Gcor008751.1
Basic Information
- Insect
- Gnatocerus cornutus
- Gene Symbol
- stc
- Assembly
- GCA_029298725.1
- Location
- CM055513.1:8174902-8178182[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2 2.3e+04 -4.7 3.4 6 10 309 313 306 313 0.69 2 14 0.18 2.1e+03 -0.8 0.3 4 10 339 345 338 345 0.95 3 14 7.1e-05 0.82 10.1 16.6 3 18 353 368 352 369 0.93 4 14 1.4e-06 0.016 15.5 17.4 1 18 405 422 405 423 0.96 5 14 0.63 7.3e+03 -2.5 1.0 6 10 453 457 452 457 0.90 6 14 2.1e-10 2.4e-06 27.8 12.1 1 18 463 480 463 481 0.97 7 14 1.8e-07 0.0021 18.4 15.1 4 19 528 543 521 543 0.87 8 14 1.3 1.4e+04 -3.5 2.0 5 10 572 577 572 577 0.93 9 14 0.036 4.1e+02 1.5 12.2 1 11 583 593 583 605 0.90 10 14 4.3e-10 5e-06 26.8 13.9 1 18 610 627 610 628 0.98 11 14 2 2.3e+04 -4.9 1.3 6 10 657 661 657 662 0.55 12 14 0.0058 66 4.0 12.4 1 19 667 684 667 684 0.89 13 14 1.9e-08 0.00022 21.5 14.8 1 19 720 739 720 739 0.97 14 14 0.05 5.8e+02 1.0 15.3 1 18 749 767 749 768 0.90
Sequence Information
- Coding Sequence
- ATGTCGTATTGGGACCCGTACCAAGAGCAGTTGCATGGAGGTTTTCCAATATGTAACGGAGAATATGTACAGTATTATAACAACATGTCCTACTACAATGACCCCAGTCGCGGAAATTACGGTGTCGGAAACTCAGGATACAACCTTTACAATGGGCAATCATACCAGAATAATTATTTGGAAGAAGCAGGACCTAGTCAGGTGACCAGTAATTTCTCTCCAAATCTTGCTAATGAGGATGTCGGGGTGAGTCAATACAATGATTTGAATAGAAACAGCGGAAGTGTCAAGAAGAAGTCAAATGATAGAAATAGATATTGGAATGGGCGAAAAAATGAAAGGTATGGAAGTGGAAGAACTTTTACTAGGACAAGACCTGAAAAACCTGAACAAAGAAGAGTTGAAGCAGATGACGGGAATGGGGACGATGGCAGAGAACCATCTGGAACCAAACCCagaaacaaaataaatcaaaaacagGGGGAAGGGAAGAATAGTTATAATCATTATAATAGGTATAGGAACAGTTATGATGATAGAAGAAGTAATTATAGAGGTAGAGACAATCGTTTTGATTATGATAATAGAAGCTACAATAAATATGGAAAGTCTAATAGTAGAAATTATGAGGGGGGTGACTACGGTGCTAATGGAAGGGATGATCGCTCTAACTGGAGGGCTAACACAGGAAGTCGCAAGTGTAAAAACGTTGAAGATAAGAAGAAATTGGACGCTGCGTCCCAGCGCGAGCGTCTGGAGCAGATGCTCTCCCGCCGCATGCTCGAGTGCCTCGTTTGTTGCGAAAAAATCAAACACACCGATAAAGTCTGGACCTGCGAACAATGCTACCATATCCTCCATTTAAACTGTACTGTTGCTTGGGCCAACTCTTCAAAAGTAGAAAACGGTTGGCGTTGTCCCGCCTGCCAAAACGTCTGCAGTGATATTCCTAAAATCTATACTTGTTACTGCGGTAAAACGCAAGAGCCTCGTCCTGTTCCTGGCGTAGTTCCGCACGCTTGTGGAGAATTATGCGAGAAAGCGCGTCGGGGCTGTGAACATAAATGTACGATTCTTTGTCATCCAGGTCCTTGTCCTGATTGTCATGTGATGGTAGCTAAACCATGCGGATGTGGTGAAACCACGCAAACTGTTAAATGCAGTTCAGATACTGAGATTGTATGTAGCGCCGTTTGTAATAAGACTTTGGGATGTTGCATTCACAAGTGCGAGGAGAAGTGTCACTCTGGAGAGTGTCTACCCTGTGGGAAAAGTCTCCAGCAAATCTGTTTTTGCGGAAAAGTCGGAAGGAAAGTAAAATGCACACGGGAATTCCAAGGAGCAACAACTTACTCCTGTGAAGAGATTTGTGGAAGAACGTTGTCTTGTGGCAACCACAAATGCGAGAAGATTTGTCATGACGGCGATTGCGAAACATGCGAGAGAGATGTAGAGAAGATATTGACGTGTCCTTGTGGAAGAACAATGCTACAGACTGTTAGAAAATCTTGTCTGGATCCTATACCTTGCTGTGATAAAacATGTGCGAAACTCCTCAAATGTGGCCAACCCGCCGCGCCCCACACTTGCAAAGAACCCTGCCATGAAGGCCCCTGTCCCATCTGCCCTCTAACCACCCTCATTCGCTGTAGATGTGGTCATATGGACCGCGAAATTCCATGCAAACAAGTAACCACAAAAGCAGACGATGCTCGCTGCGAGAAAAAATGCACAAAGAAACGCCTCTGTGGCAAACATCGGTGCAATCAGCGCTGCTGCATCGAAGTCGAGCACATTTGTCCCCTCCCTTGTAACCACACCCTGTCATGTGGTCAACATCGCTGTGATCGTACTTGTCACAGTGGGCGGTGCCCTCCTTGCATGGAGACAAGTTTTGAAGAGTTATATTGTGAATGTGGAGCCAACGTTTTGTATCCTCCAATACCTTGTGGCACGAAGCCGCCTGTTTGCAACAATCCCTGCCCCAGGCCACGCCCCTGTGGCCATGAAGTCAACCATTCGTGTCACACGGGGGTGTGTCCTCCCTGTACTGTCTTGTGCAAAAGGTGGTGCTATGGAAAGCATGAGCAGCGGTCAGCTATCCCGTGTTACCAAGAAGATTTTAGTTGTGGGTTACCATGTGGAAAGCCTATGCCATGCGGTTCTCATAAATGCGATAAACCTTGTCACATGGGACCATGTCCCTTGCCGTGTAAGCAAAAATGTTTGATAAAAAGAGCCCAATGTGGCCATCCTTGTGGAGCCCCTTGTCATGATCCCCCATGTCGCGAGAGCTCTTGTAAGCACAGCGTCCAGGTTTCCTGTTTATGTGGCTTGCAAAAAAGCACAAAACCTTGTATTGAATTATCTGATGAGTATAGAGTCATGGAAATGGCTAATTTAAGAGAAAAAATGGCGGACATGATGAAAGACCAATCGGTGGATATCAGCGACATCGTCAATAAACCCAAAAGACCAGGAGTTTTGAAAATTTTGGAATGCAACGAGGAGTGTCGAGTCCTAGAACGCAACCGCCGTCTCGCCATCGGCCTCCAAATCCGCAATCCTGATTTGAGTCAAAAGTTAACACCGCGTTACTCAGACTTCATGCGTGGATGGGCGAAGAAAGATCCCCAATTTTGTCAGAAAATCCACGAGAAGCTGACGGAGCTTGTTCAGTTAGCGAAGCAAAGCAAGCAAAAAAGTCGCTCGTATTCTTTCGAGTCTATGAATAGAGATAAAAGACACTTCGTACATGAATACTGCGAGCACTTTGGATGCGACAGCGCTGCCTACGATATGGAACCCAATAGAAATATCGTAGCGACTGCTTTTAAAGATAAATCATGGTTGCCGAGTATGAGTCTTCTCGAGTTTCTTCAAAGAGAGAACGGACAACGGAAGGTCCCAGGGCCGGTTTTAAGTAAAGGTTTAATTGGGAAATCCGAAAGTGTCGCTTTAAAGTTGCCGGGAAGACCACAGCGGTCCAGCACTCCTCCGGGAGAAACCGTGGATTACTTTGATAACCCCCCAATGTAA
- Protein Sequence
- MSYWDPYQEQLHGGFPICNGEYVQYYNNMSYYNDPSRGNYGVGNSGYNLYNGQSYQNNYLEEAGPSQVTSNFSPNLANEDVGVSQYNDLNRNSGSVKKKSNDRNRYWNGRKNERYGSGRTFTRTRPEKPEQRRVEADDGNGDDGREPSGTKPRNKINQKQGEGKNSYNHYNRYRNSYDDRRSNYRGRDNRFDYDNRSYNKYGKSNSRNYEGGDYGANGRDDRSNWRANTGSRKCKNVEDKKKLDAASQRERLEQMLSRRMLECLVCCEKIKHTDKVWTCEQCYHILHLNCTVAWANSSKVENGWRCPACQNVCSDIPKIYTCYCGKTQEPRPVPGVVPHACGELCEKARRGCEHKCTILCHPGPCPDCHVMVAKPCGCGETTQTVKCSSDTEIVCSAVCNKTLGCCIHKCEEKCHSGECLPCGKSLQQICFCGKVGRKVKCTREFQGATTYSCEEICGRTLSCGNHKCEKICHDGDCETCERDVEKILTCPCGRTMLQTVRKSCLDPIPCCDKTCAKLLKCGQPAAPHTCKEPCHEGPCPICPLTTLIRCRCGHMDREIPCKQVTTKADDARCEKKCTKKRLCGKHRCNQRCCIEVEHICPLPCNHTLSCGQHRCDRTCHSGRCPPCMETSFEELYCECGANVLYPPIPCGTKPPVCNNPCPRPRPCGHEVNHSCHTGVCPPCTVLCKRWCYGKHEQRSAIPCYQEDFSCGLPCGKPMPCGSHKCDKPCHMGPCPLPCKQKCLIKRAQCGHPCGAPCHDPPCRESSCKHSVQVSCLCGLQKSTKPCIELSDEYRVMEMANLREKMADMMKDQSVDISDIVNKPKRPGVLKILECNEECRVLERNRRLAIGLQIRNPDLSQKLTPRYSDFMRGWAKKDPQFCQKIHEKLTELVQLAKQSKQKSRSYSFESMNRDKRHFVHEYCEHFGCDSAAYDMEPNRNIVATAFKDKSWLPSMSLLEFLQRENGQRKVPGPVLSKGLIGKSESVALKLPGRPQRSSTPPGETVDYFDNPPM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00415577; iTF_01410458;
- 90% Identity
- iTF_00415577;
- 80% Identity
- -