Gbil010970.1
Basic Information
- Insect
- Gnoriste bilineata
- Gene Symbol
- bab1
- Assembly
- GCA_026546565.1
- Location
- JANSWN010019839.1:271-1648[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-17 5.6e-14 51.8 0.0 1 43 28 71 28 73 0.95 2 2 7.1 8.6e+03 -3.2 0.1 4 11 179 186 177 186 0.85
Sequence Information
- Coding Sequence
- ATGTGGCAAAAATGTTGGAACACCAATCAAAATCTAATTCATCACCTGCGCTTTCGTGAACGTGGACCATTAAAGTCATGGCGACCCGAGACAATGGCCGAAGCCATTTTCAGCGTTCTCAAGGATGGCCTCTCCCTATCACAAGCAGCCCGCAAGTATGACATTCCATATCCGACGTTTGTACTGTACGCCAATCGTGTCCATAATATGCTTGGTCCGTCAATCGACGGTGGCACTGATTTACGGCCAAAAGGTCGAGGTCGGCCCCAGCGTATACTGCTGGGCATTTGGCCAGACGAGCATATCAAAGGAGTGATCAAGACTGTTGTATTCCGTGATGCAAAAGAGTTCAAAGAGGAGAGCATGCATTTGAGCTATGGTCGTCATTCGCCGGTTTATCCATTCCCGGATGGACAAATGGGCTTCCCTGGGGCACAATGTACAAATGGACAGTCACCGGTACCGGGCACTGAATCGCTTTCACCAGAGGCTGCCGCTGCGGTGGCCGCTGTCGTTGGCTTACGTCAGCAAATGCAAATGGCCGCTGCCGTACAGCATCATGCCGATGCTAACTATAATCTTCCAGCACATTGTGCCAACATTCATGGCAATAACGGTGGTTCGGCGGGCACCATTCCAATGCCAAAGCTAGGATCGCCCGCAGCATCTGGCCAAATGGGTAACAATGGCGGCAGTGGCATGCAAATGCCACGGCTGGCATCACCTGCCATGCCCGGCATGTCCAACAACGTAGCTCATAGTTTGGCCGGTATACCTGGCCTACATATCATGCAAGGCATGATGTCCGGTCAATCTAGTCAGGGCGGTGGCGTTACAATTTCACCGGCCCACGGAAATTCCATCAATAGTCAGTCATCCTCCGCACAACAACAACAACAACATCATCATAATACAATGGGCCATCACATCACATCCACCTCGACGGTAAACAATGGTAGTCTAAATATATCGCGTATCTCGTCGCCGACAAATTCGGCGCACGATCTGCGCATGACCAGCCCTGTCGATAGTGAACTTCATTCACCGCTTGGACTGCAATTAGAGTCGGGCGTTAATTTAGCAGTTGGCCACAGTGGTTACAAACAATCACGTGGCTACGGGTCACCAAGATCCGAACATATGTTCCCTGATGATATTAATGATTTTGTGACAGCCGCATCGACACAACGATCGTGTCCATCACGATTGAACAGTTTCAAAGAGCCAGTGGGTGGCATCAAAATGGAACCAATGACCGAGTGCAGAGGCGAGTGA
- Protein Sequence
- MWQKCWNTNQNLIHHLRFRERGPLKSWRPETMAEAIFSVLKDGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKEFKEESMHLSYGRHSPVYPFPDGQMGFPGAQCTNGQSPVPGTESLSPEAAAAVAAVVGLRQQMQMAAAVQHHADANYNLPAHCANIHGNNGGSAGTIPMPKLGSPAASGQMGNNGGSGMQMPRLASPAMPGMSNNVAHSLAGIPGLHIMQGMMSGQSSQGGGVTISPAHGNSINSQSSSAQQQQQHHHNTMGHHITSTSTVNNGSLNISRISSPTNSAHDLRMTSPVDSELHSPLGLQLESGVNLAVGHSGYKQSRGYGSPRSEHMFPDDINDFVTAASTQRSCPSRLNSFKEPVGGIKMEPMTECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00440229;
- 90% Identity
- -
- 80% Identity
- -