Gbil017580.1
Basic Information
- Insect
- Gnoriste bilineata
- Gene Symbol
- sip1
- Assembly
- GCA_026546565.1
- Location
- JANSWN010066700.1:7578-9856[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4 9.9e+03 -4.0 0.1 54 154 237 252 230 262 0.52 2 2 4e-65 2.7e-61 207.8 1.0 2 203 406 600 405 614 0.96
Sequence Information
- Coding Sequence
- ATGTCCGACAATGAGTACGAGAAGTTTGAGATCAGTGACTACGATTTGGCCAATGAATTCAATCCGAATAGGGCGAGCAGGCGGCCCACAAAGAATCAACAAATCTACGGCATCTGGGCAGACGATGACAGCGACAATGAGGCTACACAATCGTCTTCACGACGAAAGAAAAACATGGGCGGCGGAGGACGTGGTGGCGGTGGTAATGGCAGCGGCAAAAAAAATATGGACTACACAGCACCGGTATCATTTGTGGCCGGCGGAATCCAACAGTCAGGAAAGAAAAAAGACACAGTGGAAGAGAAACAATCCGAAGATGATGAAAACAGCAATTCACCGCGCGCTATAAACGAGCATAACACATCCAGTGAGTCGGAAGATGCGGCACCGACAATGTCCGGCTTTGGTATGGGTAATATGGCTGGGTTCCGAACGGGTAACGCGATGGGTGGTGCAGCAGTGTCGGGAGCCAAATGGGAACAGCATACCAAAGGAATAGGTGCCAAGCTTCTGTTACAAATGGGCTATCAGCCAGGTAAGGGTCTGGGCAAAGATTTACAAGGTATAGCCCAACCGGTCCAGGCACATTTGCGTAAAGGGCGTGGTGCGATCGGAGCGTACGGTCCCGAACAAGGACAAACTATTGGCGACGGAAAATTGGCCAAGCCTAAAATCGACGAAGACGTTAAAGATACGTTAGAGTTCCAAGAGAAAATGAGCCAGTGGCGTAAGACTAGTGAAAAATCGACAAAGAACGCTAAAAACCGGTACTACTACAAGAGCGTGCAAGACGTAATCGATAAAGGCAAACATAAGAGTTACATTCTATCAGATCGAATGAGTACAAAGCTTAGCAATGTCACGGTAATTGATATGACGGGTCCCGAAAAACGAGTACTCAGTGGCTACCATGCACTGGGCCAAACCAAAGCTGCCGAAGAAACTCTTTACGAGCATAGACCTACAAAGAAATGCTCAAATTTTAGTTTGCCCGAACTCATGCATAACTTACAGCTGATAGTTAATATGTGCGAACAGGAAATCATTACCATCGATAAGACGCAGCGATCGTCGAGTGATCAAGAGAAGAGTCTGCGTCACGATAAAGAAAATTTGGTCAAAATCATCGATCTCGAAGAGAACCATTTGGAGACGCTGGAAAAAGCAATGGATCTGGTGCGTCGCTTGACCGAACCCGAAGAACAGCTCACACTTGACATAGCTGCCGAAATATTCATCGAACTTCAAACTGACTTTGCTCCCGAATACAAGGAATTTGGTCTTGGTGATTTGGCGCCAGGTGTTATAACGCCACTCCTAAGCGCTCGATTAGACGGCTGGAATCCATTGGACGAACCGACGCGTAACATCGAATTGCTTAAGCAATGGCGTCGTATTTTGGGTGTCTTCCAAGCCCAGAACCAATCAAACGTATTCGATCCGTACTCAGCACTAGTATGGTCAGGCGTTATGCCATTCATGCGATCAGCTGTTGCAACTTGGAATCCACGTAATCCTGAACCGATGGCCGTTTTATTGGATGCCTGGGCTTCGCTGTTGCCCAGCTGGACGTTGGATAATATTCTGGAGCAGCTGGTACTGCCGCGTATCGTTAATTGCGTTGAAGACTGGGATCCACTGACCGACACCATTGCCGTGCACATTTGGATTCTACCATGGACACGACTGCTTGGCCAAAAGATGCAAGACACCGTTTACCCGAAGATCCGTGACAAACTGGGTAACGCTTTGTGCGCTTGGCAGCCGCACGATCGATCGGCACGTGCCACAATTACTCCGTGCCTAAAACAAATCAAACTTAGTAATCGTGTATATGATACACGATACAAGAAAAAGAACCTTTAA
- Protein Sequence
- MSDNEYEKFEISDYDLANEFNPNRASRRPTKNQQIYGIWADDDSDNEATQSSSRRKKNMGGGGRGGGGNGSGKKNMDYTAPVSFVAGGIQQSGKKKDTVEEKQSEDDENSNSPRAINEHNTSSESEDAAPTMSGFGMGNMAGFRTGNAMGGAAVSGAKWEQHTKGIGAKLLLQMGYQPGKGLGKDLQGIAQPVQAHLRKGRGAIGAYGPEQGQTIGDGKLAKPKIDEDVKDTLEFQEKMSQWRKTSEKSTKNAKNRYYYKSVQDVIDKGKHKSYILSDRMSTKLSNVTVIDMTGPEKRVLSGYHALGQTKAAEETLYEHRPTKKCSNFSLPELMHNLQLIVNMCEQEIITIDKTQRSSSDQEKSLRHDKENLVKIIDLEENHLETLEKAMDLVRRLTEPEEQLTLDIAAEIFIELQTDFAPEYKEFGLGDLAPGVITPLLSARLDGWNPLDEPTRNIELLKQWRRILGVFQAQNQSNVFDPYSALVWSGVMPFMRSAVATWNPRNPEPMAVLLDAWASLLPSWTLDNILEQLVLPRIVNCVEDWDPLTDTIAVHIWILPWTRLLGQKMQDTVYPKIRDKLGNALCAWQPHDRSARATITPCLKQIKLSNRVYDTRYKKKNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -