Dfer011213.1
Basic Information
- Insect
- Diadocidia ferruginosa
- Gene Symbol
- bab1
- Assembly
- GCA_027564275.1
- Location
- JANSTW010107567.1:796-2135[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-17 8.9e-14 51.7 0.0 1 43 28 71 28 73 0.95 2 2 2.9 8.4e+03 -2.6 4.1 6 26 167 189 165 190 0.87
Sequence Information
- Coding Sequence
- ATGTGGCAAAAATGTTGGAACACAAATCAAAATTTAATACATCACCTGCGATTTCGTGAACGCGGACCGTTGAAATCATGGAGACCCGAAACAATGGCCGAAGCAATTTTTAGCGTATTAAAAGATGGTCTATCATTATCACAAGCAGCCCGAAAATATGACATTCCATATCCGACTTTTGTGCTGTATGCAAATCGTGTGCACAACATGCTGGGACCATCGATTGATGGTGGAACGGATTTACGGCCAAAAGGTCGAGGTCGACCGCAAAGAATTCTGTTGGGTATATGGCCTGATGAACATATTAAAGGAGTTATAAAGACTGTTGTATTTCGTGATGCTAAAGAATTTAAAGATGAAGCGATGCATTTAGCTTATGGAAGACATTCGCCTGTCTATCCATTCCCAGACCAAATGGGGTTTCCGGGTACACCATGCAGTAATGGTTTAGGTTCACAGACACCTGGTTCGGGCACTGAATCATTATCCCCTGAAGCAGCGGCTGCAGTTGCAGCCGTTGTTGGGCTAAGACAACAAATGCAAATGGCCGCTGCGGCACAACATCATCAAGATGGTAGTTATAATCTTCCGGCACATTGTGCAAATATACATACAAATAATGGAGGGTCGGCTGGTTCAATTCCAATGCCAAAGTTAGGCTCACCGGCTGCATCAGGACACTTAGGTAATAATGGTGGTGGTGGAAGTGGTTCACAAATGCCACGTCTAGCCTCACCTGCAATACCGGGCATGCCCAATAATATTGCACATAGCCTAGCCGGTATACCTGGCTTACATATAATGCAAAGTATGATGTCCGGTCAACCTAGTCAAAGTGGAGTTACAATATCGCCAGCTCATTCTGGAAATAGCACTTCAAATACCTCATCAATGCATCATAGTCATCAAAATGCGGCTGCAATGGCACATCATATAACGTCTACGACAACGCTAAACAGCGGCAGTCTTAATATATCACGTATATCATCGCCAGCTAATTCGGCACATGATTTACGCATGACAAGTCCGGATGAAAATCAAATGCATTCACCGCTAGATATGAATATGGAATCGGGGGGAGTAAATTTAGCGGTTGGTGTTAGTGGAATGGCCTACAAACCATCCAGAGGATATTCGCCACCACGTCCAGAGCATTTATTTCAAGAAGATATAACAGATTTTGTGTCAACGCCACGCTCAATGTCGTCGTCCAGAATGAATAGTTTCAAAGAACCAGTTGGTGGCATTAAAATCGAACCAATGACTGAATGTCGGGGTGAGTGA
- Protein Sequence
- MWQKCWNTNQNLIHHLRFRERGPLKSWRPETMAEAIFSVLKDGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKEFKDEAMHLAYGRHSPVYPFPDQMGFPGTPCSNGLGSQTPGSGTESLSPEAAAAVAAVVGLRQQMQMAAAAQHHQDGSYNLPAHCANIHTNNGGSAGSIPMPKLGSPAASGHLGNNGGGGSGSQMPRLASPAIPGMPNNIAHSLAGIPGLHIMQSMMSGQPSQSGVTISPAHSGNSTSNTSSMHHSHQNAAAMAHHITSTTTLNSGSLNISRISSPANSAHDLRMTSPDENQMHSPLDMNMESGGVNLAVGVSGMAYKPSRGYSPPRPEHLFQEDITDFVSTPRSMSSSRMNSFKEPVGGIKIEPMTECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00285352; iTF_00753678;
- 90% Identity
- -
- 80% Identity
- -