Gcor008213.1
Basic Information
- Insect
- Gnatocerus cornutus
- Gene Symbol
- Rel
- Assembly
- GCA_029298725.1
- Location
- CM055512.1:21012900-21019456[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-39 6.9e-36 124.1 1.2 1 168 74 264 74 265 0.92
Sequence Information
- Coding Sequence
- ATGTTGGAGGCAAATGTTAGTTATGTGCCCTCGGTGCGCATCGATATGACCTCGTACCCCAATATTTTGACGCCACCGTCAAGCAGCGAGGACTCGCCACAGTCTGCGTTGTACAGTTCGCCCCCTCAATGTTTCAGTATGCAGGACGCTGGGATTCTGCTTCCGCAGACTTCGCTGGCGTTTGATTTAGATGGGGTGACCCCGGCGAAAGCCCCTTATTTGAAGTTGGTGGAGCAGCCGATTGATCGGTTCCGTTTCCGGTACAAGTCGGAGATGACGGGGACCCATGGGAGTCTCTGTGGACAGACTTCTGACCGGAGCAGGAAGCAGACGTACCCCACAATTGAACTGTGTCATTATAATAAGCGGGCTTTGGTTCGGTGCTCCATCTACCAGCATGGTTACAAGGAAGACCACAGGCCCCACGCCCACAGACTCATTAAGAAGCAAGGAAAGGGGGAAGTTGATGACCCCCATGATGCCTACGTCTCACAAGAAGAGGGTTACGTCTACGTGTTCCACAGCATGGGGGTTATACACACCGCAAAGAAGAACATCGTCCCTGAACTGGTGAGGAAGAAGACACAGTTGAAGAAGGAGGAGGTGGCGAGACATGAGGGCAAAGTGAGAGAATTGACGATAAGAGAGGAAATGGAGATTAAAGGATTCGCTGAGGCTGAAAGCAAATCCATTAATCTGAATGTCGTTTGTTTGCGATTTGACGCTTTTTACGAGAACAATGGTATTCTGCTACCAATATGTCCGCCGGTATATTCGCACTCCATCAATAACTTGAAGAGCGCGCTCACGGGCGAGCTGAAGATCGTCAGAATGGACCACTGCACGGCCCCGGCGAAAGGAGGCCGCGAGATTTTCATGCTGGTGGAACGAGTGACTAAAAAGAATATTAAGATCCGGTTCTACGAAGTCGACGACGAAGACAATCCGATCTGGGAGGCCTTCGGGAAGTTCAGCGATTTGGACGTCCACCACCAGTACGCCATCGTCTTCAAGGTGCCCCCGTACAAAGACCCCAATATTAAGACCCCCGTGAAAGTCCTCATCGAGTTGGAGAGACCGTCGGACCGCGCGCGAAGCGAGCCCAGGGAGTTCACCTACACGGTCGGTTCGAATGTTTATAAGCCGGGGCAGAAACGCGCCAGACCGAGCTATGAAGAGAGCTCCAGTTACGACACTTCGCTCGCCAGTGATGAGCTTCCGGTTCCGATTAATAATTTGTATATTGAGAACTCACCCTTGAACTTGTTGGATAACGCGCAGTTTGATATAACGAGCGCCGAGTTGCAACAGGCGATGACCAACATCAATTCGGATGAGTTCCAGAAGATTTTTAACGATTTCGGGACGGAGTACTCTTTGGCCACGGATGCGCCCTCGCAGAATGTTAAACGCCCGTCGGTGATTAGGAGCAGGTTGGCGGCGATTAGCAAGAAGAGTAAAGTTGGCACCCAACGCTCCGATAGCGTGGAAGAGACGGCCAAAGCGAAACAAGCGGTTCTGGAGCTGCAGAACTTTATAAAAACGCACCCCGTCGACCAGAAGGCCATCGAAATGCTGCGACACTATTTAATGACCGAAGGGAAAACCAACGCTCTCCACGTCTCCATCAAGCAAAACGAGCGCCACGACGTCATGTTCCTCTTGAAGATGGTCTACGTGTACAAACAGTACGACCTGGTGAACGTCCGCAACGAGTCGCTGGAAACCCCACTTCACATCGCCACTTACATGAACTTGGAGGAGATCATCGCGAATTTGGTCGTGTGTAAAGCGGACGTTTCCGTGGTGGATTCCGATATGGACTCGCCGCTTCACACGGCCGTTCTCTGCAATGCCTCCATCGCGATCTTCGAGAAGTTGCTGTCGTCGCAGTGCGCCCCGCAGACCATCGACCTGGAGAACAACGAGGGTAACACGCCCCTCGACCTCGCCATTGAGAACAACAACCTCAAAGCCATCAAACTCCTGTGCATGAAAGGCGCCGACATCAACAAGCAGCACAAGAAGAACGGCTTCACTCCCTTAAGACTCGCCGTGGAGAAGCAGAATCTTGAGATCATCAAGTTCATCCTGCTGCACAAAGATTTGAATCCGATGATCGAGGACTTCCAGGATATCAACCCTCTGCAGGCAGCTCTGAAGAAGGACAATTCCGACCTGTTGGAAGCCATCACCGAATTCATGCGTCTTAACAACTTCGTCGACGTGGAGATCAAAAACGAAATCGAAGATCCTTCAGACGAAGAAGAGTTCGAGGAGAAATTCTCCGTTAAGTTGGAGCAGATTTCCGCAGACGATTTACGGGATATGTATAGCAACGTGAAGAGTTTCACTCAGGACTGTCTGGATGATATTTCGCATATTCTGGACCGGTCGGGAACGTGGCAGAACTTGGCGGATTTGCTGGATTTAGGGCATTTATTGAGGTCGGGACTGTGTGATTCGAACAGTAGTCCGACTAAATTGGTACTGAAGTTGGCTGTTGAGACGAACGGGGACAGTATTCTGCAGATTCGAGACTTTTTGGAGAATTTGGACGAGGTGCAAGCTGTGGAGATCATTGACAATATGGTTAAGTCGCAGTTTGTGTAA
- Protein Sequence
- MLEANVSYVPSVRIDMTSYPNILTPPSSSEDSPQSALYSSPPQCFSMQDAGILLPQTSLAFDLDGVTPAKAPYLKLVEQPIDRFRFRYKSEMTGTHGSLCGQTSDRSRKQTYPTIELCHYNKRALVRCSIYQHGYKEDHRPHAHRLIKKQGKGEVDDPHDAYVSQEEGYVYVFHSMGVIHTAKKNIVPELVRKKTQLKKEEVARHEGKVRELTIREEMEIKGFAEAESKSINLNVVCLRFDAFYENNGILLPICPPVYSHSINNLKSALTGELKIVRMDHCTAPAKGGREIFMLVERVTKKNIKIRFYEVDDEDNPIWEAFGKFSDLDVHHQYAIVFKVPPYKDPNIKTPVKVLIELERPSDRARSEPREFTYTVGSNVYKPGQKRARPSYEESSSYDTSLASDELPVPINNLYIENSPLNLLDNAQFDITSAELQQAMTNINSDEFQKIFNDFGTEYSLATDAPSQNVKRPSVIRSRLAAISKKSKVGTQRSDSVEETAKAKQAVLELQNFIKTHPVDQKAIEMLRHYLMTEGKTNALHVSIKQNERHDVMFLLKMVYVYKQYDLVNVRNESLETPLHIATYMNLEEIIANLVVCKADVSVVDSDMDSPLHTAVLCNASIAIFEKLLSSQCAPQTIDLENNEGNTPLDLAIENNNLKAIKLLCMKGADINKQHKKNGFTPLRLAVEKQNLEIIKFILLHKDLNPMIEDFQDINPLQAALKKDNSDLLEAITEFMRLNNFVDVEIKNEIEDPSDEEEFEEKFSVKLEQISADDLRDMYSNVKSFTQDCLDDISHILDRSGTWQNLADLLDLGHLLRSGLCDSNSSPTKLVLKLAVETNGDSILQIRDFLENLDEVQAVEIIDNMVKSQFV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00414831;
- 90% Identity
- -
- 80% Identity
- -