Gcor006791.1
Basic Information
- Insect
- Gnatocerus cornutus
- Gene Symbol
- Hr39
- Assembly
- GCA_029298725.1
- Location
- CM055512.1:2173410-2184406[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.072 8.3e+02 -0.5 1.9 47 102 195 254 118 298 0.58 2 4 2.3e-08 0.00026 20.9 0.1 1 24 380 403 380 420 0.85 3 4 0.011 1.2e+02 2.2 0.0 58 116 411 470 400 485 0.62 4 4 2.2e-73 2.6e-69 235.0 0.1 205 408 511 709 490 709 0.96
Sequence Information
- Coding Sequence
- ATGGCCGCAGACATGAGGTCTCCCAACGTATCCGTCACCCCTATCAACATGGAGCCCCCGTACCCTTCGACCAACTGCGAGGTGGAGCCCCAACGCACCAGGAGCGCGCCACATCCTGGCCTCACCAACGGCGACGTCCTCGACAGTTCGGACGCGGAAGTCGCGCAAATCGACTTCCAATGCGCTGTTAACATGAGACACAAGAAGAAGCGCGATGGGGCGGACGTCCCTCGCCCCATGTCGTGGGAGGGCGAGCTCAGCGACCACGAGCGGGACATGTGCGTCGACGACGACAGCGGATCACAGGTGCCGGAAAACTTGTCGCTCTCTCAGCCCAAATTGAACACCATGGTGGGCCTTGACTCGAAAGAGAGCCCCATTCTGAGGCTAAAACAGCCCCCGATGGGGAACTACTCCATCCACAGCACTCCGAGCAACTCGCCCTTGTTGAGCCAGAGACACCCCGTGACCGGTGTCCCCATCATCAGCCACAAGGACCTAATGCACAAGGCGCTGAACGTCCCGCCGACGCCGAGCCCCGACTCCGCCATCCACTCAGCATACAGTGTGTTCAGTTCGCCGAACCAGAGCCCCTTGACACAAAGACATATCACGCTAACCCCAAATTTGAGCCGGAACAATAGTGATGCGTCGCATTCGAGCTGTTGTAGTTATTCGAGTGTTTCGGTTTCAGTGTCGCCAACGCAACAGTTTTCGCCTACTCACAGTCCTATTCAGggtCGCCATATGCACAGTATTCACAATAGTCCTCTACATCACAACGTATTATACCGAAGTCTCCAAGAAGACCCCAGCGTCCAGTACGGGGACCACGATGGCCTCGACGAGGCCGAAGATAAGACTGGCTTAGTTCATACGTCTTTGCCCGCTCAACCCGGAATATCACGCCAACAACTCATCAACAGTCCGTGTCCGATCTGTGGCGACAAAATCTCCGGTTTCCACTACGGCATCTTCAGCTGCGAGTCGTGCAAAGGTTTCTTCAAACGCACAGTACAAAACCGGAAGAACTACGTCTGTCTGCGAGGCGCCGCCTGCCCCGTCACCGTCGCCACGCGGAAGAAGTGTCCGGCTTGCAGATTCGACAAATGTCTGCAATGCGGGATGAAACTCGAAGCAATACGAGAAGACCGGACAAGGGGTGGAAGATCAACGTATCAGTGCTCTTATTCGTTACCTCCATCGCTGGCGAACCACGCGGAGTTGAGGGCGAGTTCAACGGATTTGAGGCAGAACGTCGGAGACGCGCACCACGGGTTAACTGTGAAGTTGGAACCAGTGGACTCGTCGGGGTCGCATCATAAGCGGGGCACCGTGCCGGGGTCGAAGGGGGTCCCTCCGTTATTGCAAGAAATAATGGACGTGGAGCACCTGTGGCACTACAACGAAATGGAACTAAACAAACTCAATACTGAAGGTCACTTAGGCAAAGAAGGAGGAAGCGGCGCCGTCCATAACCTGTCGAACCACCCCCTTCTAGCCGGGACTGCTTTAGCGGGCTCAACTGACACCAATCCGGACTTTGTAGCGAATTTGTGCAATATCGCCGATCGACGACTCTACAAAATAGTCAAGTGGTGCAAAAGCTTACCACTTTTCAAGAACATATCGATCGACGACCAAATCTGTTTATTGATAAACTCCTGGTGCGAACTCCTCCTCTTCTCTTGTTGTTTCCGCTCCATGGCGACTCCTGGAGAAATCCGCGTGTCGCTCGGGAAGAGCATCACCTTAAACCAAGCCAGAGACATGGGCATGCAAGCTTGCATCGAAAGAATGTTGAATTTTACGGAACAGTTGAGGAGGTTGCGAGTTGATCAATACGAATACGTTGCAATGAAAGTCATCGTGTTACTCACTTCCGACACCTCCGAGTTGAGGGAAGCCGAGAAAGTGAGAGCTTCGCAGGAGAAGGCTCTCAAGGCGCTGCAGGATTACACGCTGAGTCATTATCCCGACAGTCCTGCGAAATTTGGGGAGCTGTTGCTGCGGATTCCCGAATTGCAACGAACTTGCCAGGTGGGGAAAGAGATGTTGACCATCAAGTCGAAGGATGGTGACGGTCCGAGCTTCAATTTACTGATGGAGCTTCTCCGAGGGGATCACTAG
- Protein Sequence
- MAADMRSPNVSVTPINMEPPYPSTNCEVEPQRTRSAPHPGLTNGDVLDSSDAEVAQIDFQCAVNMRHKKKRDGADVPRPMSWEGELSDHERDMCVDDDSGSQVPENLSLSQPKLNTMVGLDSKESPILRLKQPPMGNYSIHSTPSNSPLLSQRHPVTGVPIISHKDLMHKALNVPPTPSPDSAIHSAYSVFSSPNQSPLTQRHITLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHMHSIHNSPLHHNVLYRSLQEDPSVQYGDHDGLDEAEDKTGLVHTSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTVATRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLANHAELRASSTDLRQNVGDAHHGLTVKLEPVDSSGSHHKRGTVPGSKGVPPLLQEIMDVEHLWHYNEMELNKLNTEGHLGKEGGSGAVHNLSNHPLLAGTALAGSTDTNPDFVANLCNIADRRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMATPGEIRVSLGKSITLNQARDMGMQACIERMLNFTEQLRRLRVDQYEYVAMKVIVLLTSDTSELREAEKVRASQEKALKALQDYTLSHYPDSPAKFGELLLRIPELQRTCQVGKEMLTIKSKDGDGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00753059;
- 90% Identity
- iTF_01283426;
- 80% Identity
- iTF_00753059;