Cang006325.1
Basic Information
- Insect
- Cynaeus angustus
- Gene Symbol
- stc
- Assembly
- GCA_030157275.1
- Location
- CM058060.1:18062583-18066019[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.9 2.1e+04 -4.0 1.6 15 19 309 313 308 313 0.81 2 15 0.18 2.1e+03 -0.8 0.3 4 10 342 348 341 348 0.95 3 15 7.1e-05 0.8 10.1 16.6 3 18 356 371 355 372 0.93 4 15 5.6e-09 6.3e-05 23.2 15.0 1 18 408 425 408 426 0.99 5 15 0.64 7.1e+03 -2.5 1.0 6 10 456 460 455 460 0.90 6 15 3.6e-10 4e-06 27.0 11.9 1 18 466 483 466 484 0.97 7 15 1.6e-07 0.0017 18.6 15.0 4 19 531 546 524 546 0.87 8 15 1.3 1.4e+04 -3.5 2.0 5 10 575 580 575 580 0.93 9 15 0.0028 31 5.0 8.3 1 11 586 596 586 598 0.96 10 15 1 1.1e+04 -3.2 1.0 4 10 601 607 600 608 0.68 11 15 4.4e-10 4.9e-06 26.8 13.9 1 18 613 630 613 631 0.98 12 15 1.7 2e+04 -3.9 0.9 6 10 660 664 659 665 0.59 13 15 0.0058 65 4.0 12.4 1 19 670 687 670 687 0.89 14 15 1.2e-08 0.00013 22.2 14.5 1 19 723 742 723 742 0.97 15 15 0.054 6.1e+02 0.9 17.6 1 19 752 771 752 771 0.95
Sequence Information
- Coding Sequence
- ATGTCGTATTGGGACCCGTACGAAGAACAGTTGCATGGAGGTTTTCCAATATGTAACGGAGAATATGTACAGTATTATAACAACATGCCCTATTACAATGACCCTAGTCGCGGAAATTACGGTGTCGTGAACTCGGGATACAACTTTTACAATGGGCAATCGTACCAGAACAATTATTTGGAAGAAGCAGGACCCAGTCAGGTGACGAGTAATTTCTCTTCAAATCCTGCTAATGAGGAAGTCGGGGTGAGTCAATACAATGATTTGAATAGGAATAGCGGAAGTGTAAAGAAGAAGTCAAATGATAGAAGCAAATATTGGAATGGGGGCCGAAAAAACGAAAGATATGGAAGTGGAAGAACATTTACTAGAACAAGACCTGAAAGAACTGAACCAAGAAAAGTTGAAACAGACGACGGGAATGGAGACGATGGGAAAGAACCATCTGGTACAAAACCccgaaataataataaagtaaatcAGAAACAAGGAGAAGGGAAGAATAGTTATAATCATTATAATAGGTATAGAAACAGTTATGATGATAGAAGGAATAATTATAGAGGTAGAGACAATCGTTTTGATTATGATAATAGaagttataataaatatgGAAAGTCTAATAGTAGGAATTATGAGGGTGTTGATTATGGTGCTAATGGTAGGGATGATCGTTCAAACTGGAGAGCAAATACAGGAGGGCGGAAGTGTAAGAATGTTGAAGATAAGAAGAAATtGGATGCCGCATCCCAGCGCGAGCGTCTTGAACAGATGCTGTCCCGTCGCATGCTCGAGTGCCTCGTTTGttgtgaaaaaatcaaacacacTGATAAAGTATGGACCTGTGAACAATGCTACCATATCCTTCATTTAAACTGTACAATTGCTTGGGCCAACTCTTCAAAAGTAGAAAACGGTTGGCGTTGTCCCGCTTGCCAAAACGTATATACTGAAACtcctaaaatttatacttgTTATTGCGGAAAAACCCAAGAGCCTCGTCCTGTTCCTGGCGTAGTTCCACACGCTTGTGGAGAATTATGCGAGAAAGCGCGTCGTGGATGTGAACATAAATGTACTATTCTTTGTCACCCAGGTCCTTGTCCTGATTGTCATGTTATGGTGGCGAAGGCGTGCGGATGTGGTGAAACCACACAAACTGTTAAATGCAGTTCAGATACTGAGATTGTATGTAGCGCTATTTGTAAGAAAACGTTGGAATGCGGTATCCATAACTGTGAGGAGAAGTGTCATCCTGGAGAGTGTCTGCCGTGTGGGAAAAAGCTCCAACAAATTTGTTATTGCGGAAAAGTGGGAAGGAAAGTAAAATGCACACGGGAATTCCAAGGGGCAACGAGTTATTCATGCGAAGAGATTTGTGGAAGAACGTTGTCTTGTGGAAACCATAAATGCGAGAAGATTTGTCATGAAGGAGATTGTGAGGCGTGTGAGAGAGATGTAAAGAAGATAACGACGTGTCCGTGTGGGAAAACTACACTGCAGACGGTTAGAAAATCTTGTCTGGATCCTATACCTTGCTGTGATAAAATGTGTGCGAAACTCCTCAAATGTGGGCAACCTGCGGCACCCCACACTTGCAAAGAATCCTGTCACGAAGGTCCTTGTCCCACGTGCCCCCTAGCAACCCTTATTCGCTGTAGATGCGGACACATGGACCGCGAAATTCCATGCAAACAAGTCACCACAAAAGCAGACGATGCCCGTTGCGAGAAGAAATGCACGAAAAAACGCCTCTGTGGCAAACATCGATGCAATCAACGTTGTTGCATAGAAGTTGAACATGTTTGTCCCCTTCCTTGTAACCACACCCTTTCTTGTGGTCAACATCGCTGTGATCGTACTTGTCACAGTGGGCGCTGCCCTCCGTGCATGGAAACAAGTTTTGACGAGTTATATTGTGAATGTGGGGCCAACGTTCTGTATCCCCCAATACCATGCGGGACGAAGCCACCTGCTTGCAATAATCCCTGCCCTAGGCCACGCTCCTGCGGCCATGAAGTCAACCATTCGTGTCACACGGGGGTGTGTCCTCCGTGTACGGTGCTGTGCAAAAGATGGTGCTATGGGAAGCATGAACAGAGGTCGGCGATTCCGTGTTACCAAGAAGATTTTAGCTGTGGTTTACCCTGTGGCAAGCCTATGCCTTGTGGTGCTCATAAATGCGATAAACCTTGTCACGTGGGACCATGTCCTTTGCCGTGCAAGCAGAAATGTCAAGTAAATAGAAGTCAATGTGGACACCCTTGTGGAGCCCCGTGTCATGAGCCTCCTTGTCGGGAAACTCCCTGTAAGCAGAACGTTCCGGTTTCTTGTTTATGCGGCTTACAGAAAAGCACGAAACCATGTATTGACTTATCTGATGAGTATAGAGTCATGGAAATGGCTAATCTAAGAGAGAAAATGGCGGATATGATGAAAGATCAATCTGTGGATATAAGCGATATTGTCAATAAACCGAAACGACCAAcaatcttgaaaatTTTGGAGTGCAATGAGGAATGTCGCGTATTAGAACGCAACCGTCGCCTCGCCATTGGCCTTCAAATTCGCAATCCTGATCTGAGTCAAAAGTTGACTCCGCGTTATTCAGACTTCATGCGTGGTTGGGCAAAGAAAGATCCTCAGTTTTGTCAAAAAGTCCACGACAAACTAACCGAACTTGTTCAACTGGCAAAACAAAGTAAGCAGAAAAGCCGCTCTTACTCTTTTGAGTCTATGAACAGAGATAAAAGACACTTCGTTCATGAGTATTGCGAACATTTTGGTTGTGACAGTGCCGCATACGACATGGAACCCAACAGAAACATCGTCGCCACtgcttttaaagaaaaatcatgGTTGCCGAGTATGAGTCTTCTAGAGTTTATTCAAAGAGAGAATGGACAAAGGAAGGTTCCAGGTCCTGTTTTAAGTAAAGGTTTAATTGGAAAGTCCGAAAGTGTGGCTTTAAAGTTGTCTGGACGACCGCAACGATCTAGCACTCCTCCAGGAGAAACTGTGGATTACTTTGATAACCCCCCTATGtaa
- Protein Sequence
- MSYWDPYEEQLHGGFPICNGEYVQYYNNMPYYNDPSRGNYGVVNSGYNFYNGQSYQNNYLEEAGPSQVTSNFSSNPANEEVGVSQYNDLNRNSGSVKKKSNDRSKYWNGGRKNERYGSGRTFTRTRPERTEPRKVETDDGNGDDGKEPSGTKPRNNNKVNQKQGEGKNSYNHYNRYRNSYDDRRNNYRGRDNRFDYDNRSYNKYGKSNSRNYEGVDYGANGRDDRSNWRANTGGRKCKNVEDKKKLDAASQRERLEQMLSRRMLECLVCCEKIKHTDKVWTCEQCYHILHLNCTIAWANSSKVENGWRCPACQNVYTETPKIYTCYCGKTQEPRPVPGVVPHACGELCEKARRGCEHKCTILCHPGPCPDCHVMVAKACGCGETTQTVKCSSDTEIVCSAICKKTLECGIHNCEEKCHPGECLPCGKKLQQICYCGKVGRKVKCTREFQGATSYSCEEICGRTLSCGNHKCEKICHEGDCEACERDVKKITTCPCGKTTLQTVRKSCLDPIPCCDKMCAKLLKCGQPAAPHTCKESCHEGPCPTCPLATLIRCRCGHMDREIPCKQVTTKADDARCEKKCTKKRLCGKHRCNQRCCIEVEHVCPLPCNHTLSCGQHRCDRTCHSGRCPPCMETSFDELYCECGANVLYPPIPCGTKPPACNNPCPRPRSCGHEVNHSCHTGVCPPCTVLCKRWCYGKHEQRSAIPCYQEDFSCGLPCGKPMPCGAHKCDKPCHVGPCPLPCKQKCQVNRSQCGHPCGAPCHEPPCRETPCKQNVPVSCLCGLQKSTKPCIDLSDEYRVMEMANLREKMADMMKDQSVDISDIVNKPKRPTILKILECNEECRVLERNRRLAIGLQIRNPDLSQKLTPRYSDFMRGWAKKDPQFCQKVHDKLTELVQLAKQSKQKSRSYSFESMNRDKRHFVHEYCEHFGCDSAAYDMEPNRNIVATAFKEKSWLPSMSLLEFIQRENGQRKVPGPVLSKGLIGKSESVALKLSGRPQRSSTPPGETVDYFDNPPM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00753483;
- 90% Identity
- iTF_00753483;
- 80% Identity
- -