Basic Information

Insect: Glyphodes pyloalis
Gene Symbol: -
Assembly: GCA_037074685.1
Location: JAYKKO010000024.1:5434264-5459423[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 8.9e-05 0.0085 17.4 2.2 1 23 426 448 426 448 0.97

2 20 0.0046 0.44 12.0 0.6 1 20 454 473 454 476 0.94

3 20 2.3e-05 0.0022 19.3 5.6 1 23 495 517 495 517 0.98

4 20 0.00011 0.01 17.2 4.1 1 23 523 545 523 545 0.99

5 20 3.9e-05 0.0038 18.5 5.3 1 23 551 573 551 573 0.97

6 20 3e-05 0.0029 18.9 8.7 1 23 579 601 579 601 0.97

7 20 7.9e-07 7.6e-05 23.9 2.9 1 23 607 629 607 629 0.97

8 20 0.00011 0.011 17.1 6.7 1 23 635 657 635 657 0.97

9 20 0.0042 0.4 12.1 6.5 1 23 663 685 663 685 0.93

10 20 5.4e-07 5.2e-05 24.4 1.9 1 23 691 713 691 713 0.98

11 20 5.5e-05 0.0053 18.1 7.9 1 23 719 741 719 741 0.98

12 20 2e-05 0.0019 19.5 7.8 1 23 747 769 747 769 0.98

13 20 2.7e-05 0.0026 19.1 5.2 1 23 775 797 775 797 0.98

14 20 3.9e-06 0.00037 21.7 3.5 1 23 803 825 803 825 0.97

15 20 2.6e-05 0.0025 19.1 7.3 1 23 831 853 831 853 0.97

16 20 2.7e-05 0.0026 19.0 6.1 1 23 859 881 859 881 0.98

17 20 6.5e-05 0.0063 17.8 7.9 1 23 887 909 887 909 0.97

18 20 4.8e-06 0.00046 21.4 4.1 1 23 915 937 915 937 0.96

19 20 0.0008 0.077 14.4 0.3 1 23 944 966 944 966 0.96

20 20 0.2 20 6.8 5.0 1 23 974 996 974 996 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	8.9e-05	0.0085	17.4	2.2	1	23	426	448	426	448	0.97
2	20	0.0046	0.44	12.0	0.6	1	20	454	473	454	476	0.94
3	20	2.3e-05	0.0022	19.3	5.6	1	23	495	517	495	517	0.98
4	20	0.00011	0.01	17.2	4.1	1	23	523	545	523	545	0.99
5	20	3.9e-05	0.0038	18.5	5.3	1	23	551	573	551	573	0.97
6	20	3e-05	0.0029	18.9	8.7	1	23	579	601	579	601	0.97
7	20	7.9e-07	7.6e-05	23.9	2.9	1	23	607	629	607	629	0.97
8	20	0.00011	0.011	17.1	6.7	1	23	635	657	635	657	0.97
9	20	0.0042	0.4	12.1	6.5	1	23	663	685	663	685	0.93
10	20	5.4e-07	5.2e-05	24.4	1.9	1	23	691	713	691	713	0.98
11	20	5.5e-05	0.0053	18.1	7.9	1	23	719	741	719	741	0.98
12	20	2e-05	0.0019	19.5	7.8	1	23	747	769	747	769	0.98
13	20	2.7e-05	0.0026	19.1	5.2	1	23	775	797	775	797	0.98
14	20	3.9e-06	0.00037	21.7	3.5	1	23	803	825	803	825	0.97
15	20	2.6e-05	0.0025	19.1	7.3	1	23	831	853	831	853	0.97
16	20	2.7e-05	0.0026	19.0	6.1	1	23	859	881	859	881	0.98
17	20	6.5e-05	0.0063	17.8	7.9	1	23	887	909	887	909	0.97
18	20	4.8e-06	0.00046	21.4	4.1	1	23	915	937	915	937	0.96
19	20	0.0008	0.077	14.4	0.3	1	23	944	966	944	966	0.96
20	20	0.2	20	6.8	5.0	1	23	974	996	974	996	0.99

Sequence Information

Coding Sequence: ATGAACCCTGAACACCATAGTATGAACACGGGTGGTGGCCAGCCTCCTGGAAGTTCGGAGTCTCAGAACCAGAGAGTTCAAACTGCGCAGCAGCAACAGCAGGCAGCTAATTTGCCCGCAACCACCTCTGCGACTGATCTCAGAGTAAATTCGGCAGCGGTGAATGTCGCTTTGTCTAGCGTCGCCAAATACTGGgtgtttacaaatttatttccCGGCCCAATACCTCAAGTATCTGTGTATGGATTGCCGACTGGTGCCAGGATTGAAAATGGGAAACCTGTACAGGATCTTGGACAAACACATGCAAGTATACTCAATGGTGACCCTAACATCATACTGGGTCACCATGGAGGTCAACCACAAGTTACAGTGTCGGCCTCTGGGACTCAGCAAATCCCTGTTTCTCAAATCATAGCCACACAATCAGGACAACAACATGAAGCACTGGTGGCCCACAACCAACAACAAGAGCTTGCGGCTCAACAAGCCACAGCCTCAGCTCAAGTCACAGTCAGTGCAGGCCAGCCCTCTCATCAGCAGGTACCCAATAACCGGGTCGAGTTTGTACAACACCATAACATTGATATGGTAAATCACGTGGGGCATCATTCACAACAACACTTAATGCAGCAGCAACTTATGACCAGTGCACGTCCGGAACACTCGAATCAGCAGATTCAGCTGACAGTCAGCGAGGACGGCATTGTAACGGTAGTGGAACCGGGTGGCGGCAAGCTGGTTGACAAGGAAGATCTTCATGAAGCTATCAAGATGCCCACAGACCATCAAACTCTAACGGTGCACCAGTTGCAGCAGATTGTTGGTCAACAGGTTATGGATAGTGTGGTGCGTATAGAGCAAGCAACAGGCGAGCCTGCGAACATCCTGGTTACACACAATCCAGACGGAACCACCTCCATAGAAGCTAGCGCCGCAGAACAACTGATCGTCAAGGACGAGAAGAGCGTGGCGAACAAGATTGAAACTGCGCAGTATGCTGAAATAAAGGATATGAAAGGCATTGATCTTAagacTGTGGGAACATTAGGCATGGAGGGAGCTGTTGTGAAGATTTCTGGCGCTTCCGAGCATGACCTGCACGCCATGTACAAGGTCAATGTAGAAGATTTATCACAATTGCTGGCCTACCATGAAGTCTTCGGATGTAAATTGAACGCCGACGGGCAGCCGCAGGCAAAGgttataaGTGAAGTTGAAGTAGAGGCAGGAACCAGCACAGCAATGTCTGCAGAGGAATCTTCTCCGGGCCAGCACTCTTGTGACATTTGTGGGAAGATTTTCCAGTTTCGATATCAGTTAATTGTTCATAGACGATATCACGGGGAGAGTAAACCATTTACATGTCAAGTTTGTGGTTCCGCCTTTGCCAATCCGGTTGAATTATCAAGACATGGAAAATGTCATCTTGCCGGAGACCCTGCCGAAAGACACCAGAAGAGGTTGACTCAAGACAAGCCGTATGCTTGCACTACTTGCCACAAGACATTCTCACGGAAGGAGCATCTCGATAACCACGTGCGAAGTCACACTGGGGAGACACCTTACAGATGCGAATTCTGTGCGAAGACGTTCACGCGCAAGGAGCACATGGTGAATCACGTACGGAAGCACACGGGCGAGACGCCGCACCGCTGCGAGATCTGCAAGAAGAGCTTCACCAGGAAAGAGCACTTCATGAACCACGTCATGTGGCATACTGGTGAAACGCCTCATCATTGCCAATTATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAACAAACCATATGAGGTCGCACACAAATGATACGGCGTTCAGATGCGAACTGTGCGGCAAGTCGTTCACCAGAAAGGAACACTTCACCAATCACATTTTGTGGCATACTGGCGAGACGCCGCACCGCTGCGACTTCTGTTCCAAGACGTTCACCAGGAAGGAGCACTTGCTGAACCACGTGCGCCAGCACACGGGCGAGTCGCCGCACCGCTGCATCTTCTGCTCGAAGTCGTTCACGCGACGCGAGCATCTGGTCAACCACCAGCGGCAGCACACTGGGGAGACGCCCTTCCAATGCGGCTACTGTCCTAAGGCTTTCACGAGGAAAGACCATCTCGTGAACCACGTGCGGCAACACACCGGCGAGTCCCCGCACAAATGCTCGTTCTGCACGAAGTCGTTCACGCGCAAAGAGCACCTCACGAATCACGTGCGCCAGCATACGGGCGAGTCGCCGCACCGATGTACGTTCTGCTCAAAGTCCTTCACAAGGAAGGAACACCTCACCAATCATATAAGACAGCACACGGGTGAAACGCCACACAAGTGTTCGTTCTGCCCGCGCGCGTTCTCGCGCAAGGAGCACCTCAACAACCACGTGCGACAGCACACCGGCGACATGCCCTACGCCTGCACTTACTGCAGCAAGACATTCACCAGGAAGGAGCATCTGGTCAACCATGTACGACAACACACAGGCGAGACGCCGTTCAAGTGTACGTACTGCACGAAATCGTTCTCGAGAAAGGAGCATCTGACGAACCACGTGCACCTACACACCGGCGAGACTCCCCACAAGTGCGCGTTTTGCACTAAAACATTCTCCAGGAAGGAGCATTTGACCAATCACGTCAGAATTCACACTGGGGAATCGCCACACCGTTGCGATTTCTGCCAAAAGACGTTTACACGCAAGGAGCACCTGACGAACCATCTGAAACAGCACACGGGCGACAAGCCCCACGCCTGCAAGGTCTGCTCCAAGCCGTTCACTAGGAAGGAGCACCTCGTCACGCACATGAGGTCCCATAGTTGCGGTGAGCGACCGTTTAGCTGCGGTGAATGCGGCAAGTCGTTCCCCCTCAAAGGCAACTTGCTATTCCACGAGAGATCGCACAACAAAGCCTCGGCGCGGCAGTACCGCTGTGATATATGCTCCAAGGAATTCTTATGTAAAGGACATTTAGTATCGCATAGGCGAACACACACAGAGGCGACAGAAAATTCCGGCAGCGCCGATGCGCCGTCAGAGATCGAAGACTGTTCCGAATGTACCAGCAAATGTGACAAAGGGGACACCGAAAGGTCCGAAAGGAAACACGAGATTAGattGTCTACCGATAATCGGCCTGTAGAAAACAGTGTCTCGCAAGCTCAACAAACCAATGCAGCAGTGATGCAAATAACTACACAGCAAGTCCGAAGCGCAAGCGTGACGGGCGGAGCGGCGGGCGCGGCGAGCGTCGCGGCGAGCGTCGCGGCGGGCGCGGCCGCGGCGGCCGGCGCCGGCTCCTTCGCGGCGCAGCACCACTCCGGCGCCGCCATCGCGCACCATCCCGTCACCGTCAACTACTAG
Protein Sequence: MNPEHHSMNTGGGQPPGSSESQNQRVQTAQQQQQAANLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGARIENGKPVQDLGQTHASILNGDPNIILGHHGGQPQVTVSASGTQQIPVSQIIATQSGQQHEALVAHNQQQELAAQQATASAQVTVSAGQPSHQQVPNNRVEFVQHHNIDMVNHVGHHSQQHLMQQQLMTSARPEHSNQQIQLTVSEDGIVTVVEPGGGKLVDKEDLHEAIKMPTDHQTLTVHQLQQIVGQQVMDSVVRIEQATGEPANILVTHNPDGTTSIEASAAEQLIVKDEKSVANKIETAQYAEIKDMKGIDLKTVGTLGMEGAVVKISGASEHDLHAMYKVNVEDLSQLLAYHEVFGCKLNADGQPQAKVISEVEVEAGTSTAMSAEESSPGQHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPAERHQKRLTQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQLCGKKYTRKEHLTNHMRSHTNDTAFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCIFCSKSFTRREHLVNHQRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTFCSKSFTRKEHLTNHIRQHTGETPHKCSFCPRAFSRKEHLNNHVRQHTGDMPYACTYCSKTFTRKEHLVNHVRQHTGETPFKCTYCTKSFSRKEHLTNHVHLHTGETPHKCAFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHLKQHTGDKPHACKVCSKPFTRKEHLVTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKASARQYRCDICSKEFLCKGHLVSHRRTHTEATENSGSADAPSEIEDCSECTSKCDKGDTERSERKHEIRLSTDNRPVENSVSQAQQTNAAVMQITTQQVRSASVTGGAAGAASVAASVAAGAAAAAGAGSFAAQHHSGAAIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01071806;
90% Identity: iTF_01071806;
80% Identity: -