Gpyl015589.1
Basic Information
- Insect
- Glyphodes pyloalis
- Gene Symbol
- e2f7
- Assembly
- GCA_037074685.1
- Location
- JAYKKO010000015.1:543313-544898[-]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.3e-22 2.9e-18 66.3 0.0 1 65 67 133 67 133 0.92 2 3 2 1.7e+04 -3.5 0.0 11 28 139 155 138 157 0.64 3 3 1.1e-16 1e-12 48.5 0.1 1 60 168 248 168 260 0.90
Sequence Information
- Coding Sequence
- ATGTATGAAGATGACAACATTACCTGTACTCCAAAGCGATACGCGCTTACAGAAGTTACGAACTCGACCAACTATGTGTCGCCGAATGCTAACCTCAAGTTGCTAACCAATGTCGCGTTGCAAGAGAATGATTTTGTAAATTACAATGTCTACAACGCTTCGCCGTATCCGACTCCGCCACCGAGTACTGTTCACCGAAAAGAAAAATCTCTTCAAATATTATGTGACAGATTCTTGGAACTCTATCCTCTCTATGGAAATGGGACTGTGGAAATACAATTGGACAGCACAGCGGCTCAGTTGGGAGTGGAGAAACGGAGGATGTatgacattataaatattttagaagcAATCCAGTGTGCTGTGCACAGAAGGAAAAACACTTATCTTTGGTATGGAGGGTCAAGACTGAATTCTTTCTTGAAGATGCTGAAGAAAGAAGGAGAAAATCTCAAATTGTCAGATGCCCTACGTGGAAGGGCCCCAAAGCCACCAGCACCTAAACACAAAACTTTGGGGGTCATGGCACAAAGATTCTTAATGTTGTTTTTAGTGGAACCACCTAATAAATGTATTAATCTGGAAATGGCTGTCAGAGTCCTCATTGACACATCCAACAAGAACAAAGCAGCTCTCTCACCTGAACAGCAGGATCGCCAGCACAAGTCAAAAGTGAGAAGGCTATATGATATAGCTAATGTTTTCATTTCAGTTGGTCTCATAGAAAAGGTTTCTGGTAATAACACTGTGTTGAAAAAGCCAGTGTTCAAATATGCAGGGCCACTTAAAACGAAAAAGTCTGAACTAGTAATTGTGGAAACTCCTCCCATTACACCACTCACTGTGTTTAACGCACAGAGATCTCCTAATTCGCATGTGTTTGCTGGAAAGTCAAAACGTAAGTTAGAATTCACGACTCCACATGCCAGCAATGAACCGAAACTTGACTTGACCAGCTCACCTGACACTCCGACGCAGAAGTGGGATGAAATCTTGCTTGTAGCTGACATggaacttaataaaattaataatcacaTAGTATTGTGA
- Protein Sequence
- MYEDDNITCTPKRYALTEVTNSTNYVSPNANLKLLTNVALQENDFVNYNVYNASPYPTPPPSTVHRKEKSLQILCDRFLELYPLYGNGTVEIQLDSTAAQLGVEKRRMYDIINILEAIQCAVHRRKNTYLWYGGSRLNSFLKMLKKEGENLKLSDALRGRAPKPPAPKHKTLGVMAQRFLMLFLVEPPNKCINLEMAVRVLIDTSNKNKAALSPEQQDRQHKSKVRRLYDIANVFISVGLIEKVSGNNTVLKKPVFKYAGPLKTKKSELVIVETPPITPLTVFNAQRSPNSHVFAGKSKRKLEFTTPHASNEPKLDLTSSPDTPTQKWDEILLVADMELNKINNHIVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01281098; iTF_01279979; iTF_01279057; iTF_00075251; iTF_00076244; iTF_01282013; iTF_00074270; iTF_00347314; iTF_01125236; iTF_01124393; iTF_00960726; iTF_01071430; iTF_00364704;
- 90% Identity
- iTF_00408188;
- 80% Identity
- -