic Information
- Insect
- Gnoriste bilineata
- Gene Symbol
- egg_1
- Assembly
- GCA_026546565.1
- Location
- JANSWN010069633.1:4808-10538[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6 1.1e+04 -3.7 0.0 31 43 221 233 218 237 0.76 2 2 2.9e-14 1.2e-10 41.0 0.0 5 75 1288 1351 1285 1353 0.90
Sequence Information
- Coding Sequence
- ATGAGCGACACCGTTGACCCGTCTTATGATGTAGCCGAAGACAGCACAGCCGTCAAAAAGTCTACGAACGTCGTTGACGAGCAGCTGCATGTTTGTGCTCAGTTATCCACACACTTAAACGGTAAAACCATGCCCATAAAAAGTGATAAACAAATTGAAGTGAATATGAACGTTAGCGGTAATGGGATGGAAGATATTGCACTGCTGCAAACGGTTGTAGACATGTCCGTTGCTATGGTGGATTCAGTTGAAGCTTGTGAGAATAAATTGACTAACACCGATACAGACGCAACGACTATTGAAGAAACATTCGATGCTGAAGTGGAAAGGCATAGGCCTGCTATTAAGAAAAGTGGCCATGAAGAGGGAGCATTATTTTTGAATCACAATGAGAAATCCAACAAAGAAAGTCAAGCAAATGGATTAGCGCAAAATGAAAAATATTTGACGGCTGATGCAATTAGTGACATTATAGATCTTTTAGACGACACCATAATAAGTGTTGCAGATAGTGCAGATAGTTTACCAAAGTTAACAAAGGTTGTGTCTGTAGTAAACAACGACGAATCGATGTCGACAGTGATAAGTGAAACAATTTCCAGAAGTCATGAAAAGGAAGATACAATATCTGTTATTCCTGGTAAGGTATTGGCATCGTCCAGTAAAGTTGTGTATGTTAGTCCTTTACAAGATACATTTTCGGTAACTGAAGATTTCGATGTCAGTTCTTTAGAAAAAGTTGAATTGACAAATCAAGTGGTTCGAGATGGCTCTGTCGAACGTATCTGTGAACAAATCCCACTAAGTTATGTCGAAAAAGATGAATTGGCGAGTGAAGAAGTGACGCTCTCCGTCAGTGAAGACGATATACCGAAAGAAGTGACTCCTGCTAGTCATGTAAAAGAAGTTGCATCGGTGAAAGAAGGTGTTAATGTAACTTCCTTGTCAGAAATCGTATTGGGAAGCGAACAAGTTTCGTTAAGTGAAGAAGTAACAATGGTGAGCGGAGCGATACTACACAGACCGATTATGGAAGTCACATCAACTTATATTGGAAAAGACAGTTCGAAGTGTGAAAATAGTACAGAAGAAGATACACTTGAAAGTAATAAACTCTTAGTAGAGCCAGACACAGACGCTTCTCATAAAAAAATTACGAAAAGTCTGACAGACGCAGAAATATCCAGTAATTCTGATGCGGAGGCCACATTAGTGAGTACAGGCGACAATTGCGTGATAAAACTGGCTGACGATGTAGTGGGCATTGGAGTCAATCAAATGAAACCGATAGCAATACATAATGCATCTCTCAGCAGGGATAATTTCGATGAAACGAACGTTCATGAGGCGTTGATTGATGAGAGAAACGGGAGCTGTCTTGGAAAAAAAGTGATTGAATCCTCGGTCATAGGTCAAATAGAAAATACTGAAGGTATTAACGAAAATTTAGTAAAAACAGATCAATGGATAGCAGATAAAATATCTGCAATTTCATTCACCGCTCCTGATGGAGCTATCCCATCTATGCAGGTGAATGCTGGTGAAACAGATGCTATAGAGCTGGTCGAAAATATGGATCCATTGAATTCCAACGAAATTCTAAAGGCCCCAAGCCCAAAGATCATACCCCACGTCGAATCCATTAGCATCTCGGCCGATAATGATGACATAGTTATGTTGGTATCAGATTCCGAAGACGAACCATCCTCTCCACCCTCTGTTACTGAGCCGTTGTCCACTTCAATTGGATCTGAAGCCCAAACTGAAAAACTCACATTCGAACCTGTGGCTGGTCCGAGTGGCCTTCAGTCGGCCACCATTAAGCTGCCCGAAATTGACAACAATGATGTGATCATGCTGGACGACGACGATGATGACGATGAAGTCTGTCCAAAATTACTACCACTACAACCTGTATATTCTGCCATCAAAAAGCTAGACGATGTAGTACCACGCACTGAATCTCCTGTGAATGATCCTATCAACACGCCGCTTGGCGCAATAAACGATCTGATTAAAAGTTCGTTCAATACTTCAGAGTTGCCAACAGCTAGCATGCAAACATTACCAGCAACACCACCGAAAGTCCTCAAAAAGTCGCCCATCAAACGTTCTGCTACAGGGGAAGTGCGCAAGAACCATGAATGTATAAATTTCGAGTGTAACAAACGTCCGACCAACTTCCACAAAGCACAACCCTTCATTCTTAGCCACTTCAAGGTGCCAGTCAAAGCGTCGCGAGCTCAATATATTTGCGACGGCTGCCACGAAGAAGCCCTCACGAAATACGAAGAACTTTGTGGTGGTTTGATGTCGAAGCAGCCGCTTCTAATGTTAAATACTTTAAAACGACCTGATTTGGTTGAAATCCTGGACAGCAGCGACGAAGAAGACAATAGTTGCGTTGCCAAGGTGGAGAAGTCAAGTGTATTGCCCGAGTCTGTACGCAACATGTTCTGCAACGAGTTTGAAAGTGCCCTGAAAACTGTGACCGATTGTTTACAAATGGACCAGCAGCTTGACTGGGCCAAAGAGATTCTGCAACAAAAGATCGATTCCAACAAGCAGGCTTCTGACACGATTTTTGATGAAATGCGTACCATGCAGAAGATGGCCGACAGCATGTATGCTCGCCTATACCGAACGGCCAATCATGTAATCGAAGACTTGCCGCCTCTCGACCTAAACACCAACAAGCCAATGCAGCTGGCTGGCCCTACATATCCACCATTCGGCGAGATTGTTTATCCTCCGGTGGACACGTTAACAATGTACTACAGCGTGCGGCAGAAGCTTCTGGCTCCTTGGATTCCGTCAAAGATGTCAGAACCAATGGAAGCCGTCATTTCAGGCATTAAGACACAATGCTACAAGGTAAAGTTTCTCCGTATGAAAGGCATTCTTGTAAAATGTGTACCGCCCACGAATATGGCTTACGGAACACCACCAAAGGTGCGGCTTCCCGTTGGCACCCGAGTAATTGCACTGTTCCAGATTGGCGCTTTTGGTAACAAAGAAAAACACCGATCGTCTTTCTTTCCTGGCGTTATCGCCGAGCCCCTTCAATCTTATAATCGCTGGCGCTATCTCATCTTCTTCGACGATGGTTACGCACAGTACGTGTCGCCCGACAATGTTAGACTCGTTTGTAAGTCTTCGAAAAACGTGTGGGACGATGTGCATCCTGGCTCCAGTGCTTTCATCCACACTTATCTGATGCAATACAAGACCCAACGTCCAATGGTTCAGGTGAAAAAAGGTCAACGCATGGTGACCGAGTGGAACGGAAAATGGCTATACGCACGTGTAATTGAAATGGACGCTAGTCTTGTACAGATGTTATTTGAGGAGGGCAAGCGCACCGAATGGATTTACCGTGGTTCAACCCGACTGGGACCTCTATTCCGTGAGAAACAAGCACAGAAACACTCAGCTGGCCTAACCAAGCGTAACGAACCGTACGTCGAGTACATGTCGATATCGGAAGAAGGGGGCAATCGGGCTGGTGAGCCCCGAGCAAAAACTTCGCCACCGCCTCCGCCGTCTTTTCCGGAACGATCTACTGTACCAACTCCGCCCGGACCAATTCCGACAGTGATACAAAAACCTACACCACCGGCTGACGAACGACGCACACAGACGGCAAAAAAAAGTTCATCGCTACCGCCACGAAACACCGCTGCAACCCAGCCGACTGTGCAACACATGAACAACTCTACCATCTACGTGGACGAAGATAATCAACCTAAAGGCAAGGTCGTCTACTTCACTGCCAAAAAACACATTCCGACGCGACGTTTTGCGCCGCACCGGTGTGGCCCCAACTGTTTATATACCGTGCGTCACGTCCTCAACTCGTATAGCCCTCTGGCGAAGCCTTTGTTGTCTGGTTGGGAGCGTCAGCTATGTAAGAATCGGGCGCGTAAGTCAGTTATCTATCGGTCACCGTGCGGTCGCCGTCTGCGCGATATGCACGAACTTTACAAGTACTTGGTCGCTACCAAGTGTCCGCTGAACGTTGAAAACTTTTCTTACGATCCACCCGTAATTTGCTTGGCCGAATACGTCATTTCCAGTAACATCATTCATATAGACGTGCCAGATCTGTCTGATGGCCAAGAGAAAATGGCGGTTCAAAGCGTCAACTACTATGACAAATCGATGCCGCCACCATGTGTGTACTCGGCCAAGCGGATACCTACCGAAGGCGTTAATCTGAATCTCGATCCGGAGTTTCTTTGCGGCTGTGATTGCACAGACGGATGTTTGGATAAAGAAAAGTGTCAGTGCTGGCAACTCACTTTGGCCGGTGCCAAATTTGGCAATTCCAACACACCGGCACAAGAAGTTGGCTACGAGTATAAACGACTTCCCGATCCTGTGCCGACCGGTATCTACGAGTGCAACTCGCGATGCAAGTGCAGTAAGACTTGCCTAAATCGTGTTGCACAGCATGGCCTCGAAATGAAGCTACAAGTTTTCAAGACCGGTAACCGTGGCTGGGGTCTACGCTGCCTAAATGACGTTCCCAAGGGTAGCTTCATTTGCGTGTACGCCGGAGATCTACTAACCGAACAAAACGCTAACGAGGCGGGCGACAACTATGGTGACGAATATTTTGCTGAGCTCGATTATATCGAGGTTGTGGAGAATGTAAAGGAGGGTTacgagccggacgtcgttcacgaagacgatgtcgaggaagacgatgatgacgatgaagactacccgcccagacgtggccgaaactcagacgacgacgacgatgaGTTCGTGGCGATCAACGTCAATCCGGCTCCAAGCAGTTCCCATCAGTCGCGGTACAACACGCGCACTAAGCAGAAAAACGACAGCGGCAAAGTTATGACGGGTGACTCTAACGACAACTCGGATGAAGACGACGTAGAAAGGCAGCCCATCAGTTTTATGCCGAACGCCAGCCAGTTGGCATTTGACAACCAGGATCAGAACTCAACGAACAAATACCggtccgtgcgaaagttcttcgggaaaaacgagagctgctacatcatggacgcaaagaagaggggcaacatcgggcgatattttaatcattcctgtgcaccgaatctgtttgtgcaaaacgtattcgtagatacgcacgatctgcggtttccgtgggtggcgttttttgcactgtcttacattcgagccggtacggaacttacgtggaactacaactatgacgtgggtagcgtggctggcaaggttctatactgtgaatgcggatccgagtcttgcagaggacgactgctgtaa
- Protein Sequence
- MSDTVDPSYDVAEDSTAVKKSTNVVDEQLHVCAQLSTHLNGKTMPIKSDKQIEVNMNVSGNGMEDIALLQTVVDMSVAMVDSVEACENKLTNTDTDATTIEETFDAEVERHRPAIKKSGHEEGALFLNHNEKSNKESQANGLAQNEKYLTADAISDIIDLLDDTIISVADSADSLPKLTKVVSVVNNDESMSTVISETISRSHEKEDTISVIPGKVLASSSKVVYVSPLQDTFSVTEDFDVSSLEKVELTNQVVRDGSVERICEQIPLSYVEKDELASEEVTLSVSEDDIPKEVTPASHVKEVASVKEGVNVTSLSEIVLGSEQVSLSEEVTMVSGAILHRPIMEVTSTYIGKDSSKCENSTEEDTLESNKLLVEPDTDASHKKITKSLTDAEISSNSDAEATLVSTGDNCVIKLADDVVGIGVNQMKPIAIHNASLSRDNFDETNVHEALIDERNGSCLGKKVIESSVIGQIENTEGINENLVKTDQWIADKISAISFTAPDGAIPSMQVNAGETDAIELVENMDPLNSNEILKAPSPKIIPHVESISISADNDDIVMLVSDSEDEPSSPPSVTEPLSTSIGSEAQTEKLTFEPVAGPSGLQSATIKLPEIDNNDVIMLDDDDDDDEVCPKLLPLQPVYSAIKKLDDVVPRTESPVNDPINTPLGAINDLIKSSFNTSELPTASMQTLPATPPKVLKKSPIKRSATGEVRKNHECINFECNKRPTNFHKAQPFILSHFKVPVKASRAQYICDGCHEEALTKYEELCGGLMSKQPLLMLNTLKRPDLVEILDSSDEEDNSCVAKVEKSSVLPESVRNMFCNEFESALKTVTDCLQMDQQLDWAKEILQQKIDSNKQASDTIFDEMRTMQKMADSMYARLYRTANHVIEDLPPLDLNTNKPMQLAGPTYPPFGEIVYPPVDTLTMYYSVRQKLLAPWIPSKMSEPMEAVISGIKTQCYKVKFLRMKGILVKCVPPTNMAYGTPPKVRLPVGTRVIALFQIGAFGNKEKHRSSFFPGVIAEPLQSYNRWRYLIFFDDGYAQYVSPDNVRLVCKSSKNVWDDVHPGSSAFIHTYLMQYKTQRPMVQVKKGQRMVTEWNGKWLYARVIEMDASLVQMLFEEGKRTEWIYRGSTRLGPLFREKQAQKHSAGLTKRNEPYVEYMSISEEGGNRAGEPRAKTSPPPPPSFPERSTVPTPPGPIPTVIQKPTPPADERRTQTAKKSSSLPPRNTAATQPTVQHMNNSTIYVDEDNQPKGKVVYFTAKKHIPTRRFAPHRCGPNCLYTVRHVLNSYSPLAKPLLSGWERQLCKNRARKSVIYRSPCGRRLRDMHELYKYLVATKCPLNVENFSYDPPVICLAEYVISSNIIHIDVPDLSDGQEKMAVQSVNYYDKSMPPPCVYSAKRIPTEGVNLNLDPEFLCGCDCTDGCLDKEKCQCWQLTLAGAKFGNSNTPAQEVGYEYKRLPDPVPTGIYECNSRCKCSKTCLNRVAQHGLEMKLQVFKTGNRGWGLRCLNDVPKGSFICVYAGDLLTEQNANEAGDNYGDEYFAELDYIEVVENVKEGYEPDVVHEDDVEEDDDDDEDYPPRRGRNSDDDDDEFVAINVNPAPSSSHQSRYNTRTKQKNDSGKVMTGDSNDNSDEDDVERQPISFMPNASQLAFDNQDQNSTNKYRSVRKFFGKNESCYIMDAKKRGNIGRYFNHSCAPNLFVQNVFVDTHDLRFPWVAFFALSYIRAGTELTWNYNYDVGSVAGKVLYCECGSESCRGRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -